ID: mmu-mir-6931
GENE: Dcakd(2)
chr11:102861112-102861513-


(1)
AGO.mut 		(3)
AGO1.ip 		(15)
AGO2.ip 		(2)
AGO3.ip 		(9)
B-CELL 		(35)
BRAIN 		(4)
CELL-LINE 		(2)
DCR.mut 		(2)
DGCR8.mut 		(10)
EMBRYO 		(12)
ESC 		(1)
FIBROBLAST 		(1)
HEART 		(1)
KIDNEY 		(4)
LIVER 		(1)
LUNG 		(4)
LYMPH 		(18)
OTHER 		(1)
OTHER.ip 		(7)
OTHER.mut 		(5)
PIWI.ip 		(2)
PIWI.mut 		(4)
SKIN 		(5)
SPLEEN 		(28)
TESTES 		(1)
THYMUS 		(1)
UTERUS

Sense strand
CCAACAGCTGGGCTGTGCTGTAATCGACGTGGACGTCATTGCGCGGCACGGTGAGTGCACAGCAGCGTCCCCTGTGCTTCCATCGTTAGACTCTGTCTTCTTAGAGTGTCCTGGCCTCCGCTTACCCTGGAGGTTCTTCTGCTTATTCTTCATCCTCCTCACGATCCAGTCGTCCTAAACTCAGCTCCATCACCGGCTTGAGGGAGTCCTTGTGCTCTGCTCTGCCCCTTCGTTTATTTTGGCTCCAACCAAAGAAAGAGCCTTGGAGTCCCCCGTCAGTCACTGGGGTGGGGAGTGGGGGACTTCTGAATCACTAGAGGCTCTGGAATGACCCAACCTCTTCATACCCCAGTTGTCCAGCCAGGGTATCCTGCCCACCGGCGTATAGTAGAGGCCTTTGGC
.................................................................................................................................................................................................................................................................................................................(((.......(((((...(((......))).)))))........)))..................................................
...........................................................................................................................................................................................................................................................................................................300.................................................352................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR206942(GSM723283)
other. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR206941(GSM723282)
other. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR206940(GSM723281)
other. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR037925(GSM510463)
e9p5_rep3. (embryo)
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAGT.................................................22165.0065.007.00-3.00-3.00---1.00---1.00-2.00-2.00---6.006.00-1.00---1.001.00--1.00------------1.00-1.00--1.001.003.00-2.00--1.00---1.00--2.002.001.002.001.00--------1.00----1.001.00---1.00---------------1.00-----1.00----1.00-1.00---1.00-------1.001.00----------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAGA.................................................22134.002.002.00-1.0010.001.00-------1.00-2.00--------3.00---2.001.00---3.00---1.00--1.00---------1.001.00-1.00----1.00------------1.00-----------------------------------------------------1.00--------------
.....................AATCGACGTGGACGTCATT..........................................................................................................................................................................................................................................................................................................................................................................19119.0019.00--3.00--3.006.00-1.001.00-4.00-1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGG............................................................................22114.0014.00--------------1.00---------2.00--------2.00-3.00------------1.00----------------1.00---------------------------------1.00----------1.00------1.00--------------1.00------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGACT..................................................................................................21112.0012.001.00------------------------------2.00----1.00---2.00----1.00---------------------1.00------1.00----1.00------------1.001.00---------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGA...........................................................................2319.009.00--------------1.00--2.00----------2.00---------1.00--1.00-----------1.00-----------------------------------------------------1.00-------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTC...............................................................................1918.008.001.00-----1.00-----3.00-----1.00------------------------------1.00----------1.00------------------------------------------------------------------------------
..................TGTAATCGACGTGGACGTCATTGCGC......................................................................................................................................................................................................................................................................................................................................................................2617.007.00-5.00--------1.00-----------1.00--------------------------------------------------------------------------------------------------------------------
....................TAATCGACGTGGACGTCATTGCGCGGC...................................................................................................................................................................................................................................................................................................................................................................2717.007.00----------3.00---------------1.00--------------2.001.00------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ATGACCCAACCTCTTCATACCCCAG..................................................2516.006.001.00---------------1.001.00---------1.00--------------------2.00------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGACTTCTGAATCACTAGAGGCTCTGGAATGACCCAACCTCTTCATACCCCAGA.................................................706.000.00-------6.00-----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGAC...................................................................................................2016.006.00---------------1.001.00---------------------------2.00---------------------------------------1.00----------------------------------------------1.00-------
.......................................................................................................................................................................................................................................................................................................................................ATGACCCAACCTCTTCATACCCCAGT.................................................2615.005.001.00-------1.00--------2.00---------------------------1.00---------------------------------------------------------------------------------------------
........TGGGCTGTGCTGTAATCGACGTGGACGTC.............................................................................................................................................................................................................................................................................................................................................................................2915.005.00-3.00---------------------------1.00----------------------------------------------------------------------------------------1.00--------------------
.........................................................................................................................................................................................................................................................................................................................................GACCCAACCTCTTCATACCCCAGT.................................................2415.005.003.00--------------------------1.00-----------------------------------------------------------------------------------------------------1.00---------
.................CTGTAATCGACGTGGACGTCATTGCGCGGC...................................................................................................................................................................................................................................................................................................................................................................3015.005.00------------------------4.00-----------------------------------------------------------------------------------------------1.00------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCT..............................................................................2014.004.00-----------------2.00----------------------------------------2.00--------------------------------------------------------------------------------
................GCTGTAATCGACGTGGACGTCATT..........................................................................................................................................................................................................................................................................................................................................................................2414.004.00-----2.00---2.00---------------------------------------------------------------------------------------------------------------------------------
...................GTAATCGACGTGGACGTCA............................................................................................................................................................................................................................................................................................................................................................................1914.004.00------------------4.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................ACCCAACCTCTTCATACCCCAGT.................................................2314.004.00-------------------------------------------2.00----------2.00------------------------------------------------------------------------------------
..............GTGCTGTAATCGACGTGGACGTCA............................................................................................................................................................................................................................................................................................................................................................................2414.004.00----1.00---2.00-1.00--------------------------------------------------------------------------------------------------------------------------------
..AACAGCTGGGCTGTGCTGT.............................................................................................................................................................................................................................................................................................................................................................................................1914.004.00--1.00------1.00---2.00-----------------------------------------------------------------------------------------------------------------------------
...................GTAATCGACGTGGACGTCATT..........................................................................................................................................................................................................................................................................................................................................................................2113.003.00--1.00-----2.00----------------------------------------------------------------------------------------------------------------------------------
........TGGGCTGTGCTGTAATCGACGTGGACGT..............................................................................................................................................................................................................................................................................................................................................................................2813.003.00-1.00-----------------------2.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ATGACCCAACCTCTTCATACCC.....................................................2213.003.001.00-----------------------------------------------------------------------------------------1.00----1.00-------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGAAT.........................................................................2513.003.00------------1.00--------------------------------1.00----------------------------------------------------------------------1.00----------------------
.....AGCTGGGCTGTGCTGTAATCGACGT....................................................................................................................................................................................................................................................................................................................................................................................2513.003.00------1.00-------------------------------1.00------------------------------------------------------------------1.00---------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TGCCCACCGGCGTATAGTAGAGGCCT.....2613.003.00-2.00-----------------------------------------------------------------------------------------------1.00-----------------------------------------
......................ATCGACGTGGACGTCATT..........................................................................................................................................................................................................................................................................................................................................................................1813.003.00-----3.00-------------------------------------------------------------------------------------------------------------------------------------
........TGGGCTGTGCTGTAATCGACGTGGACG...............................................................................................................................................................................................................................................................................................................................................................................2713.003.00----------------------1.00---1.00--1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAGC.................................................2213.002.00--------------------------------------------------------1.00------------1.00-------------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGACTTCTGAATCACTAGAGGCTCTGGAATGACCCAACCTCTTCATACCCCAGT.................................................7013.003.00-------3.00-----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGT............................................................................2212.002.00------------------------------------------------------------------------2.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGAA..........................................................................2412.002.00-------------1.00--------------------------------------------------------------------------------------------------1.00--------------------------
..................TGTAATCGACGTGGACGTCATTGCGCGGC...................................................................................................................................................................................................................................................................................................................................................................2912.002.00----------1.00------------------------------------------------------------------------------1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGT...........................................................................2312.0014.00--------------1.00-----------------------------------------------------------------------------------1.00----------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ATGACCCAACCTCTTCATACCCCAGTA................................................2712.005.002.00------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTG.............................................................................2112.002.00------------1.00--------------------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................AGCCAGGGTATCCTGCCCACCGGCGT..................2612.002.00--1.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ATGACCCAACCTCTTCATACCCC....................................................2312.002.00----------------1.00-----------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................GGGGAGTGGGGGACTGCG...............................................................................................182.000.00---------------2.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................CTGGGGTGGGGAGTGGGGGACT..................................................................................................2212.002.00----------------1.00----------------1.00---------------------------------------------------------------------------------------------------------
................GCTGTAATCGACGTGGACGT..............................................................................................................................................................................................................................................................................................................................................................................2012.002.00--------1.00----1.00-----------------------------------------------------------------------------------------------------------------------------
............................GTGGACGTCATTGCGCGGC...................................................................................................................................................................................................................................................................................................................................................................1912.002.00---------1.00-1.00-------------------------------------------------------------------------------------------------------------------------------
..........GGCTGTGCTGTAATCGACGTGGACG...............................................................................................................................................................................................................................................................................................................................................................................2512.002.00---------------2.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGACTTTTTT.............................................................................................262.000.00----------------------------------------------1.00--------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................GACCCAACCTCTTCATACCCCCG..................................................232.000.00-----------------------1.00-------------------1.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAG..................................................2112.002.00----------------------------------------------------------------------------------------1.00--------------------1.00-----------------------------
...........................CGTGGACGTCATTGCGCGGCACG................................................................................................................................................................................................................................................................................................................................................................2312.002.00---------------2.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................TATAGTAGAGGCCTTTGG.1821.501.50------------------1.50------------------------------------------------------------------------------------------------------------------------
.......CTGGGCTGTGCTGTAATCGACGTGGACGTCA............................................................................................................................................................................................................................................................................................................................................................................3111.001.00---------------------------------------1.00---------------------------------------------------------------------------------------------------
................................................................................CATCGTTAGACTCTGGCA................................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------------------1.00--------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGAGT..................................................................................................211.000.001.00------------------------------------------------------------------------------------------------------------------------------------------
.........GGGCTGTGCTGTAATCGACGTGGA.................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------------------------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GGGTGGGGAGTGGGGGACTTC................................................................................................2111.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................AGCCAGGGTATCCTGCCCACCGG.....................2311.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGACTTT................................................................................................231.000.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................CCAACCTCTTCATACCCCAGG.................................................211.000.00------------1.00------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................GAATCACTAGAGGCTCTGGAAT.........................................................................2211.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGAATGAC......................................................................2811.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................AATGACCCAACCTCTTCATATCCC....................................................241.000.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------
........................CGACGTGGACGTCATT..........................................................................................................................................................................................................................................................................................................................................................................1611.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------
........TGGGCTGTGCTGTAATCGACGTGGACGTT.............................................................................................................................................................................................................................................................................................................................................................................2911.003.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................ACCGGCGTATAGTAGAGGCCTTTGGC2611.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
......GCTGGGCTGTGCTGTAATCGACGTGGACGTC.............................................................................................................................................................................................................................................................................................................................................................................3111.001.00------------------------------------------------------------------------------1.00------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTTT............................................................................2211.004.00----------------------------------------------------------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................................................................................................................................................................TGGAATGACCCAACCTCTTCAT.........................................................2211.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................TGACCCAACCTCTTCATACCCCAG..................................................2411.001.00-------------------------------------------------------------------------------------------------------1.00-----------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................ACCGGCGTATAGTAGAGGCCTTT...2311.001.00------------------------------------------------------------------------------1.00------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TAGAGGCTCTGGAATGACCCAAC.................................................................2311.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------
....CAGCTGGGCTGTGCTGTAATCGACGT....................................................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGGGTGGGGAGTGGGGGACAA.................................................................................................211.000.00------------------------------------------------------------------------------------------------------------------1.00------------------------
..............GTGCTGTAATCGACGTGGACGTC.............................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................CGTGGACGTCATTGCGCGGCA..................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------
.....................AATCGACGTGGACGTCATTGCGCGGC...................................................................................................................................................................................................................................................................................................................................................................2611.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................AGAGTGTCCTGGCCTCCGC.........................................................................................................................................................................................................................................................................................1911.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................TCCTGCCCACCGGCGTATAGTAGAGGC.......2711.001.00----------------------------------------------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................AGGGTATCCTGCCCACCGGCGT..................2211.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................TGGAATGACCCAACCTCTTCATACCCCAGA.................................................301.000.00---------------------------------------------------------------------------------------------------------------1.00---------------------------
.....AGCTGGGCTGTGCTGTAATCGACGTG...................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------------------------1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGACTTCTGAATCACTAGAGGCTCTGGAATGACCCAACCTCTTCATACCCCAGTTT...............................................721.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................GTAATCGACGTGGACGTCATTGCGCGG....................................................................................................................................................................................................................................................................................................................................................................2711.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAGTAA...............................................2411.0065.001.00------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCATTA................................................2311.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
........TGGGCTGTGCTGTAATCGACGTGGAC................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................TGGAATGACCCAACCTCTTCATACCC.....................................................2611.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGAATGACC.....................................................................2911.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------
...................................TCATTGCGCGGCACGTTGT............................................................................................................................................................................................................................................................................................................................................................191.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------
..............GTGCTGTAATCGACGTGGACGTCATTGC........................................................................................................................................................................................................................................................................................................................................................................2811.001.00-------------------------------------------------------------------------------------1.00-----------------------------------------------------
........................CGACGTGGACGTCATTGCGCG.....................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................TTGTCCAGCCAGGGTATCCT..............................2011.001.00--------------------------------------------------------------------------------------------------------------------------1.00----------------
...................................................................................................................................................................................................................................................................................................................................................................................TGCCCACCGGCGTATAGTAGAGGCCTT....2711.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
..................TGTAATCGACGTGGACGTCATTTCG.......................................................................................................................................................................................................................................................................................................................................................................251.000.00------------------------------------------------------------------------------------------------------------------------------1.00------------
......................................................................................................................................................................................................................................................................................................................................AATGACCCAACCTCTTCATACCCCAGC.................................................271.000.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------
............CTGTGCTGTAATCGACGTGGACGTCAAA..........................................................................................................................................................................................................................................................................................................................................................................281.000.00--------------------------------------------------------------------------------1.00----------------------------------------------------------
............................................................................CTTCCATCGTTAGACACA....................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAGCAA...............................................2411.002.001.00------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCA...................................................2011.001.001.00------------------------------------------------------------------------------------------------------------------------------------------
....................TAATCGACGTGGACGTCATTGCGCGGCAC.................................................................................................................................................................................................................................................................................................................................................................2911.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
.....................AATCGACGTGGACGTCATTGCGC......................................................................................................................................................................................................................................................................................................................................................................2311.001.00----------------------------------------1.00--------------------------------------------------------------------------------------------------
...ACAGCTGGGCTGTGCTGTAATCGACGCG...................................................................................................................................................................................................................................................................................................................................................................................281.000.00----------------------------------------------------------------------------------------------------1.00--------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGTGGGGGACTTTATA.............................................................................................191.000.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................AATGACCCAACCTCTTCATACCCCAGT.................................................2711.001.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGAATGACCC....................................................................3011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................AGAGGCTCTGGAATGACCCAACC................................................................2311.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------
........TGGGCTGTGCTGTAATCGACGT....................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------
....................TAATCGACGTGGACGTCATTGCGCGG....................................................................................................................................................................................................................................................................................................................................................................2611.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................GCGTATAGTAGAGGCCTTTGGCACC251.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------
........................CGACGTGGACGTCATTGCGCGG....................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTTGA...........................................................................2311.004.00---------------------------------------------------------------------------------------1.00---------------------------------------------------
....CAGCTGGGCTGTGCTGTAATCGACGTGGA.................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-------------------------------------------------------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................GCCCACCGGCGTATAGTAGAGGCCT.....2511.001.00---------------------------------------------------------1.00---------------------------------------------------------------------------------
...............TGCTGTAATCGACGTGGACGTCATTGTTT......................................................................................................................................................................................................................................................................................................................................................................291.000.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCGGT.................................................221.000.00---------------------------------------------------------------------1.00---------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCAT.............................................................................2111.008.00-------------------------------------------------------------------------------------------------------------------------1.00-----------------
......................................................................................................................................................................................................................................................................................................................................AATGACCCAACCTCTTCATACC......................................................2211.001.00----------------------------------------------------------------------------1.00--------------------------------------------------------------
.........................................................CACAGCAGCGTCCCCTTCGT.....................................................................................................................................................................................................................................................................................................................................201.000.00----------------------------------------------------------------------------------------------------------------------------------1.00--------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAGTAGA..............................................2511.0065.00---------1.00---------------------------------------------------------------------------------------------------------------------------------
.....................AATCGACGTGGACGTCATTGCGCGG....................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------
...ACAGCTGGGCTGTGCAG..............................................................................................................................................................................................................................................................................................................................................................................................171.000.00--------------------------------------------------------------------------------------------------------1.00----------------------------------
.......................................................................................................................................................................................................................................................................................................................................ATGACCCAACCTCTTCATACCCCAGA.................................................2611.006.00--------------------------------1.00----------------------------------------------------------------------------------------------------------
.............TGTGCTGTAATCGACGTGGACGTCA............................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCAGTTTT..............................................251.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------
.CAACAGCTGGGCTGTGCTGTAATCGAC......................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------------------------------------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................GACCCAACCTCTTCATACCCCATTT................................................251.000.001.00------------------------------------------------------------------------------------------------------------------------------------------
.....................AATCGACGTGGACGTCAT...........................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................CCCAACCTCTTCATACCCCCGC.................................................221.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................GACCCAACCTCTTCATACCCCAGA.................................................2411.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................AATGACCCAACCTCTTCATACCCCA...................................................2511.001.00----------------1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCTCTGGAATGA.......................................................................2711.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................GACCCAACCTCTTCATACCCCAG..................................................2311.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................TGACCCAACCTCTTCATACCCCAGC.................................................2511.001.001.00------------------------------------------------------------------------------------------------------------------------------------------
...ACAGCTGGGCTGTGCTGTAAT..........................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00--------------------------------
.................................CGTCATTGCGCGGCACGTTG.............................................................................................................................................................................................................................................................................................................................................................201.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................AATGACCCAACCTCTTCATACCCC....................................................2411.001.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------
.........GGGCTGTGCTGTAATCGAC......................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------------
..............GTGCTGTAATCGACGTGGACGT..............................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGGGTGGGGAGTGGGGGATAGT................................................................................................231.000.00----------------------------------------------------------------------1.00--------------------------------------------------------------------
.............................TGGACGTCATTGCGCGGCACGTTG.............................................................................................................................................................................................................................................................................................................................................................241.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TAGAGGCTCTGGAATGACCCAA..................................................................2211.001.00------------------------------------------------------------------------------------------------1.00------------------------------------------
...................GTAATCGACGTGGACGTCAT...........................................................................................................................................................................................................................................................................................................................................................................2011.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------
..AACAGCTGGGCTGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................1720.500.50-----0.50-------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TCTGAATCACTAGAGGCT................................................................................1820.500.50--------------------------------------------------------------------------------------------------------------------------------------0.50----
...........................................................................................................................................................................................................................................................................................................................AGAGGCTCTGGAATGA.......................................................................1670.290.29----------------------------------------------------------------------------------------------------------------------------------------0.140.14-

Antisense strand
CCAACAGCTGGGCTGTGCTGTAATCGACGTGGACGTCATTGCGCGGCACGGTGAGTGCACAGCAGCGTCCCCTGTGCTTCCATCGTTAGACTCTGTCTTCTTAGAGTGTCCTGGCCTCCGCTTACCCTGGAGGTTCTTCTGCTTATTCTTCATCCTCCTCACGATCCAGTCGTCCTAAACTCAGCTCCATCACCGGCTTGAGGGAGTCCTTGTGCTCTGCTCTGCCCCTTCGTTTATTTTGGCTCCAACCAAAGAAAGAGCCTTGGAGTCCCCCGTCAGTCACTGGGGTGGGGAGTGGGGGACTTCTGAATCACTAGAGGCTCTGGAATGACCCAACCTCTTCATACCCCAGTTGTCCAGCCAGGGTATCCTGCCCACCGGCGTATAGTAGAGGCCTTTGGC
.................................................................................................................................................................................................................................................................................................................(((.......(((((...(((......))).)))))........)))..................................................
...........................................................................................................................................................................................................................................................................................................300.................................................352................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR206942(GSM723283)
other. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR206941(GSM723282)
other. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR206940(GSM723281)
other. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR037925(GSM510463)
e9p5_rep3. (embryo)
.............................................................................................................................................................................................................................................................................CCCCCGTCAGTCACTCA.................................................................................................................... 176.000.00------------------------------3.00-------------------------------------2.00------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................................................................................CCCCCGTCAGTCACTCATT.................................................................................................................. 194.000.00------------------------------1.00------3.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................TTATTCTTCATCCTCCTCTCT............................................................................................................................................................................................................................................... 213.000.00-------------------3.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GTCCTTGTGCTCTGCGAG................................................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................................GTGCTCTGCTCTGCCTCTT............................................................................................................................................................................ 191.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------
..............................................................CAGCGTCCCCTGTGCTTAAT................................................................................................................................................................................................................................................................................................................................ 201.000.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................ATCCAGTCGTCCTAAACTCAGCTCCA..................................................................................................................................................................................................................... 2611.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------
..............................................................................................................................................TTATTCTTCATCCTCCTCTTT............................................................................................................................................................................................................................................... 211.000.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TATTCTTCATCCTCCTTTT................................................................................................................................................................................................................................................ 191.000.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................AACCTCTTCATACCCCAGTTGTCCAGCCA....................................... 2911.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------
.................................................................................................................................................TTCTTCATCCTCCTCAAAC.............................................................................................................................................................................................................................................. 191.000.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................GCCTTGGAGTCCCCCGTCAGTCACTGGG................................................................................................................... 2811.001.00--------------------------------------------------------------1.00----------------------------------------------------------------------------
.............................................................................................................................................CTTATTCTTCATCCTTGGT.................................................................................................................................................................................................................................................. 191.000.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------
..............................................................CAGCGTCCCCTGTGCTGCT................................................................................................................................................................................................................................................................................................................................. 191.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TCATCCTCCTCACGAGTC........................................................................................................................................................................................................................................... 181.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................TATTCTTCATCCTCCTTTG................................................................................................................................................................................................................................................ 191.000.00------------------------------------1.00------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GCTCTGCTCTGCCCCTTCGTTTATTT................................................................................................................................................................... 2611.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................GAGGTTCTTCTGCTTG................................................................................................................................................................................................................................................................. 161.000.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................CTTATTCTTCATCCTCCTGGT................................................................................................................................................................................................................................................ 211.000.00-------------------------------------------------------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................ACCTCTTCATACCCCAATGT............................................... 201.000.00---------------------------------------------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................TCATCCTCCTCACGATCCAGTCG...................................................................................................................................................................................................................................... 2311.001.00---------------------------------------------------------------------------------------------------------------------------1.00---------------
.............................................................................................................................................................................................................................................................................CCCCCGTCAGTCACTCAT................................................................................................................... 181.000.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................CCCCCGTCAGTCACTCATA.................................................................................................................. 191.000.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................CCCGTCAGTCACTGGG................................................................................................................... 1630.670.67------------------------------------------------------0.67------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GGGAGTCCTTGTGCTCT........................................................................................................................................................................................ 1720.500.50---------------------------------------------------------------------------------------------------------------------------------------0.50---
..............................................................................................GTCTTCTTAGAGTGTCC................................................................................................................................................................................................................................................................................................... 1720.500.50-------------------------------------------------------------------------------------------------------------------------------------0.50-----
..............................................................................................................................................................................................................................................................................................................................................................................TATCCTGCCCACCG...................... 1430.330.33----------------------------------0.33--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................CCGGCGTATAGT............. 1230.330.33----------------------------------0.33--------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTTATTCTTCATCCTCCT................................................................................................................................................................................................................................................... 18100.200.20------------------------------------0.10-----------------------------------------------------------------------------------------------------0.10
.............................................................................................................................................CTTATTCTTCATCCTCCTC.................................................................................................................................................................................................................................................. 19100.100.10-------------------------------------------------------------------------------0.10-----------------------------------------------------------
..............................................................................................................................................................................................................................................................................CCCCGTCAGTCACT...................................................................................................................... 14100.100.10-----------------------------------0.10-------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTTATTCTTCATCCTCCTCTCGC.............................................................................................................................................................................................................................................. 230.100.00-------------------0.10-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTTATTCTTCATCCTCCTCTGGT.............................................................................................................................................................................................................................................. 230.100.00-------------------------------------------------------0.10-----------------------------------------------------------------------------------