ID: mmu-mir-7016
GENE: Tmem39b(2)
chr4:129361694-129361943-


(3)
AGO1.ip 		(13)
AGO2.ip 		(2)
AGO3.ip 		(10)
B-CELL 		(28)
BRAIN 		(4)
CELL-LINE 		(1)
DCR.mut 		(2)
DGCR8.mut 		(5)
EMBRYO 		(6)
ESC 		(1)
FIBROBLAST 		(2)
KIDNEY 		(2)
LIVER 		(4)
LYMPH 		(15)
OTHER 		(4)
OTHER.mut 		(1)
PIWI.ip 		(6)
SKIN 		(5)
SPLEEN 		(12)
TESTES 		(1)
THYMUS 		(3)
TOTAL-RNA 		(2)
UTERUS

Sense strand
ACAGTAGAGCAGTTTTGACCTTAGGAAATCAGCTGGTGGGCACAGGGTCCAAGCTGCCCTTTTGCAGTGAGTCATTGTTGGTTTCGGGTGGTCTTGAAGTCTTCACAGTGCTATTCTAGCTTCTAGGTCGACTCAGGGAGGGGAGCGAGAGTAGGCCACTATGGACATGCTGAGCCTGACCTGCCTCCTGCTCTCCCCAGAATACACATTACTATGACAAGCGCTGGTCCTGTGAGCTCTTCCTGCTGGT
.......................................................................................................................................(((((((.((.(((.(((((((.....)).((.((...)).)).)))))))))).))))))).....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR206940(GSM723281)
other. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		mjTestesWT3()
Testes Data. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR206939(GSM723280)
other. (brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR206942(GSM723283)
other. (brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR206941(GSM723282)
other. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjTestesWT1()
Testes Data. (testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR060845(GSM561991)
total RNA. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR073954(GSM629280)
total RNA. (blood)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGT.................................................23140.0010.0010.00--1.001.00-3.00-2.00-2.001.00---1.001.002.00---2.00-1.00--1.00---1.00-1.002.00----2.00-------------------------1.00-----1.001.00-------1.00----1.00--------------1.00------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAG................................................................................................21120.0020.001.001.006.001.001.00-----1.00-1.00-----1.00------1.00---1.00---------------------------------1.00----------1.00------1.00-------------------1.00-1.00--
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGA.................................................23116.0016.002.00--1.001.002.00--2.00------1.00-----------1.00---1.001.00----1.00------1.00------------1.00---1.00--------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTA.................................................................................................20112.0012.00-4.00----1.003.00------3.00-----------------------------------------------1.00-------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGG...............................................................................................22111.0011.002.00-2.00-1.00------1.001.00-----------------1.00------1.00---------------------------------------------------1.00--1.00-------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAG..................................................22110.0010.002.00--2.00------1.00--2.00---1.00-1.00----------1.00---------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGC..............................................................................................2317.007.001.00----1.00---4.00--------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGA...............................................................................................2216.0020.00------------2.00------------2.00---1.00-----------------------------------------------------1.00----------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAG................................................................................................2214.004.00----2.00-------------1.00--------------------------------------------------------1.00------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAT..................................................2214.002.00-------1.00---2.00------------------------1.00---------------------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCACT..........................................................................................2214.004.00-------------------------------------------------1.00---1.00-----------1.00--------------1.00-------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTA.................................................................................................2114.004.00--------------1.00-------------2.00-------1.00---------------------------------------------------------------------
......................................................................................................................................AGGGAGGGGAGCGAGAGTAGGC..............................................................................................2214.004.001.00----1.00----1.00----------------------1.00------------------------------------------------------------------------
................................................................................................................................................................................TGACCTGCCTCCTGCTCTCCCCAGT.................................................254.000.003.00-----------------------------------------------1.00---------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGG...............................................................................................2313.003.00-------------------1.00------1.00--------------------------1.00----------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCACAT.........................................................................................2313.003.00--------3.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCAC...........................................................................................2113.003.001.00-----------------------------------------------------------------1.00---------------------------1.00-----------
......................................................................................................................................AGGGAGGGGAGCGAGAGTAG................................................................................................2013.003.00-----------------------1.00---------------------1.00-----1.00------------------------------------------------------
......................................................................................................................................................................................................................TGACAAGCGCTGGTCCTGTGAGCT............2413.003.00----------------------------------1.00--------2.00--------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAA..................................................2212.002.00------------------------2.00---------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGT...............................................................................................2212.0020.00---1.00------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................GCTCTCCCCAGAATACCT...........................................182.000.00-----------------------------------------------2.00----------------------------------------------------------
........................................................................................................................................GGAGGGGAGCGAGAGTAGG...............................................................................................1912.002.00-----2.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ATGACAAGCGCTGGTCCTGT.................2012.002.00-----------------------------------------2.00----------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGATT...............................................2512.0016.00-------------2.00--------------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGCC.............................................................................................2412.002.00----------------------------------------------------1.00----------------------------------------1.00------------
......................................................................................................................................AGGGAGGGGAGCGAGAGTAGGCCAT...........................................................................................252.000.00---------------------------------------1.00--1.00---------------------------------------------------------------
.........................................................................................................................................GAGGGGAGCGAGAGTAGGCCA............................................................................................2112.002.00-1.00-------------------------------------------1.00------------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCAT...........................................................................................212.000.00-------------------------------------------------------------------------------------1.00----------1.00---------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCACTA.........................................................................................2312.002.00-------1.00-----------------------1.00--------------------------------------------------------------------------
.........................................................................................................................................GAGGGGAGCGAGAGTAGGCCATTT.........................................................................................2412.002.00-1.00------------------------------------------------1.00-------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGT...............................................................................................2312.004.00--2.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGT..................................................................................................1912.002.00-1.00--------------------------1.00-----------------------------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGGT..............................................................................................2412.003.00-----2.00----------------------------------------------------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGGC..............................................................................................2412.002.001.00-------------------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCA...................................................2112.002.00-----------------1.00------1.00---------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGCCA............................................................................................2512.002.00-----------1.00----1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAT................................................................................................2112.0012.00----------------1.00----------------------------------------------------1.00------------------------------------
......................................................................................................................................AGGGAGGGGAGCGAGAGTA.................................................................................................1912.002.00-1.00-------------------------------------1.00------------------------------------------------------------------
.................ACCTTAGGAAATCAGCTGG......................................................................................................................................................................................................................1911.001.00----------------------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................................................................CAAGCGCTGGTCCTGTGAG..............1911.001.00-----------------------------------------------------------------------------------------------1.00----------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGAAT.............................................................................................2511.004.00--1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCAAAGT........................................................................................241.000.00----------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGTTT............................................................................................2511.0011.00----------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGCCAAT..........................................................................................2711.002.00--------------------------------------------------1.00-------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCACA..........................................................................................2211.003.00------------------------------------------------------------------------------1.00---------------------------
................................................................................................................................................................................TGACCTGCCTCCTGCTCTCCCCAGTT................................................261.000.00-------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGAAA............................................................................................2511.0011.00-1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGGCCA............................................................................................2611.001.00-----------------------1.00----------------------------------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTATAA..............................................................................................2411.004.00-------------------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGTAT...............................................2511.0010.00----1.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCAAA..........................................................................................221.000.00--------------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCAAGA.........................................................................................231.000.00--------------------------------------------------------------------------------------------------------1.00-
.......................................................................................................................................GGGAGGGGAGCGAGAGTAGGTAGA...........................................................................................241.000.00-------------------------------------------------------------------------------------------1.00--------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCAAAA.........................................................................................231.000.00------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCC....................................................2011.001.00------------------------------------------------1.00---------------------------------------------------------
.........................................................................................................................................GAGGGGAGCGAGAGTAGGCCAT...........................................................................................2211.002.00-------------------------------------------------1.00--------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGGTCAT...........................................................................................2711.003.00------------------------------------------------------------------------------------------1.00---------------
.......................................................................................................................................GGGAGGGGAGCGAGAGTAGGCC.............................................................................................2211.001.00----------------------------------------------------1.00-----------------------------------------------------
...........................................................................................................................................................................................................ACACATTACTATGACAAGC............................1911.001.00---------------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................GGGAGGGGAGCGAGAGTAGGCCA............................................................................................2311.001.00---1.00------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGTTAA..............................................2611.0010.001.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGGAGCGAGAGTAGGCCATT..........................................................................................261.000.00---------------------------------------------------1.00------------------------------------------------------
...........................................................................................................................................................................................................ACACATTACTATGACAAGCG...........................2011.001.00---------------1.00------------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGA..............................................................................................2311.0011.00---------1.00------------------------------------------------------------------------------------------------
..............................................................................................................................................................CTATGGACATGCTGAGCCTGA.......................................................................2111.001.00-------------------------------------------------------------------------------------------------1.00--------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCACTAT........................................................................................2411.001.00----------------------------------------------------------------------------------------------------1.00-----
...................................................................................................................................................................................................................CTATGACAAGCGCTGGTCCTGTGAGC.............2611.001.00------------------------------------------------------------------------1.00---------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGG.................................................2311.0010.00-------------1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................GGGGAGCGAGAGTAGGCCACTT.........................................................................................221.000.00------1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................GGAGGGGAGCGAGAGTAGGCCATA..........................................................................................241.000.00-1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGGAGCGAGAGTAGGCCAA...........................................................................................251.000.00------1.00---------------------------------------------------------------------------------------------------
.....................................................................................................................AGCTTCTAGGTCGACTCC...................................................................................................................181.000.00--------------------------------------------------------------------------------------1.00-------------------
......................................................................................................................................................................................................................TGACAAGCGCTGGTCCTGTGAGCTC...........2511.001.00------------------------------------------------------------1.00---------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGGAT.............................................................................................2511.003.00----1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGGAGCGAGAGTAGG...............................................................................................2111.001.00-----------------------------------------------------------------------------1.00----------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGATA...............................................2511.0016.001.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................CTATGGACATGCTGAGCCTG........................................................................2011.001.00-----------------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................GGGAGGGGAGCGAGAGTAG................................................................................................1911.001.00------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGAA................................................2411.001.00----------------------------------------------------------------------------------------1.00-----------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGTAAT..............................................2611.0010.00------------------------------------------------------------------------------------------------------1.00---
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGCA.............................................................................................2411.007.00--------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAG...................................................................................................1811.001.00----------------------------------------------------------1.00-----------------------------------------------
...................................................................................................TCTTCACAGTGCTATGAAG....................................................................................................................................191.000.00--------------------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................................CTGCCTCCTGCTCTCCCCAT..................................................201.000.00--------------------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................................CTATGGACATGCTGAGCCT.........................................................................1911.001.00--------------------------------------------------------------------1.00-------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGTAA...............................................2511.0010.001.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TGACCTGCCTCCTGCTCTCC......................................................2011.001.00---------------------1.00------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAA................................................................................................2111.0012.00-1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................CCTGTGAGCTCTTCCTGCTGGT2211.001.00------------------------------------------------------1.00---------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGAA.................................................................................................2011.001.00--------------------1.00-------------------------------------------------------------------------------------
......................................................................................................................................AGGGAGGGGAGCGAGAGTAGGCAA............................................................................................2411.004.00---1.00------------------------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGGCCAT...........................................................................................2611.002.00------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................GGAGGGGAGCGAGAGTAGGCCAATT.........................................................................................251.000.00----------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGTTA...............................................2511.0010.00---------------------------------------------------------------------------------------1.00------------------
..................................................................................................................................ACTCAGGGAGGGGAGCGAGAGTAGGCCA............................................................................................2811.001.00-------------------------------------------------------------------1.00--------------------------------------
.........................................................................................................................................GAGGGGAGCGAGAGTAGGCCAGA..........................................................................................2311.002.00-1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAAG...............................................................................................2211.0012.00-------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGTAGTTTT............................................................................................2511.0020.00-1.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGGGAGCGAGAGTAGGCCATT..........................................................................................221.000.00-------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAAGT.................................................................................................211.000.00----------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGAAA...............................................2511.001.00-------------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................CAGGGAGGGGAGCGAGAGCA.................................................................................................2011.001.00----------------------------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGTTT...............................................2511.0010.001.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................TCAGGGAGGGGAGCGAGAGTAGGA..............................................................................................2411.003.00-----------------------------------1.00----------------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGAAT...............................................2511.001.00----------------------------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................ACCTGCCTCCTGCTCTCCCCAGAT................................................2411.0016.00-----------------------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................................................................GTCCTGTGAGCTCTTGC.......171.000.00--------------------------------------------1.00-------------------------------------------------------------
............................................................................GTTGGTTTCGGGTGGT..............................................................................................................................................................1620.500.50------------------------------------------------------0.50---------------------------------------------------

Antisense strand
ACAGTAGAGCAGTTTTGACCTTAGGAAATCAGCTGGTGGGCACAGGGTCCAAGCTGCCCTTTTGCAGTGAGTCATTGTTGGTTTCGGGTGGTCTTGAAGTCTTCACAGTGCTATTCTAGCTTCTAGGTCGACTCAGGGAGGGGAGCGAGAGTAGGCCACTATGGACATGCTGAGCCTGACCTGCCTCCTGCTCTCCCCAGAATACACATTACTATGACAAGCGCTGGTCCTGTGAGCTCTTCCTGCTGGT
.......................................................................................................................................(((((((.((.(((.(((((((.....)).((.((...)).)).)))))))))).))))))).....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR206940(GSM723281)
other. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		mjTestesWT3()
Testes Data. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR206939(GSM723280)
other. (brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR206942(GSM723283)
other. (brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR206941(GSM723282)
other. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjTestesWT1()
Testes Data. (testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR060845(GSM561991)
total RNA. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR073954(GSM629280)
total RNA. (blood)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
.................................................................................................................TTCTAGCTTCTAGGTGCTG...................................................................................................................... 191.000.00------------------------------------------1.00---------------------------------------------------------------
.........................................................................................................................................GAGGGGAGCGAGAGTA................................................................................................. 1611.001.00----------------------------------------------------------------------------------1.00-----------------------
.....................................................................................................TTCACAGTGCTATTCTTTT.................................................................................................................................. 191.000.00---------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................................GCTCTCCCCAGAATACACATTACTA.................................... 2511.001.00----------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................CAGAATACACATTACCG.................................... 171.000.00-----------------------------1.00----------------------------------------------------------------------------
.................................................................................................................TTCTAGCTTCTAGGTCGAC...................................................................................................................... 1911.001.00----------------------------------------------1.00-----------------------------------------------------------
.......................................................................................GTGGTCTTGAAGTCTATG................................................................................................................................................. 181.000.00-------------------------------------------------------1.00--------------------------------------------------
...............TGACCTTAGGAAATCAGAAC....................................................................................................................................................................................................................... 201.000.00--------------------------------------------------------------------------------------------------1.00-------
........................................................................................TGGTCTTGAAGTCTTCATT............................................................................................................................................... 191.000.00---------------------------1.00------------------------------------------------------------------------------
......................................................................................................................................................................................GCCTCCTGCTCTCCCCA................................................... 1740.500.50-------------------------------------------------------0.25-------------------------------------------------0.25