ID: mmu-mir-7069
GENE: Farsla(10)
chr8:87391768-87391957+


(1)
AGO.mut 		(2)
AGO1.ip 		(11)
AGO2.ip 		(2)
AGO3.ip 		(7)
B-CELL 		(22)
BRAIN 		(6)
CELL-LINE 		(2)
DCR.mut 		(3)
DGCR8.mut 		(10)
EMBRYO 		(10)
ESC 		(6)
FIBROBLAST 		(2)
KIDNEY 		(6)
LIVER 		(1)
LUNG 		(4)
LYMPH 		(20)
OTHER 		(6)
OTHER.mut 		(4)
PIWI.ip 		(1)
PIWI.mut 		(7)
SKIN 		(8)
SPLEEN 		(22)
TESTES 		(3)
THYMUS 		(1)
TOTAL-RNA

Sense strand
CACCCTAGGCCACCTCATGGGTGTGCTGAGGGAGTTCTTCACCAAGCTGGGTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTACAGGAATCACGCAGTTGCGCTTCAAACCAGCCTACAACCCCTACACAGAGCCC
....................................................................................((((((..(((.((((((...((((.....))))..)))))).))).)))))).....................................................
..............................................................................79...........................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT4()
Testes Data. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206940(GSM723281)
other. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073955(GSM629281)
total RNA. (blood)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
......................................................................................................................CCTGCCCTGCCAACCCCTACA...................................................21159.0059.00-17.00-7.004.001.009.006.00------------------------2.00----1.00----1.00-1.00---2.00--1.00---1.00-----2.00--------1.00------1.00---------------1.00--1.00--------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAG..................................................22149.0049.00-6.006.007.001.001.00-2.00-2.001.00-------6.00--------1.00-3.00--1.00-----1.001.00--1.001.00--1.00-------------1.00--------------1.001.00---------------------------------1.00-------1.00-----------1.00-1.00--
......................................................................................................................CCTGCCCTGCCAACCCCTACAGT.................................................23145.0049.00-8.009.005.00---2.00-1.004.00-1.00--------------1.00-1.00------------1.00--1.001.00----1.00----------1.001.00--1.00-----1.00-------1.00-1.00-----------------------1.00---------------1.001.00-----------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTACAG..................................................90138.0038.0038.00--------------------------------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACAC....................................................................................23126.0026.00--------5.001.00-1.001.001.00-----2.00-1.001.001.001.00--1.00--1.001.00----1.00----2.00--1.00---------1.00-------------------1.00--------------------1.00-------------------1.00-------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACACT...................................................................................24117.0017.00--1.00------2.001.004.00-1.00--------------1.00--1.00----1.00--1.00-------1.00------1.00-------1.00---------------------------------------------------------1.00--------------
...................................................................................TTGGGGGCCTGGGAGGGTGAC......................................................................................21117.0017.00--1.00-1.001.00---1.00------3.003.00-1.00-----1.00-1.00--1.00-------1.00--1.00-------1.00-------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACAC....................................................................................24114.0014.00-----1.00---1.001.00---1.00--------1.00--------1.00----------------1.00-------------------1.00--------1.00----1.00------1.00---1.00---------------------------------1.00----1.00-
..................................................................................TTTGGGGGCCTGGGAGGGTGACACT...................................................................................25113.0013.00-----------1.001.00--2.00---1.00---1.00------1.00---2.001.00-1.00---------------------1.00----------------------------------------1.00----------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGA.......................................................................................20112.0012.00-----3.00----1.00--1.00--1.00---1.00----1.00--1.00----------1.00-------------------------------------------------------------1.001.00--------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAGA.................................................23112.0049.00-3.001.00--------1.00-----------------1.00------1.00---3.00-------------------------1.00----------1.00---------------------------------------------------------
....................................................................................TGGGGGCCTGGGAGGGTGACACT...................................................................................23111.0011.00-----1.00--1.00---1.00---------------1.00--------1.001.00-------1.00------1.00---------------------------------1.00----------1.00---------1.00--------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGAC......................................................................................22110.0010.00-----1.00-------------2.00-2.00-------------1.00-------1.00--------1.00-----1.00----------------------1.00-----------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACT...................................................21110.009.00-3.001.002.003.00--1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACA.....................................................................................22110.0010.00----1.00---------2.00------1.00-1.00-1.00-1.00--------------------1.00---1.00--------------------------------------------------------1.00-------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTAC....................................................2019.009.00-3.00--1.001.00-1.00-----1.00-----------------------------------------------------1.00--------1.00----------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACT.....................................................................................2217.0017.00--------------------5.00-----1.00-----------------1.00------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACA.....................................................................................2316.006.00---------3.00-1.00----------1.00----------------------------------------------------------------------------------------------------------1.00-----
....................................................................................TGGGGGCCTGGGAGGGTGACAC....................................................................................2215.005.00----1.00---------1.00------1.00-------------------------------------------------1.00-------------------1.00-------------------------------------------
.................................................................................GTTTGGGGGCCTGGGAGGGTGACAC....................................................................................2515.005.00------------------------4.00--------------------------------------------------------------------------1.00-----------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGA.......................................................................................2114.004.00------------1.00---1.00-----1.00---------------------------------------------------------------------------------1.00------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGT.......................................................................................2014.001.00-------------1.00-------1.00-----------2.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTACA...................................................8914.004.004.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................TGGGGGCCTGGGAGGGTGACACTA..................................................................................2414.0011.00------3.00--------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTACAGA.................................................9114.0038.004.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAAA.................................................2313.0059.00-1.00----------1.00----------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACT.....................................................................................2313.0010.00-----------------------1.00----------------------------------------------------------------------------------------------------1.001.00---------
...........................................................CGAGCCAGCACAAGCAG..................................................................................................................1713.003.00--------------------------------------------------3.00------------------------------------------------------------------------------------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTAC....................................................8813.003.003.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACACTA..................................................................................2613.0013.00-----------------3.00---------------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACAT....................................................................................2313.0010.00----1.00-----------------------------1.00------------------1.00---------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGAT......................................................................................2212.004.00-----1.00--------------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................GGGGGCCTGGGAGGGTGACACT...................................................................................2212.002.00-----1.00------------------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAGAT................................................2412.0049.00-----------------------------------------------1.00-----------------------1.00---------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGAAA.....................................................................................2312.004.00--------------------------1.00------------------------------------1.00-----------------------------------------------------------------------
.................TGGGTGTGCTGAGGGAGTTCTTC......................................................................................................................................................2312.002.00--------------------------------------------------------2.00------------------------------------------------------------------------------
....................................................................................TGGGGGCCTGGGAGGGTAAA......................................................................................202.000.00--------2.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................GTTTGGGGGCCTGGGAGGGTGAC......................................................................................2312.002.00----------------------1.00-----------------------------------------1.00----------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACACTT..................................................................................2512.0017.00--1.00--1.00---------------------------------------------------------------------------------------------------------------------------------
...................................TCTTCACCAAGCTGGGAATC.......................................................................................................................................202.000.00-----------1.00--1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................GTTTGGGGGCCTGGGAGGGTGACT.....................................................................................2412.002.00---------------1.00---------------------------------------------------------------------------------------------------------1.00-------------
....................................................................................TGGGGGCCTGGGAGGGTGACA.....................................................................................2112.002.00-------------------------1.00--1.00----------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACACTA..................................................................................2512.0017.00--------------------------------------1.00------------------------------1.00-----------------------------------------------------------------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTACCG..................................................9012.003.002.00--------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CTGCCCTGCCAACCCCTACA...................................................2012.002.00-2.00-------------------------------------------------------------------------------------------------------------------------------------
................................AGTTCTTCACCAAGCTGG............................................................................................................................................1812.002.00--------------------------------------------------------------------------1.00----------------------------------------------------1.00-------
....................................................................................TGGGGGCCTGGGAGGGTGA.......................................................................................1921.501.50--------0.50-------------0.50-------------------------------------------------------0.50--------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACCAA.................................................2311.009.00--1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGATT.....................................................................................2211.0012.00--1.00------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACTAA.................................................2311.009.00---------------------------------------------------------------------------------------------------------------------1.00-----------------
.................................................................................GTTTGGGGGCCTGGGAGGGTGA.......................................................................................2211.001.00----------------------------------------------------------------1.00----------------------------------------------------------------------
..........................TGAGGGAGTTCTTCACCAAGCTGGGAA.........................................................................................................................................271.000.00--------------------------------------------------------------------------------------------1.00------------------------------------------
....................................................................ACAAGCAGGCAGTGTGTTC.......................................................................................................191.000.00--------------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACAAAA..................................................................................2511.0010.00----------------------------1.00----------------------------------------------------------------------------------------------------------
.............CTCATGGGTGTGCTGAGGGAGTTCT........................................................................................................................................................2511.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------
..............TCATGGGTGTGCTGAGGG..............................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------1.00---------------------------------------------
.....................................................................................GGGGGCCTGGGAGGGTGAC......................................................................................1911.001.00--------1.00------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACTGT.................................................2311.009.00--1.00------------------------------------------------------------------------------------------------------------------------------------
...................GGTGTGCTGAGGGAGTTCT........................................................................................................................................................1911.001.00---------------------------------------------------------------------------------------------------------------1.00-----------------------
...................................................................................TTGGGGGCCTGGGAGGGTGAA......................................................................................2111.0012.00--------1.00------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTAT....................................................201.000.00------------------------------------------------------------------------------------------------------------------------------1.00--------
....................................................................................TGGGGGCCTGGGAGGGTGG.......................................................................................191.000.00--------1.00------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAA..................................................2211.0059.00-----------------------------------------------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................TTCAAACCAGCCTACAACCCCTACACA......2711.001.00-----------------------------------------------------------------------------------------------------------------1.00---------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACCCAG..................................................................................2511.0017.00-------------------------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGAAT.....................................................................................2311.004.00--------------------------1.00------------------------------------------------------------------------------------------------------------
...................................TCTTCACCAAGCTGGGAA.........................................................................................................................................181.000.00-------------------------------1.00-------------------------------------------------------------------------------------------------------
................................................................................TGTTTGGGGGCCTGGGAGGGTGAC......................................................................................2411.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTCC....................................................2011.001.00----------------------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACTTT.................................................2311.009.00----1.00----------------------------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGTAA.....................................................................................2211.001.00-------------------------------------------------1.00-------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAAAT................................................2411.0059.00-------------------------------------------------------------------------------------1.00-------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACTA....................................................................................2411.0010.00--1.00------------------------------------------------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGAA......................................................................................2211.004.00-----------------------------------------------------------------------------------------------------------------------------------1.00---
..................GGGTGTGCTGAGGGAGTTCT........................................................................................................................................................2011.001.00-------------------------------1.00-------------------------------------------------------------------------------------------------------
....................................................................ACAAGCAGGCAGTGTGTTT.......................................................................................................191.000.00-------------------------------------------------------------------------1.00-------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTG........................................................................................2011.001.00----------------------------------------------------------------------------------------1.00----------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTG........................................................................................1911.001.00-------------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGAAAA....................................................................................2411.004.00-----------------------------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................GGGAGGGTGACACTGAGGTGTG...........................................................................221.000.00------------------------------------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................GTTGCGCTTCAAACCAGCCTACAACCCC............2811.001.00--------------------------------------------------------------------1.00------------------------------------------------------------------
..................GGGTGTGCTGAGGGAGTT..........................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------------------------1.00----------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAGAA................................................2411.0049.00----------------------------------------------------------1.00----------------------------------------------------------------------------
....................................................................................TGGGGGCCTGGGAGGGTA........................................................................................181.000.00--------------------------1.00------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACACAAT.................................................................................2611.0026.00-------------------------------------------------------1.00-------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACAA....................................................................................2311.0010.00---------------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................GGGGGCCTGGGAGGGCGA.......................................................................................181.000.00-------------------------------------------------------------------------------------------------------1.00-------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCCA.....................................................191.000.00---------------------------------------------------------------------------1.00-----------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGAAAT....................................................................................2411.004.00----1.00----------------------------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTAAA......................................................................................211.000.00---------------------------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACATT...................................................................................2511.006.00----------------1.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAT..................................................2211.0059.00-----------------------------------------------------------------------------------------------------------------------1.00---------------
....................................................................................TGGGGGCCTGGGAGGGTGACACA...................................................................................2311.005.00-------------------------------------------------------------------------------1.00-------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACACA...................................................................................2411.0026.00-----------------------------------------------------------------------------------------------------------1.00---------------------------
....................................................................................TGGGGGCCTGGGAGGGTGACAT....................................................................................2211.002.00---------------------------------------------------------------------------------------------------------1.00-----------------------------
.................................................................................GTTTGGGGGCCTGGGAGGGTGACA.....................................................................................2411.001.00-------------------------------------1.00-------------------------------------------------------------------------------------------------
....................................................................................TGGGGGCCTGGGAGGGTGACAAA...................................................................................2311.002.00----------------------1.00----------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACTA..................................................2211.009.00-------------1.00-------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAGTT................................................2411.0049.00-------------------------------------------------------------------------------------------------1.00-------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAC..................................................2211.0059.00------------------------------------------------------------1.00--------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCTTAT....................................................201.000.00--------------------------------------------------------------------1.00------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACAA....................................................................................2411.006.00-------------------------------------------------------------------1.00-------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGACACAT..................................................................................2511.0026.00--1.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCC.......................................................8511.001.001.00--------------------------------------------------------------------------------------------------------------------------------------
.................................................................................GTTTGGGGGCCTGGGAGGGTGACACT...................................................................................2611.001.00-----------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTACAC..................................................9011.004.001.00--------------------------------------------------------------------------------------------------------------------------------------
...................................................................................TTGGGGGCCTGGGAGGGTGAAT.....................................................................................2211.0012.00-----------------------------------------------1.00---------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACAAAAT.................................................................................2711.006.00--------------------------------------------------------------------------------------------------------------------1.00------------------
..................................................GTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAA...........................................................8111.001.001.00--------------------------------------------------------------------------------------------------------------------------------------
................ATGGGTGTGCTGAGGGAGT...........................................................................................................................................................1911.001.00------------------------------------1.00--------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACACA.................................................2311.0059.00-1.00-------------------------------------------------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGGTGACAAAT..................................................................................2611.006.00------------1.00--------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAAGA................................................2411.0059.00------------------------------------------------------------------------------------1.00--------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTT.....................................................1911.001.00-----------------------------------------------------------------1.00---------------------------------------------------------------------
..................................................GTGAGCAGTCGAGCCAGC..........................................................................................................................1811.001.00----------------------------------------------------------------------1.00----------------------------------------------------------------
....................................................................................TGGGGGCCTGGGAGGGTGACT.....................................................................................211.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCT......................................................1811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGCCCTGCCAACCCCTACAAT.................................................2311.0059.00----------1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................TGGGGGCCTGGGAGGGTGAT......................................................................................2020.501.50-----0.50---------------------------------------------------------------------------------------------------------------------------------
..................................................................................TTTGGGGGCCTGGGAGGG..........................................................................................1820.500.50--------------------------------------------------------------------------------------------------------------------------------------0.50

Antisense strand
CACCCTAGGCCACCTCATGGGTGTGCTGAGGGAGTTCTTCACCAAGCTGGGTGAGCAGTCGAGCCAGCACAAGCAGGCAGTGTTTGGGGGCCTGGGAGGGTGACACTGAGGTCATCAGCCTGCCCTGCCAACCCCTACAGGAATCACGCAGTTGCGCTTCAAACCAGCCTACAACCCCTACACAGAGCCC
....................................................................................((((((..(((.((((((...((((.....))))..)))))).))).)))))).....................................................
..............................................................................79...........................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		mjTestesWT4()
Testes Data. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206940(GSM723281)
other. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR038741(GSM527276)
small RNA-Seq. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073955(GSM629281)
total RNA. (blood)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
.......................................................................................................................................................................CCTACAACCCCTACAGCCA.... 192.000.00---------------------------------------------2.00-----------------------------------------------------------------------------------------
....................................................................................................................................................CAGTTGCGCTTCAAACCAGCCTACAAA............... 272.000.00---------------------------------------------------------2.00-----------------------------------------------------------------------------
..................................................................GCACAAGCAGGCAGTACTT......................................................................................................... 191.000.00---------------------------------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................CAGCCTACAACCCCTCAT........ 181.000.00------------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................GAGGTCATCAGCCTGCCTGA............................................................... 201.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CCAGCCTACAACCCCCGG......... 181.000.00-------------------------------------------------------------------------1.00-------------------------------------------------------------