ID: mmu-mir-7012
GENE: Dennd4b(7)
chr3:90073994-90074184+


(1)
AGO.mut 		(3)
AGO1.ip 		(6)
AGO2.ip 		(1)
AGO3.ip 		(14)
B-CELL 		(15)
BRAIN 		(2)
CELL-LINE 		(1)
DCR.mut 		(7)
EMBRYO 		(5)
ESC 		(1)
FIBROBLAST 		(2)
HEART 		(4)
LIVER 		(5)
LYMPH 		(26)
OTHER 		(1)
OTHER.mut 		(1)
OVARY 		(1)
PANCREAS 		(1)
PIWI.mut 		(2)
SKIN 		(9)
SPLEEN 		(4)
TESTES 		(3)
THYMUS 		(1)
UTERUS

Sense strand
TTCACAACGTCCCATTCCCATCCCCACAGAGACCACGCATCCTAGTGCAGGTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGATGTCTCCCTATGACAACCTGCTCCTCTGTCAACCTGTCTCCTCACCCCT
....................................................................................((((((((((((((((((....((.....)).))))).))...))))))))))).....................................................
.............................................................................78.............................................................141................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206939(GSM723280)
other. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR525237(SRA056111/SRX170313)
Mus musculus domesticus miRNA sequencing. (Blood)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR206942(GSM723283)
other. (brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
..................................................................................AAGGAGAGGAGTTGGCAGGGACT......................................................................................23167.0067.00---10.001.001.007.001.00--4.006.003.005.00--4.002.00---1.00--1.00-2.00---2.001.001.00--2.00--1.00-----1.002.00---1.00--1.00----1.00-----1.00-----1.00-----1.00-------1.00-----1.00----1.00-------
..................................................................................AAGGAGAGGAGTTGGCAGG..........................................................................................19161.0061.00-9.006.00-8.006.00-3.004.005.00----4.00--2.001.00---3.002.00-2.00-----------1.00----1.00-----------------1.00------1.00-----1.00---------------------------1.00
..................................................................................AAGGAGAGGAGTTGGCAGGG.........................................................................................20118.0018.00-5.003.00--3.00-4.001.00--------1.00-------1.00----------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAG...........................................................................................18115.0015.00-4.004.00-1.00--2.00--------------1.00----------------1.00--1.00---------------------------------------------------------1.00-
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAG..................................................91114.0014.0014.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGT.................................................92113.0014.0013.00-----------------------------------------------------------------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAGG..........................................................................................20111.0011.00-1.003.00-1.002.00--2.00---------1.00------------------------------------------1.00----------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGA........................................................................................2116.006.00----1.00----1.00--------1.00----------1.00-------------------------1.00---------------------------------------1.00------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAT..................................................2215.003.00-----------------------------------------------1.00------------------1.00----------1.00--------1.00-1.00-------------
......................................................................................................................CTGACCTGTGGCTCCTCTCCCAGT.................................................245.000.00---------------5.00--------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATT......................................................................................2314.006.00------------1.00-----------------------------------------------------------------------------1.00-------1.001.00--
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGTTT...............................................9414.0014.004.00-----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGAC.......................................................................................2214.004.00---1.00--2.00----1.00------------------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGACT......................................................................................2214.004.00------1.00-------------------------1.00-------------2.00-------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCC....................................................8914.004.004.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAG..................................................2214.004.00---------------------------1.00---------------2.00--------------------------------1.00-------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCATT.................................................2313.003.00---------------------------1.001.00--------------------------------------------------------1.00----------------
.................................................................................GAAGGAGAGGAGTTGGCAGGG.........................................................................................2113.003.00----1.00---1.00--------------1.00------------------------------------------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAGGGACT......................................................................................2413.003.00---1.00--------1.00-------------1.00---------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGAA................................................933.000.003.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCA...................................................2113.003.00----------------------------1.001.00---------------------------------------------------1.00--------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAGT.................................................2313.004.00---------------------------1.00----------------------------------1.00-----1.00---------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAG...........................................................................................1912.002.00--1.00--------------------------------------1.00------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGAAA......................................................................................222.000.00----------------------------------------2.00-------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATTAA....................................................................................2512.006.00---------2.00--------------------------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCCG..................................................9112.004.002.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCCG..................................................2212.001.00------------------------------------------------------------------------1.00-1.00---------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGAC.......................................................................................2112.002.00----------------1.00-------1.00-----------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTAA....................................................................................2512.001.00-------1.00-----1.00----------------------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGAT................................................9312.002.002.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGTTTT..............................................9512.0014.002.00-----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATTT.....................................................................................2412.006.00---1.00----------------------1.00---------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTTAT...................................................................................2612.0067.00--1.00--1.00------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTT.....................................................................................2412.0067.00---1.00--------------------1.00-----------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACAA.....................................................................................2412.004.00----1.00----------------1.00--------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATAT.....................................................................................2412.006.00------1.00---1.00-------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAAT.................................................2312.003.00--1.00---------------------------------------------------------------------------------------------1.00-----
..................................................................................AAGGAGAGGAGTTGGCAGGGATAAA....................................................................................2512.006.00-1.00-------------------1.00--------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAGA.................................................2312.002.00------------------------------------1.00---------------------------1.00-------------------------------------
...........................................................................TGGACGGAAGGAGAGTACC.................................................................................................192.000.00--------------------------------------1.00---------------------------------------1.00-----------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGTT................................................9312.0014.002.00-----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATTTT....................................................................................2512.006.00---1.00--1.00-----------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGTACT......................................................................................2311.0061.00----1.00-------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGAACT......................................................................................2311.0061.00-----------1.00------------------------------------------------------------------------------------------
................................................................................................................AGCATCCTGACCTGTGGCTCCT.........................................................2211.001.00----------1.00-------------------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGACAA.....................................................................................2311.002.00--------------1.00---------------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGACTAAT...................................................................................251.000.00-1.00----------------------------------------------------------------------------------------------------
..........................................................................CTGGACGGAAGGAGAGGA...................................................................................................1811.001.00-------------------1.00----------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATAAT....................................................................................2511.006.00---1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCAA...................................................211.000.00--------------------------------------------------------------------------------------------1.00---------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTATT...................................................................................2611.001.00-1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCCGT.................................................2311.001.00----------------------------------------------------------------------------------1.00-------------------
...........................................................................TGGACGGAAGGAGAGTA...................................................................................................171.000.00------------------------------------------------------1.00-----------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGTA.........................................................................................2011.0015.00------------------1.00-----------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGACTAATT..................................................................................261.000.00-1.00----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGAAA......................................................................................2311.006.00----------1.00-------------------------------------------------------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAGGGA........................................................................................2211.001.00-------------------------------------------------------------------------------1.00----------------------
.........................................................GTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCT.........................................................7711.001.001.00-----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGT.........................................................................................2011.0061.00-------1.00----------------------------------------------------------------------------------------------
......................................................................TGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGA........................................................................................3311.001.00-------------------------------------------------------------------------------------------------1.00----
...................................................................................AGGAGAGGAGTTGGCAGGGTAA......................................................................................2211.001.00----------------------------------------------------------------------1.00-------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGAAT......................................................................................2311.006.00-------------------------------------1.00----------------------------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAGGGAT.......................................................................................2311.001.00---------------------1.00--------------------------------------------------------------------------------
......................................................................................AGAGGAGTTGGCAGGGACTAGCT..................................................................................2311.001.00------1.00-----------------------------------------------------------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAGGGATTA.....................................................................................2511.001.00-----------------------------1.00------------------------------------------------------------------------
.....................................................................CTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACT......................................................................................3611.001.00-----------------------------------------------------------------1.00------------------------------------
...............................................................................CGGAAGGAGAGGAGTTGGCAGG..........................................................................................2211.001.00-1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAGGAAT..............................................2611.004.00---------1.00--------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGCCT......................................................................................2311.0018.00---1.00--------------------------------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGAATT..............................................951.000.001.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAAA.................................................2311.003.00----------------------------1.00-------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGAAA.......................................................................................2211.0061.00----------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAGAA................................................2411.002.00-1.00----------------------------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGACAGAG...................................................................................2511.002.00----1.00-------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCC....................................................2011.001.00----------------------------1.00-------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAAGA..........................................................................................................................191.000.00----------------------------------1.00-------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTG.......................................................................................................................2211.001.00---------------------------------------------------------------------------------------------1.00--------
.........................................................GTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAG..................................................8411.001.001.00-----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGAAT.......................................................................................2211.0061.00-----------------------------------------------------------------------1.00------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCACT.................................................921.000.001.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGGTT...............................................9411.0014.001.00-----------------------------------------------------------------------------------------------------
.........................................................GTGAGCCTAGGGCTGGGCTGGACGG.............................................................................................................2511.001.00--------------------------------------------1.00---------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAT..................................................911.000.001.00-----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTAATTT.................................................................................2811.001.00------1.00-----------------------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGACTAGT...................................................................................2511.001.00---------------------------------------------------------------------------------------1.00--------------
...................................................................................AGGAGAGGAGTTGGCAGGTTTA......................................................................................2211.001.00--------1.00---------------------------------------------------------------------------------------------
.................................................................AGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCCGTT................................................781.000.001.00-----------------------------------------------------------------------------------------------------
...............................................................................CGGAAGGAGAGGAGTTGGCAGGGACTA.....................................................................................2711.001.00--------------------------------------------------1.00---------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCTTCT.........................................................................................191.000.00-------------------1.00----------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACA......................................................................................2311.004.00---------------------------1.00--------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGG.................................................9211.0014.001.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCT...................................................................................................................2611.001.00------------------------------------1.00-----------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGTATT..............................................9511.0014.001.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAA..................................................2211.003.00----------------------------------1.00-------------------------------------------------------------------
......................................................................TGGGCTGGACGGAAGTACT......................................................................................................191.000.00-------------------1.00----------------------------------------------------------------------------------
......ACGTCCCATTCCCATCCCC......................................................................................................................................................................1911.001.00------------------------1.00-----------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATAAC....................................................................................2511.006.00-----1.00------------------------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGGACTAG....................................................................................2411.001.00---1.00--------------------------------------------------------------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAGGGT........................................................................................2211.003.00-------------------------------1.00----------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGG..........................................................................................1811.001.00--------1.00---------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCATGG.........................................................................................201.000.00---------1.00--------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGATAA.....................................................................................2411.006.00------------------------------------------------------------------------------------1.00-----------------
.........................................................GTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCT............................................................7411.001.001.00-----------------------------------------------------------------------------------------------------
.........................................................GTGAGCCTAGGGCTGGGCTGGACGGA............................................................................................................2611.001.00-----------------------1.00------------------------------------------------------------------------------
...................................................................................AGGAGAGGAGTTGGCAGGG.........................................................................................1911.001.00-------------------------1.00----------------------------------------------------------------------------
..................................................GTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGGT................................................9311.0014.001.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................TGACCTGTGGCTCCTCTCCCAGTAA...............................................2511.004.00-----------------------------------------------1.00------------------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCA............................................................................................1821.001.00---------------------0.500.50-------------------------------------------------------------------------------
.....................................................................................GAGAGGAGTTGGCAGGGACT......................................................................................2011.001.00----------1.00-------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGTTTA.......................................................................................2211.0015.00---------------------------------------1.00--------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGAAAA.....................................................................................2411.006.00-1.00----------------------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTAT....................................................................................2511.001.00------------------1.00-----------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGAA.......................................................................................2211.006.00----------------------------------------------------------1.00-------------------------------------------
.................................................................................GAAGGAGAGGAGTTGGCAGGGAC.......................................................................................2311.001.00-----------------------------------------1.00------------------------------------------------------------
........................................................GGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGG....................................................................................................3511.001.00--------------------------------------------------------------------------------1.00---------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTA.....................................................................................2411.001.00------------1.00-----------------------------------------------------------------------------------------
..................................................................................AAGGAGAGGAGTTGGCAGGGACTAGT...................................................................................261.000.00--------1.00---------------------------------------------------------------------------------------------
....................................................................GCTGGGCTGGACGGA............................................................................................................1550.200.20------------------------------------------------0.20-----------------------------------------------------

Antisense strand
TTCACAACGTCCCATTCCCATCCCCACAGAGACCACGCATCCTAGTGCAGGTGAGAGGTGAGCCTAGGGCTGGGCTGGACGGAAGGAGAGGAGTTGGCAGGGACTAGCTATGAGCATCCTGACCTGTGGCTCCTCTCCCAGATGTCTCCCTATGACAACCTGCTCCTCTGTCAACCTGTCTCCTCACCCCT
....................................................................................((((((((((((((((((....((.....)).))))).))...))))))))))).....................................................
.............................................................................78.............................................................141................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206939(GSM723280)
other. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR525237(SRA056111/SRX170313)
Mus musculus domesticus miRNA sequencing. (Blood)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR206942(GSM723283)
other. (brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
.......................CCACAGAGACCACGCAT....................................................................................................................................................... 175.000.00--------------------5.00---------------------------------------------------------------------------------
...............................................................................................................................................................................CTGTCTCCTCACCCCTCAG 191.000.00-------------------1.00----------------------------------------------------------------------------------
.......CGTCCCATTCCCATCATT...................................................................................................................................................................... 181.000.00---------------------------------------------------1.00--------------------------------------------------
............................................................................GGACGGAAGGAGAGGGCC................................................................................................. 181.000.00---------------------------------1.00--------------------------------------------------------------------
...........CCATTCCCATCCCCACATG................................................................................................................................................................. 191.000.00------------------------------------------------1.00-----------------------------------------------------
...........................................................................................................................................................................CAACCTGTCTCCTCATATG. 191.000.00-----------------------------------------------------1.00------------------------------------------------
.........................................................GTGAGCCTAGGGCTGGGATGA................................................................................................................. 211.000.00-----------------------------------------------------------1.00------------------------------------------
............................................................................GGACGGAAGGAGAGGGC.................................................................................................. 171.000.00---------------------------------1.00--------------------------------------------------------------------
..........................................................................................................................................................................TCAACCTGTCTCCTCAATT.. 191.000.00-------------------------------------------------------------------------------------------1.00----------
.....................................................AGAGGTGAGCCTAGGGCTGT...................................................................................................................... 201.000.00-------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................GACAACCTGCTCCTCTGGAG.................. 201.000.00--------------------------------------------------------1.00---------------------------------------------