ID: mmu-mir-7027
GENE: Ube3b(13)
chr5:114854349-114854598+


(2)
AGO1.ip 		(17)
AGO2.ip 		(2)
AGO3.ip 		(3)
B-CELL 		(31)
BRAIN 		(7)
CELL-LINE 		(1)
DCR.mut 		(3)
DGCR8.mut 		(9)
EMBRYO 		(7)
ESC 		(3)
FIBROBLAST 		(2)
HEART 		(2)
KIDNEY 		(2)
LIVER 		(1)
LUNG 		(3)
LYMPH 		(12)
OTHER 		(4)
OTHER.mut 		(1)
PANCREAS 		(6)
SKIN 		(1)
SPLEEN 		(15)
TESTES 		(1)
THYMUS 		(4)
TOTAL-RNA 		(1)
UTERUS

Sense strand
AGCTGCTCCCGAGACTGGCAGAGTGGAGCCTGGCGCTTGAGAGCATCTGTCCAGTGTCAGCTGCCCCTGCTGTTGTGGCTCTCCGTGCTCACACCTTCTCTCGCGGGCTGGTTTAAGTGGTGTGCTTTTCCCCTGGAAAGGAAGAAACAGCAGAGCAGCTGGGGTCCCTACATGAAGCTCGGGTTTCTCTCCTCTTCCAGGTCTTACGTACCTGGATGACCTGCTGCCCAAGCTCTGGGCGTTTATCTGT
....................................................................................................................................((((((((((((((((....((((....((....))........))))..)))))).)))).))))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR206940(GSM723281)
other. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR073954(GSM629280)
total RNA. (blood)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR553582(SRX182788)
source: Brain. (Brain)		mjTestesWT3()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR206942(GSM723283)
other. (brain)		SRR206941(GSM723282)
other. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		mjTestesWT4()
Testes Data. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR037937(GSM510475)
293cand2. (cell line)		SRR206939(GSM723280)
other. (brain)		mjTestesWT1()
Testes Data. (testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR073955(GSM629281)
total RNA. (blood)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGT.................................................23151.0017.00--2.00--1.003.002.00-1.00-5.002.00-3.001.001.002.00--1.003.00-----1.00---2.001.00----2.00--2.001.001.00------1.00---1.00-1.00----1.00----1.001.00-1.00-1.00------1.00--1.00------------1.00-1.00--1.00------1.00-----
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGAGC..............................................................................................23130.0030.00--2.004.00-2.00-1.003.002.00---4.002.001.00------4.00--3.00------------------------1.00--------------------------------------1.00---------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAG..................................................22117.0017.0013.00---1.00-------1.00----1.00---------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGTT................................................24110.0017.00------3.002.00---------------1.00------------1.00------------1.00-----------------------1.00------------------1.00------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAGAGC..............................................................................................24110.0010.00--1.002.00-----1.00----------------1.00-1.00-----1.00---------1.00--------------------------------------1.00-------------1.00-------------
......................GTGGAGCCTGGCGCTAAAC.................................................................................................................................................................................................................1910.000.00-3.00--4.00----------1.00------------------------------1.00-----------------------------1.00----------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGA.................................................2318.0017.00-----1.00--1.001.00---------2.00---1.00--------1.00------------------------------1.00-----------------------------------------------
......................GTGGAGCCTGGCGCTAGAC.................................................................................................................................................................................................................198.000.00-2.00--2.00--------1.00--2.00-----------------------------1.00----------------------------------------------------------------
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGAG...............................................................................................2217.007.00------1.00-1.00---2.00-----------------------------------1.00-------------1.00--------------------------------------1.00---------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAGAG...............................................................................................2316.006.00--2.00------1.00--2.00-------------------------------------------------------------------------1.00------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCATT.................................................235.000.00--1.00--------------------1.00---1.00-----1.00--------------------1.00--------------------------------------------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAGA................................................................................................2215.005.00--1.00-1.00------1.00--------------------------------------------------------------1.00---------1.00--------------------------
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGAGCT.............................................................................................2415.0030.00--------1.00------------------------------------------1.00---------1.00----------1.00--1.00-----------------------------------
..................................................................................................................................CCCTGGAAAGGAAGAAACAGCAGA................................................................................................2414.004.00-----1.00---------------1.00--------------------------1.00---------------1.00----------------------------------------------
..............................................................................................................................................................CTGGGGTCCCTACATGAAA.........................................................................194.000.00------------------4.00--------------------------------------------------------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAGA................................................................................................2314.004.00-------------------1.00------------------2.00----------------------------------------------------------------1.00-------
......................GTGGAGCCTGGCGCTATAC.................................................................................................................................................................................................................193.000.00-3.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGTA................................................2413.0017.00----1.00------1.00----------------------------------------------------------------------------------------1.00----------
......................GTGGAGCCTGGCGCTTGAGA................................................................................................................................................................................................................2013.003.00------------------------3.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGTC................................................2413.0017.00--1.00-1.00--1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGC.................................................2313.0017.00-------2.00----------------------------------------------------------------------------------------1.00--------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAG.................................................................................................2213.003.00--------------------1.00---------------1.00----------------------1.00---------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCC....................................................2012.002.00-------------------------------------------------------------------------------1.00--------1.00----------------------
......................GTGGAGCCTGGCGCTAGGC.................................................................................................................................................................................................................192.000.00-2.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAAT.................................................232.000.00----------1.00-------------------------------------------------------------------------------1.00--------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAG.................................................................................................2112.002.00-----------------------------------------------2.00---------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCATTT................................................242.000.00-----------------------------1.00------------------------------------------------1.00--------------------------------
....................................................................................................................................................................................GGGTTTCTCTCCTCTTCCAGTTT...............................................232.000.00-------------------------------------------2.00-------------------------------------------------------------------
......................GTGGAGCCTGGCGCTA....................................................................................................................................................................................................................162.000.00----------------------------2.00----------------------------------------------------------------------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAGAGA..............................................................................................2412.006.00--------------------------2.00------------------------------------------------------------------------------------
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGAGCA.............................................................................................2412.002.00----------1.00--------------------------------------------------------------------------------1.00-------------------
......................GTGGAGCCTGGCGCTAACC.................................................................................................................................................................................................................192.000.00-2.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGC...................................................................................................2012.002.00---------------------------------------------------------------------------------------------------1.00--1.00--------
.................................................................................................................................................................................................................ACCTGGATGACCTGCTGCCCAAGCTCTGGG...........3012.002.00----------------------------------------------------2.00----------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGTTT...............................................2512.0017.00---------------------------------------------------1.00-----------------1.00-----------------------------------------
..................................................................................................................................CCCTGGAAAGGAAGAAACAGCAG.................................................................................................2312.002.00-----------------1.00----------------------------------------------------------------1.00----------------------------
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGAGA..............................................................................................2312.007.00--1.00------------1.00-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................CGGGTTTCTCTCCTCTTCCAGTTT...............................................241.000.00------------------------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTC........................................................1611.001.00-----------------------------------------------------------------------------------------------------------1.00---
......................GTGGAGCCTGGCGCTTA...................................................................................................................................................................................................................171.000.00----------------------------------------------------------1.00----------------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAA.................................................................................................2211.001.00-----------------------------------1.00---------------------------------------------------------------------------
......................GTGGAGCCTGGCGCTTGAGAGCATCTGTC.......................................................................................................................................................................................................2911.001.00--------------------------------------------------------------------------------------------------------1.00------
.............................................................................................................................................................................................................ACGTACCTGGATGACCTGCTGCCCAAGC.................2811.001.00------------------------------------------------------------------------------------------------------------1.00--
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGAGT..............................................................................................2311.007.00-----1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGCAGAGCAGCTGGGGTGC...................................................................................191.000.00---------------------------------1.00-----------------------------------------------------------------------------
................................................................................................................................................................................................................TACCTGGATGACCTGCTGCCC.....................2111.001.00----------------------------------------------------------------------------------------------------------1.00----
............................................................................................................................................................AGCTGGGGTCCCTACATGAAGC........................................................................2211.001.00-------------------------------------------------------------------1.00-------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAGAGCAGCTGG........................................................................................3111.001.00--------------------------------------------------------1.00------------------------------------------------------
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGAGCTT............................................................................................2511.0030.00--------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TCCCTACATGAAGCTCGG....................................................................1811.001.00-------------------------------------------------------------------------------------1.00-------------------------
............................................................................................................................................................................................................TACGTACCTGGATGACCTGCTGCCC.....................2511.001.00-------------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAGAG...............................................................................................2411.001.00------------------------------------------1.00--------------------------------------------------------------------
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGA................................................................................................2111.001.00---1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGAAC...............................................2511.0017.00----------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................GTTTAAGTGGTGTGCTCGGG........................................................................................................................201.000.00------------------------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGTTC...............................................2511.0017.00----------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTCGGGTTTCTCTCCTCTTCT....................................................211.000.00-----------------------------------------1.00---------------------------------------------------------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAGAGCT.............................................................................................2511.0010.00---1.00-----------------------------------------------------------------------------------------------------------
......................GTGGAGCCTGGCGCTAGA..................................................................................................................................................................................................................181.000.00-------------------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................CCCCTGGAAAGGAAGAAACAGCA..................................................................................................2311.001.00------------------------------1.00--------------------------------------------------------------------------------
..............................................................................................................................................AGAAACAGCAGAGCACGG..........................................................................................181.000.00---------------------------------------------------------------------------------------1.00-----------------------
...................................................................................................................................CCTGGAAAGGAAGAAACA.....................................................................................................1811.001.00-----------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................................ACGTACCTGGATGACCTGCT.........................2011.001.00-----1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCCG..................................................2211.002.001.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAGAGA..............................................................................................2511.001.00------1.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CTTACGTACCTGGATGACCTGC..........................2211.001.00---------------------------------------1.00-----------------------------------------------------------------------
...................................................................TGCTGTTGTGGCTCTCCGTGCTCA...............................................................................................................................................................2411.001.00---------------------------------------1.00-----------------------------------------------------------------------
.................................................................................................................................CCCCTGGAAAGGAAGAAACAGCAG.................................................................................................2411.001.00---1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GTCTTACGTACCTGGATGAC..............................2011.001.00---------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAT..................................................221.000.00----------------------------------------------------------------------------------------------1.00----------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAGAGCT.............................................................................................2611.001.00---------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCA..................................................................................................2111.001.00--------------------1.00------------------------------------------------------------------------------------------
......................GTGGAGCCTGGCGCTTTCC.................................................................................................................................................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCGGGTTTCTCTCCTCTTCCAGAT................................................2411.0017.00---------------------------------------------------------1.00-----------------------------------------------------
......................GTGGAGCCTGGCGCTAA...................................................................................................................................................................................................................171.000.00--------------------------------------------1.00------------------------------------------------------------------
.......................................................................................................................................................................................TTTCTCTCCTCTTCCAGT.................................................181.000.00-----------------------------------------------------1.00---------------------------------------------------------
...................................................................................................................................CCTGGAAAGGAAGAAACAGCAGAGC..............................................................................................2511.001.00-----1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GACCTGCTGCCCAAGCTCTGGGCGT........2511.001.00-----1.00---------------------------------------------------------------------------------------------------------
...................................................................TGCTGTTGTGGCTCTAG......................................................................................................................................................................171.000.00-1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAGAGT..............................................................................................2411.006.00----------------------------------1.00----------------------------------------------------------------------------
................................................................................................................................................................................................................TACCTGGATGACCTGCTGCCCAAGCT................2611.001.00---------------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................TGGAAAGGAAGAAACAGCAGACA..............................................................................................2311.001.00----------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................CAAGCTCTGGGCGTTTAT....1811.001.00----------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCAGAA...............................................................................................2311.005.00-----------------------------------------------------------------------1.00---------------------------------------
....................................................................................................................................CTGGAAAGGAAGAAACAGCA..................................................................................................2011.001.00--------------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................CGGGTTTCTCTCCTCCAGT....................................................191.000.00---1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTCGGGTTTCTCTCCTCTTCCAGT.................................................241.000.00--------------------------------------------------1.00------------------------------------------------------------
....................GAGTGGAGCCTGGCGCTTGTAAA...............................................................................................................................................................................................................231.000.00-----------------------------1.00---------------------------------------------------------------------------------
......................GTGGAGCCTGGCGC......................................................................................................................................................................................................................1460.330.33-------------------------------------------------------------------------------------------------------------0.33-
...................................................................................................................................................................................................................CTGGATGACCTGCTGC.......................1640.250.25--------0.25------------------------------------------------------------------------------------------------------

Antisense strand
AGCTGCTCCCGAGACTGGCAGAGTGGAGCCTGGCGCTTGAGAGCATCTGTCCAGTGTCAGCTGCCCCTGCTGTTGTGGCTCTCCGTGCTCACACCTTCTCTCGCGGGCTGGTTTAAGTGGTGTGCTTTTCCCCTGGAAAGGAAGAAACAGCAGAGCAGCTGGGGTCCCTACATGAAGCTCGGGTTTCTCTCCTCTTCCAGGTCTTACGTACCTGGATGACCTGCTGCCCAAGCTCTGGGCGTTTATCTGT
....................................................................................................................................((((((((((((((((....((((....((....))........))))..)))))).)))).))))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR206940(GSM723281)
other. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR073954(GSM629280)
total RNA. (blood)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR553582(SRX182788)
source: Brain. (Brain)		mjTestesWT3()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR206942(GSM723283)
other. (brain)		SRR206941(GSM723282)
other. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		mjTestesWT4()
Testes Data. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR037937(GSM510475)
293cand2. (cell line)		SRR206939(GSM723280)
other. (brain)		mjTestesWT1()
Testes Data. (testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR073955(GSM629281)
total RNA. (blood)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
.................................................................................................................................................................GGGTCCCTACATGAAAAA....................................................................... 183.000.00----------1.00----------------------------------2.00-----------------------------------------------------------------
.................................................................................................................................................................GGGTCCCTACATGAAAAC....................................................................... 182.000.00----------2.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................AAGAAACAGCAGAGCAG............................................................................................ 1790.110.11-----------------------------0.11---------------------------------------------------------------------------------
.................................................................................................................................................................................................................ACCTGGATGACCTGC.......................... 15100.100.10--------------------------------------------------------------------------------------------------------------0.10