ID: mmu-mir-6979
GENE: Diap1(4)
chr18:38014209-38014458-


(1)
AGO.mut 		(2)
AGO1.ip 		(10)
AGO2.ip 		(1)
AGO3.ip 		(9)
B-CELL 		(27)
BRAIN 		(5)
CELL-LINE 		(2)
DCR.mut 		(8)
EMBRYO 		(11)
ESC 		(5)
FIBROBLAST 		(1)
HEART 		(2)
KIDNEY 		(7)
LIVER 		(1)
LUNG 		(5)
LYMPH 		(16)
OTHER 		(1)
OTHER.ip 		(5)
OTHER.mut 		(1)
OVARY 		(3)
PIWI.ip 		(4)
SKIN 		(8)
SPLEEN 		(14)
TESTES 		(3)
THYMUS 		(2)
UTERUS

Sense strand
TATACAGTGGGTAAAGCTTGCAAGTTCAGTTAGCAAGTACCCATGCTTTTACTGCGAGGACCAGAGCCAGCGTGAGTCAGGAGGTTCACAGGCTCGAGGAGCACACCTAGAGAAGAAAGGGAGGAGCGTAAGCAGGGCGGCTGGGGGGAGGCGCAGAGACTGAGCTGCTCAGTGCGCGCTTGTGTCTGTCTGGCTCCCAGTCTCTGCTGAGAACCTGCAGAAGAGCTTAGATCAGATGAAGAAGCAGATT
......................................................................................................................................(((.(((..((.((((((((....((((((...))))))..)))))....))).))..))))))....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverWT1()
Liver Data. (liver)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverWT3()
Liver Data. (liver)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR553584(SRX182790)
source: Heart. (Heart)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR206939(GSM723280)
other. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR206941(GSM723282)
other. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		GSM566419(GSM566419)
"Endougenous small RNA from mouse NIH3T3 cells, without MHV-68 infection". (fibroblast)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		mjTestesWT2()
Testes Data. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR060845(GSM561991)
total RNA. (brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGT.................................................22173.0073.003.004.00-2.003.00--2.002.003.001.003.002.00-2.00----1.00----1.001.002.003.00-1.001.00-2.00----1.00---1.00-----2.002.001.00-2.00----1.001.002.002.00-1.00--2.001.001.001.00-2.00--1.00--1.001.00-1.00-1.00---1.00-1.00-----------------------1.00-----------1.001.00--1.00--
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGA.................................................22137.0016.00---1.003.001.00-1.004.001.002.00---1.00--4.003.001.004.00---------2.00-----2.00---1.00-2.001.00-------------------1.00-----------------1.00------------------------1.00----------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAG..................................................21116.0016.00----1.002.00-1.00--1.00-------1.00-----1.00-----------------1.00-------1.00--1.00---1.00---1.00---1.00----1.00---------------------------------1.00-------------1.00----------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGAA................................................2317.0016.00----------1.00--------1.00--------------1.00--1.00-------2.00----1.00------------------------------------------------------------------------------
..................................................................................................................................................................................CTTGTGTCTGTCTGGCTCCCAGT.................................................2316.006.00-1.00----------1.00-------------1.00--------------------------------------------1.00-------------1.00------------------------------1.00------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTT................................................2316.0073.00-1.00----1.00---------------------------1.00--1.00-----------------------------------------------------------------1.00-------------1.00-----------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCTTAGATC.................2616.006.00--1.00----------1.00-------2.00---------------------------------2.00-------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGATCAGATGAAGAAGCAGATT2215.005.00---2.00--------------------------------------------------1.00-----2.00--------------------------------------------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCTTAGATCA................2715.005.00--1.00----------2.00-------1.00-----------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGTCTCTGCTGAGACTG...................................185.000.00--------------------------------------2.00-----------------------2.00--------------------------------------------------1.00---------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTA................................................2314.0073.00----------1.00-------------1.00--------------------------------------1.00-------------------------------------------1.00---------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTTAG..............................................2514.0073.00----------------4.00----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CAGAAGAGCTTAGATCAGATGA...........2213.003.003.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGAT................................................2313.0016.00------------1.00------------------------------1.00----------------------------------------------1.00--------------------------------------
..........................................................................................................................................................................................................................AGAAGAGCTTAGATCAGATGAAGA........2413.003.00-----------------------3.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GCAGAAGAGCTTAGATC.................1713.003.003.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AGCTTAGATCAGATGAAGA........1913.003.002.00-----1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTAA...............................................2413.0073.00----------------------------------1.00----1.00------1.00----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GAGCTTAGATCAGATGAAGA........2013.003.00-------------------------------3.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTTT...............................................2413.0073.00-----1.00-1.00-1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCCGT.................................................2213.002.00------------1.00------------2.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTTGTGTCTGTCTGGCTCCCAGTAA...............................................2513.006.00----------------------3.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCTGCAGAAGAGCTTAGA...................1822.502.502.50--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGC.................................................2212.0016.00-----1.00--------------------------------------------------------------------------------------1.00------------------------------------
.....AGTGGGTAAAGCTTGCAAGTT................................................................................................................................................................................................................................2112.002.00------2.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTAT...............................................2412.0073.00-2.00-------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TGCTGAGAACCTGCAGAAGAGCTTA.....................2512.002.00-------------------------------------------------------------------------------------------1.00-------------1.00-----------------------
.................................................................................................................................................................................................................................CTTAGATCAGATGAAGAAGCA....2112.002.00------2.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCTTAGATCAGAT.............3012.002.00----------------------------------------------------------------------------------------------1.00----1.00-----------------------------
..................................................................................................................................................................................CTTGTGTCTGTCTGGCTCCCAGA.................................................232.000.00---1.00------------------------------------------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCT.......................2012.002.00-----------------------------------2.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGAAG...............................................2412.0016.00-------1.00-----------------------------------------------------------------------------------------------------1.00-------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGAAT...............................................2412.0016.00-------1.00----------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTTAT..............................................2512.0073.00---------1.00---------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................TGTGTCTGTCTGGCTCCCAGT.................................................2112.002.00--------------------------------------------------------------------2.00------------------------------------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCTTAGATCAGA..............2912.002.00--1.00------------------------------1.00-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTTCA..............................................2512.0073.00---------------2.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TGTCTGTCTGGCTCCCAGAGT...............................................212.000.002.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTTTT..............................................2512.0073.00-----------------------------------------2.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCC....................................................1912.002.00--------------------------------1.00------------------------------------------------------------1.00-----------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCTTT.....................221.000.00--1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................CGGCTGGGGGGAGGCCCG...............................................................................................181.000.00----------------------------------------1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................................................TGCTGAGAACCTGCAGAAGAGCTTAG....................2611.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GATCAGATGAAGAAGCAGA..1911.001.00-----------------------------------------------------------------------------------------------------1.00---------------------------
............................................................................................................................................................................................................TGCTGAGAACCTGCAGAAGAGCTTAGATCAGATGA...........3511.001.00-------------------------------------------------------------------1.00-------------------------------------------------------------
................................................................................................................................................GGGGAGGCGCAGAGACTGAG......................................................................................2011.001.00-----------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GAGAACCTGCAGAAGAGCTTAGATCAGAT.............2911.001.00-----------------------------------------------------------------------------------------------------------------------1.00---------
.............................................................................................................................................................................................................................AGAGCTTAGATCAGATGAAGAAGCAGATT2911.001.00----------------------------------------------------------------------------------------1.00----------------------------------------
....................................................................................................................................................................................TGTGTCTGTCTGGCTCCCAGA.................................................2111.001.00--------1.00------------------------------------------------------------------------------------------------------------------------
......................................................CGAGGACCAGAGCCAGCGTGAGTCAGGA........................................................................................................................................................................2811.001.00-------------------------------------------------------------------------------------------------------------------------------1.00-
.................................................................................................................................................................................................................AGAACCTGCAGAAGAGCT.......................1821.001.00----------------------1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GATCAGATGAAGAAGCAGATT2111.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCT...................................................2011.002.00----------------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GCAGAAGAGCTTAGATCAGATGA...........2311.001.00-----------------------------------------------------------------------------1.00---------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCCG..................................................2111.002.001.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCA...................................................2011.001.00----------------------------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCTTAGATCAG...............2811.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGTGTCTGTCTGGCTCCCAAAA................................................221.000.00----------------------------------------------------------------------------------------------------------------------------1.00----
............................................................................................................................................................................................................TGCTGAGAACCTGCAGAA............................1811.001.00---------------------------------------------------------------------------------------------------------------1.00-----------------
........................................................................................................................................GCGGCTGGGGGGAGGAT.................................................................................................171.000.00-----------------------------------------------------------------------------------------1.00---------------------------------------
.............................................................................................................................................................................................................................AGAGCTTAGATCAGATGAAGA........2111.001.00------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AACCTGCAGAAGAGCTTAGATCAGATG............2711.001.00---------------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................GGGGAGGCGCAGAGACTGAT......................................................................................201.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GGGGAGGCGCAGAGACTGAGTAA...................................................................................2311.001.00-------------------------------------------------1.00-------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TAGATCAGATGAAGAAGCAGAT.2211.001.00-----------------------------------------------------1.00---------------------------------------------------------------------------
........................................................................TGAGTCAGGAGGTTCCAT................................................................................................................................................................181.000.00-------------------------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................................................................................................CTGCTGAGAACCTGCAGAA............................1911.001.00----------------------------------------------------------------------------------------------------1.00----------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAT..................................................2111.001.00----------------------------------------------------------------------1.00----------------------------------------------------------
............................................................................................................................................................................................................TGCTGAGAACCTGCAGAAGAGCTTAGAT..................2811.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GGGGGAGGCGCAGAGAATAG.......................................................................................201.000.00-------------------------------------------------------------------------------------------------1.00-------------------------------
..................................................................................................................................................................................CTTGTGTCTGTCTGGCTCCCAGTAAG..............................................2611.006.00-----1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGTGTCTGTCTGGCTCCCAG..................................................2011.001.00------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................................................................................................GAAGAGCTTAGATCAGATGAAGAAGC.....2611.001.00---------------------------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GAGCTTAGATCAGATGAAGAA.......2111.001.00----------------------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................GCTCGAGGAGCACACCTAGAG..........................................................................................................................................2111.001.00------------------------------------1.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GAGAACCTGCAGAAGAGCTT......................2011.001.00--------------1.00------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................AAGAGCTTAGATCAGATGAAGAAGCAG...2711.001.00--------------------------------------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................GAGAACCTGCAGAAGAGCTTAGAT..................2411.001.00---------------------------------------1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGTCTCTGCTGAGAACCTGCAGA.............................2311.001.00---------------------------------------1.00-----------------------------------------------------------------------------------------
................................................................................................................................................GGGGAGGCGCAGAGACTGAGCTA...................................................................................2311.001.00----------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TTAGATCAGATGAAGAAGCAGA..2211.001.00----------------------------1.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGTCTCTGCTGAGACT....................................171.000.00-----------------------------------------------------------------------------------------------------------------------------1.00---
.............................................................................................................................................................................................................GCTGAGAACCTGCAGAAGAGCTT......................2311.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACCTGCAGAAGAGCTTAGATCAGT..............241.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGAGTT..............................................2511.0016.00------------------------------------------------------------------------------------------------------------------------1.00--------
....CAGTGGGTAAAGCTTCAGA...................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................................................................................................CAGAAGAGCTTAGATCAGATGAAGAAGCAGAT.3211.001.00--------------------------------------------1.00------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGTAAT..............................................2511.0073.00-----------------------------------------------------------------------------------------------1.00---------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCCGA.................................................2211.002.00---------------------------------------------------------------------------------------1.00-----------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCATAA................................................2311.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GGGGAGGCGCAGAGACTGAGCT....................................................................................2211.001.00-------------------1.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CTGAGAACCTGCAGAAGAGCTTAG....................2411.001.00-----------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGAAAT..............................................2511.0016.00---1.00-----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GAGCTTAGATCAGATGAAGAAGC.....2311.001.00----------------------------------------------------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAGCTTAGATCAGATGAAGAAG......2311.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GGGGGAGGCGCAGAGACTGAG......................................................................................2111.001.00-------------------------------------------------------------------------------------------------------------------------1.00-------
.....................................................................................................................................................................................................CAGTCTCTGCTGAGATCG...................................181.000.00--------------------------------------1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTTGTGTCTGTCTGGCTCCCAGG.................................................231.000.00------------------------------------------------------------------------------------------------1.00--------------------------------
..........................................................................................................................................................................................................................AGAAGAGCTTAGATCAGATGAATA........241.000.00-----------------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTTGTGTCTGTCTGGCTCCCAGAT................................................241.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGAACCTGCAGAAGAGCTTAGATCAGATG............2911.001.00--------------------------------------------------------------------------------------------------1.00------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGAAA...............................................2411.0016.00-----------------------------1.00---------------------------------------------------------------------------------------------------
............................................................................................................AGAGAAGAAAGGGAGGAGCGT.........................................................................................................................2111.001.00--------------------------------------------------------------------------1.00------------------------------------------------------
...................................................................................................................................................GAGGCGCAGAGACTGA.......................................................................................1611.001.00-----------------------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GAGAACCTGCAGAAGAGCTTAGATCA................2611.001.00-------------------------------------------------------------------------------1.00-------------------------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGC........................1911.001.001.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGATA...............................................2411.0016.00-------------------------------------------------------------------------------------------------------------------1.00-------------
.....AGTGGGTAAAGCTTGCAAG..................................................................................................................................................................................................................................1911.001.00------------------------------------------------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................TGAGAACCTGCAGAAGAGCTTAGATCAGT..............2911.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTGTGTCTGTCTGGCTCCCAGATT...............................................2411.0016.00------------------------------------------------------------------1.00--------------------------------------------------------------
....................................................................................................................................................................................................................ACCTGCAGAAGAGCTTAG....................1820.500.50----------0.50----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAGCTTAGATCAGATG............1730.330.33--------------------------------------------------------------------------------------------------------------------------------0.33
.........................................................................................................................................................................................CTGTCTGGCTCCCAGT.................................................1650.200.20------------0.20--------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AGAAGAGCTTAGATC.................1580.120.12-------------------------0.12-------------------------------------------------------------------------------------------------------

Antisense strand
TATACAGTGGGTAAAGCTTGCAAGTTCAGTTAGCAAGTACCCATGCTTTTACTGCGAGGACCAGAGCCAGCGTGAGTCAGGAGGTTCACAGGCTCGAGGAGCACACCTAGAGAAGAAAGGGAGGAGCGTAAGCAGGGCGGCTGGGGGGAGGCGCAGAGACTGAGCTGCTCAGTGCGCGCTTGTGTCTGTCTGGCTCCCAGTCTCTGCTGAGAACCTGCAGAAGAGCTTAGATCAGATGAAGAAGCAGATT
......................................................................................................................................(((.(((..((.((((((((....((((((...))))))..)))))....))).))..))))))....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverWT1()
Liver Data. (liver)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverWT3()
Liver Data. (liver)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR685340(GSM1079784)
"Small RNAs (15-50 nts in length) from immort. (dicer cell line)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR553584(SRX182790)
source: Heart. (Heart)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR206939(GSM723280)
other. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR206941(GSM723282)
other. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037904(GSM510440)
brain_rep1. (brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		GSM566419(GSM566419)
"Endougenous small RNA from mouse NIH3T3 cells, without MHV-68 infection". (fibroblast)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		mjTestesWT2()
Testes Data. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR060845(GSM561991)
total RNA. (brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
..........................................................................................................................................................................................TGTCTGGCTCCCAGTCTCT............................................. 191.000.00------------------------------------------------------------------------------------------------------1.00--------------------------
.......................................................................................................................................................................CTCAGTGCGCGCTTGTTGT................................................................ 191.000.00-----------------------------------------------------------------------------------1.00---------------------------------------------
............................................................................................................................................................................................TCTGGCTCCCAGTCTCTGAGGC........................................ 221.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................ACCAGAGCCAGCGTGGA.............................................................................................................................................................................. 171.000.00--------------------------------------------------------1.00------------------------------------------------------------------------
...............................................................................................................................................................CTGAGCTGCTCAGTGCCGC........................................................................ 191.000.00----------------------------------------------------------------------------------1.00----------------------------------------------
................................................................................................................................................................................................GCTCCCAGTCTCTGCTGGC....................................... 191.000.00----------------------------------------------------------------------------------------------------------------1.00----------------
.................................................................................................................................................................................................CTCCCAGTCTCTGCTGAGGCT.................................... 211.000.00---------------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................GAGGTTCACAGGCTC........................................................................................................................................................... 1590.110.11--------------------------------------------0.11------------------------------------------------------------------------------------