ID: mmu-mir-6976
GENE: Srf(5)
chr17:46690726-46690975-


(1)
AGO.mut
(2)
AGO1.ip
(23)
AGO2.ip
(2)
AGO3.ip
(14)
B-CELL
(37)
BRAIN
(7)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(12)
EMBRYO
(4)
ESC
(7)
FIBROBLAST
(1)
HEART
(8)
LIVER
(1)
LUNG
(4)
LYMPH
(23)
OTHER
(9)
OTHER.mut
(1)
OVARY
(2)
PANCREAS
(1)
PIWI.ip
(3)
PIWI.mut
(6)
SKIN
(9)
SPLEEN
(21)
TESTES
(1)
THYMUS
(6)
TOTAL-RNA
(1)
UTERUS

Sense strand
GTTCCTGTTTGCTTGGGGTACCTGCAGGACATAAGTAGTTTCTCTGCTTCCAGCTCTCCTTGAGCTATCTAGATAGGACCCTGCTACAGTCCCTAGAGAGATAGATGAAGGTCACCCTAGGAGTCACCATATAATTTTTCCCCAGGGAAGTTGAGAGGAAAATTGTCGCTGACCTGCCCATCTCCCTCCCAACTCCCCAGGCCTATGAGCTGTCCACGCTGACAGGGACACAGGTGCTGTTGCTGGTGGC
................................................................................................................................................(((.(((((.((((.....((..((......)).))....)))).))))).)))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
mjTestesWT4()
Testes Data. (testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
GSM416732(GSM416732)
MEF. (cell line)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
mjLiverWT3()
Liver Data. (liver)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR073955(GSM629281)
total RNA. (blood)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
mjTestesWT3()
Testes Data. (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR206942(GSM723283)
other. (brain)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR306526(GSM750569)
19-24nt. (ago2 brain)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR206940(GSM723281)
other. (brain)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR060845(GSM561991)
total RNA. (brain)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR059768(GSM562830)
Treg_control. (spleen)
GSM475281(GSM475281)
total RNA. (testes)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR206941(GSM723282)
other. (brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGT.................................................221102.005.0017.004.002.00--2.003.002.001.005.007.005.007.00---4.00-3.00-6.00-1.002.002.00-----1.001.002.00-1.00-4.003.00--1.00-1.00---1.00-----1.00------------------1.00-----1.00-----------2.00--1.001.00--1.00---------------1.00----------------1.001.00--------------1.00-------1.00------1.00----
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGT.................................................21175.002.008.007.004.00--6.00---2.006.004.002.00-----4.00-2.00-1.001.00--------1.001.00--1.00------2.002.00-2.00-----1.00--------1.001.00--------------2.00----------------1.00-1.00--1.00-1.001.00-------1.00--------1.00--1.00------------------1.001.001.00--1.00---------1.00-1.00------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATTG.....................................................................................23156.0056.00------2.001.002.001.00-1.001.004.00--1.003.00--------2.001.00-3.002.001.00--1.001.00-1.00--1.00-1.00--2.00--------3.00--1.002.00----2.00--2.00---1.001.00-1.00--1.00--1.00----------1.00-------1.00-1.001.00-------------------1.00---------1.00-1.00-----------------1.00----------1.00--
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATT......................................................................................22145.0045.00----4.00-4.00------4.00-------3.00---2.00-1.001.001.00----3.001.00---2.001.00-1.00---1.003.00-1.001.00---1.00--------------1.002.00--1.00----1.00----1.00---1.00---------------------------------------1.00-----------1.00-----------------1.00-------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATTG.....................................................................................22135.0035.00----2.00----1.00--------------1.001.00-1.00-1.00-----1.00---2.00--------1.001.00---1.00--1.00-2.00-----------------1.00-1.00-2.00-2.001.00-------1.00--1.001.00--1.00-----1.001.00--1.00--1.00-------------1.00------1.00-----------------1.00--------1.00-----
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGA.................................................21127.002.00-2.005.00--1.00-4.00--------2.00-----1.002.00----1.00------------1.00-------1.002.00----------1.00------------1.00------1.00------------------------1.00-------------------------------------1.00--------------------
......................................................................................................................................................................................................................CACGCTGACAGGGACACAGGTGCTGT..........26127.0027.00---18.00----------9.00------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATT......................................................................................21118.0018.00------1.00-3.00------------------1.002.00-1.00-2.00--1.00-----------1.00--------1.001.00-----1.002.00------------------------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGA.................................................22117.005.001.001.001.00--1.00-1.00--------------1.00--1.00----1.00--3.00---------------------1.00-1.00----------------1.00---------------1.00--1.00------------------------------------------------------------1.00----------
............................................................................................................................................CCCAGGGAAGTTGAGAGGAAAAT.......................................................................................23113.0013.001.00-1.00---1.00--1.00-1.00----1.001.00-------------3.00------2.00--1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATTGT....................................................................................23113.0013.00---------1.00-----------------1.002.00------1.00--1.00-1.00------------2.00-1.00-------------1.00-----------------1.00------------------------------------1.00----------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTT................................................22110.002.001.002.00-----2.00----1.00---------1.00----------1.00---------------------------1.00--------------------------------------------------------1.00----------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATTGT....................................................................................2418.008.00--------1.00----2.00------------2.00-----------------------------1.00------------1.00------------------------------------------------------------------------------1.00----------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAA..........................................................................................1917.007.00----4.00----------------2.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAAT.......................................................................................2117.007.00--------1.00-------1.00------1.001.00---------------------------------------------------------------1.00---------------1.00-----------------------1.00------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAAATT......................................................................................2317.007.00------------------------1.00----1.00--------1.001.00----------------------1.00---------1.00------------------1.00-------------------------------------------------------------------------
............................................................................................................................................CCCAGGGAAGTTGAGAGGAAA.........................................................................................2116.006.00---------------------3.00----------1.00-----------1.00----------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAAAT.......................................................................................2216.006.00------1.001.00------------------2.00-----------------1.00-----------------------------------------------------------------------1.00------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATTT.....................................................................................2316.0045.00----6.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAG..................................................2115.005.00-----1.00--1.00-------------1.00--------------------------------------------------1.00--------------1.00----------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAAT.......................................................................................2015.005.00--------1.00-----------------------------------------------------------3.00----------------------------------1.00-------------------------------------------------------------
................................................................................................................................................GGGAAGTTGAGAGGAAAATTG.....................................................................................2115.005.00---------------------------1.00--------------------------------4.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGAA................................................2215.002.00-1.00---1.00------------------------1.00------------------1.00-------------------------------------------------------------------------------------------------1.00-----------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAAATTG.....................................................................................2413.003.00----1.00------------------------------1.00--------------------1.00------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GGGACACAGGTGCTGCATG.......193.000.00-------------------1.00----------------------------------------------------------------2.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................GGGACACAGGTGCTGCAT........183.000.00-----------------3.00---------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCCAGGGAAGTTGAGAGGAA..........................................................................................2013.003.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------1.00-----------1.00---
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTTT...............................................2313.002.00-1.00-------------------------------------------------------------------------------------------------1.00----------------------------------1.00------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGAAT...............................................2313.002.00-----------------------------------------1.00------------------------------------------------------------1.00-----------------------1.00--------------------------------------
..............................................................................................................................................................................................................................CAGGGACACAGGTGCTGCAT........203.000.00-------------------3.00-------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGTA................................................2313.005.00--2.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAA........................................................................................2013.003.00-------------------------1.00----------------------------------------1.00-----------------------------------------------------------------------1.00--------------------------
...............................................................................................................................................................................................................................AGGGACACAGGTGCTGCAT........193.000.00-------------------2.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTA................................................2213.002.00-------1.00-----------------------------------2.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCATT.................................................223.000.00-1.00------1.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTAA...............................................2313.002.00-3.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAA.........................................................................................2013.003.00--1.00-----------------------1.00------------------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGAA................................................2312.005.00--------1.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATTT.....................................................................................2212.0018.00-------------------------------------------------------------------2.00-------------------------------------------------------------------------------------------------
........................CAGGACATAAGTAGTTCCG...............................................................................................................................................................................................................192.000.00-------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAAA........................................................................................2112.002.00---------------------------------------------------------------------------1.00--------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAG..................................................2012.002.00-----1.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGTAA...............................................2412.005.00----------------------------------------------------2.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CATCTCCCTCCCAACTCCCCAGT.................................................232.000.00---------1.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAAATTGTCGCTGACCTGCCCATCTCCCTCCCAACTCCCCAGT.................................................602.000.00-----------------------------------------------------------2.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCCTCCCAACTCCCCAGAAT...............................................212.000.00-----1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAT.........................................................................................2012.007.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CCCAGGGAAGTTGAGAGGAAAA........................................................................................2212.002.00-------------------------1.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAAAATTGTCGCTGACCTGCCCATCTCCCTCCCAACTCCCCAGA.................................................602.000.00-----------------------------------------------------------2.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGAAA...............................................2312.002.00------1.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGACAGGGACACAGGTGCTGTTGCTGA....2711.001.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGACAGGGACACAGGTGCTGTTGCTG.....2611.001.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCCGT.................................................201.000.00-----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................GAGCTGTCCACGCTGACAGGGAC.....................2311.001.00---------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................TGCTACAGTCCCTAGATCT......................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGTAAA........................................................................................211.000.00------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTAT...............................................2311.002.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................CAGTCCCTAGAGAGACTG..................................................................................................................................................181.000.00--------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCCTCCCAACTCCCCAGAATT..............................................221.000.00-----------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCAGAAAA..............................................231.000.00------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................ATGAGCTGTCCACGCTGTT...........................191.000.00--------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATTAT....................................................................................2311.0018.00--------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................GACAGGGACACAGGTGCTGCA.........211.000.00-----------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATTGTT...................................................................................2411.0013.00-------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCATA.................................................201.000.00-------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................ACACAGGTGCTGTTGCTGGTGG.2211.001.00--------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCAGAG................................................211.000.00--------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CACGCTGACAGGGACACAGGTGCTTT..........261.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGAATAC.......................................................................................2211.007.00------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................ACACAGGTGCTGTTGCTGGTGGT2311.001.00--------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGAGT...............................................2311.002.00---------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCAGAGA...............................................221.000.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAGTTG.....................................................................................2211.001.00-------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGTAT...............................................2411.005.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGTT................................................2311.005.00---------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAAG.................................................221.000.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................TGAGCTGTCCACGCTGACAGGGACAC...................2611.001.00---------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCACAAT...............................................231.000.00-----------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TATGAGCTGTCCACGCTGACAGGGA......................2511.001.00----------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCAGTTT...............................................221.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGTCCACGCTGACAGGGACACAGGTG..............2611.001.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCCGT.................................................2211.001.00----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGACAGGGACACAGGTGCTGTTGCTA.....261.000.00-----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TCCACGCTGACAGGGACACAGGTGC.............2511.001.00-----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
...........................................CTGCTTCCAGCTCTCCTTGAGCT........................................................................................................................................................................................2311.001.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTTAA..............................................2411.002.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCATT.................................................211.000.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CACGCTGACAGGGACACAGGTGCTG...........2511.001.00-----------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGTTT...............................................2411.005.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................TGAGCTGTCCACGCTGACAGGGACACA..................2711.001.00-----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCATTAA...............................................231.000.00--------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGATT...............................................2311.002.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGCCTATGAGCTGTCGGA.................................181.000.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGCAA...............................................2311.002.00---------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAT........................................................................................201.000.00-------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTGT...............................................2311.002.00---------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATCG.....................................................................................2211.005.00----------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
............................................................................................................................................CCCAGGGAAGTTGAGAGGAAT.........................................................................................2111.003.00-----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCC....................................................1911.001.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CAGGTGCTGTTGCTGGTGGTA211.000.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAGAAC...............................................2411.005.00--------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCAGA.................................................201.000.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAGAT........................................................................................191.000.00-------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
...................................................................................................................................................................................ATCTCCCTCCCAACTCCCCAAA.................................................221.000.00-------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................ACAGGTGCTGTTGCTGGCGGA211.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................ATGAGCTGTCCACGCTGACAGGGACACAGGT...............3111.001.00---------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................................................TGACAGGGACACAGGTGCTG...........2011.001.00---------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGAT................................................2211.002.00-----------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------
.....................................................................................................................................................................................................................................ACAGGTGCTGTTGCTGGTGGC2111.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCCTCCCAACTCCCCAGT.................................................191.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCCTCCCAACTCCCCAGAAC...............................................211.000.00-----------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAA.........................................................................................1811.001.00---------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................ACACAGGTGCTGTTGCTGGTGGACA2511.001.00-----------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGAGA...............................................2311.002.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCAGAA................................................211.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................TGAGCTGTCCACGCTGACAGGGACACAG.................2811.001.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATTGTA...................................................................................2511.008.00--------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATG......................................................................................2211.007.00------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTC................................................2211.002.00----------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
................GGTACCTGCAGGACATCGA.......................................................................................................................................................................................................................191.000.00---------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CTGACAGGGACACAGGTG..............1811.001.00-------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATTGA....................................................................................2311.0035.00---------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCCTCCCAACTCCCCAGAAT...............................................221.000.00----------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................CAGGGACACAGGTGCTGCATG.......211.000.00------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGTAAT..............................................2411.002.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATTA.....................................................................................2311.0045.00----------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGGGAAGTTGAGAGGAAAATAA.....................................................................................2211.005.00--------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
.............................................................................................................................................CCAGGGAAGTTGAGAGGA...........................................................................................1820.500.50-----------------0.50---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGA...........................................................................................1730.330.33------------------------------------------------------------------------------0.33--------------------------------------------------------------------------------------

Antisense strand
GTTCCTGTTTGCTTGGGGTACCTGCAGGACATAAGTAGTTTCTCTGCTTCCAGCTCTCCTTGAGCTATCTAGATAGGACCCTGCTACAGTCCCTAGAGAGATAGATGAAGGTCACCCTAGGAGTCACCATATAATTTTTCCCCAGGGAAGTTGAGAGGAAAATTGTCGCTGACCTGCCCATCTCCCTCCCAACTCCCCAGGCCTATGAGCTGTCCACGCTGACAGGGACACAGGTGCTGTTGCTGGTGGC
................................................................................................................................................(((.(((((.((((.....((..((......)).))....)))).))))).)))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
mjTestesWT4()
Testes Data. (testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
GSM416732(GSM416732)
MEF. (cell line)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
mjLiverWT3()
Liver Data. (liver)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR073955(GSM629281)
total RNA. (blood)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
mjTestesWT3()
Testes Data. (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR206942(GSM723283)
other. (brain)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR306526(GSM750569)
19-24nt. (ago2 brain)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR206940(GSM723281)
other. (brain)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR060845(GSM561991)
total RNA. (brain)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR059768(GSM562830)
Treg_control. (spleen)
GSM475281(GSM475281)
total RNA. (testes)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR206941(GSM723282)
other. (brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
.............................................................................ACCCTGCTACAGTCCCTAGAGAGA..................................................................................................................................................... 2419.009.00---------------9.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CAACTCCCCAGGCCTATGAGCTGTCCAA................................. 282.000.00-------------------------------------------------------------------------------------------------2.00-------------------------------------------------------------------
..............................................................................................................................................CAGGGAAGTTGAGAGGAAAATT...................................................................................... 2211.000.00-------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCCCTCCCAACTCCCCAGG................................................. 2111.001.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................GCTTCCAGCTCTCCTTAC........................................................................................................................................................................................... 181.000.00--------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CCCATCTCCCTCCCAACTCCCCAGGCCTA............................................. 2911.001.00-------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
...............GGGTACCTGCAGGACATAAGTAGTTTCTCT............................................................................................................................................................................................................. 3011.001.00-----------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
........................................................................................................................................................................................CCTCCCAACTCCCCAGGC................................................ 1820.500.50-------------------------------------0.50-------------------------------------------------------------------------------------------------------------------------------
..............................................................................CCCTGCTACAGTCCC............................................................................................................................................................. 1550.200.20-------------------------------------------------------------------------------------------------------------------------------------------------------------------0.20-
..................................................CAGCTCTCCTTGAGC......................................................................................................................................................................................... 15100.100.10--------------------------------------------------------------------------------------------------------------------------------------------------------------------0.10