ID: mmu-mir-6898
GENE: 4632411B12Rik(12)
chr1:36405477-36405712-


(1)
AGO.mut 		(2)
AGO1.ip 		(13)
AGO2.ip 		(2)
AGO3.ip 		(7)
B-CELL 		(14)
BRAIN 		(11)
CELL-LINE 		(1)
DCR.mut 		(8)
EMBRYO 		(8)
ESC 		(7)
FIBROBLAST 		(6)
LIVER 		(3)
LYMPH 		(8)
OTHER 		(3)
OTHER.mut 		(2)
PANCREAS 		(4)
PIWI.ip 		(2)
PIWI.mut 		(5)
SKIN 		(7)
SPLEEN 		(17)
TESTES 		(4)
THYMUS 		(2)
UTERUS

Sense strand
GTCCTGCTTCCCCAGCTGCCAGGCTCCCCACATCCCCCTCAGGCTCAGAGGTAGTGTGTGCAGGGAGAGGCGCCTTTACTGAGGTCTTCCTTTGTGGGAATGTCTGGGAATCCCTGTAAGGGGAGATGCAGGGAGCCATGCCGAATGATGCTTGGATTCAAGTCTCTTTGTACCTTCTCTACCCAGGATCTCTCCAGTGTGTCCAGCAGCCCCACCTCTAGCCCTAAGACCAAAGT
.................................................................................................................(((..(((((((.(((((((((.(((.....)))..(((((....)))))))))))))).)))))))...)))..................................................
.............................................................................................................110.........................................................................186................................................
SizePerfect hitTotal NormPerfect NormSRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037935(GSM510473)
293cand3. (cell line)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
..................................................................................................................TGTAAGGGGAGATGCAGGGAGC....................................................................................................22165.0065.0012.002.001.00-2.00-1.00-2.00-6.00-1.003.003.001.002.001.004.002.001.00-----2.001.001.00------2.00--1.00-----1.00----1.00-1.00---2.001.00--1.00-1.00-----------1.00-------------1.00------1.001.001.00--------1.00---
..................................................................................................................TGTAAGGGGAGATGCAGGGAG.....................................................................................................21134.0034.00--4.005.003.00-4.00-1.00----2.001.00-1.001.00----2.00----2.00-----1.00--------2.00------------------1.00----------------------1.00------------1.00--1.00-1.00------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCC...................................................................................................23121.0021.00---------6.00------------------2.002.00------1.00--------1.00----1.00-----1.00-------1.001.00--1.001.00------1.00----------------1.00---------1.00-----
..................................................................................................................TGTAAGGGGAGATGCAGGGAGT....................................................................................................22112.0034.00----1.00------------------3.00--------------------1.00-1.00-------2.00----1.00-------------------1.00-1.00--------1.00------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAA.....................................................................................................21110.003.008.00---------------1.00---------------------1.00----------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCA..................................................................................................2418.008.00--------1.00-------1.00---1.00--------------------1.00----------1.00---------1.00--------1.00------1.00------------------------------
...................................................................................................................GTAAGGGGAGATGCAGGGAGCC...................................................................................................2216.006.00--6.00----------------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCAT.................................................................................................2515.005.00-1.00-----------------1.00-1.00------------2.00--------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGA....................................................................................................2214.0034.00------1.00---------------1.00-1.00-----1.00------------------------------------------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCATTAT..............................................................................................2513.002.00---3.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................AGTCTCTTTGTACCTTCTCTAC......................................................2213.003.00-2.00----------1.00------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGA......................................................................................................2013.003.00-------------------1.00--------------------------------------1.00---------------1.00----------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCAAA................................................................................................2613.008.00-----------1.00---------1.00----------------------------------------------------------------------------1.00----------
.....................................................................................................................................................GCTTGGATTCAAGTCTCTTTGTACCTTC...........................................................2812.002.00-----------------------------------------2.00-------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCAAT.................................................................................................2512.0065.00-------------------------------1.00-------------------------------1.00---------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCATT................................................................................................2312.002.00-----------1.00--------------------------------------1.00----------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGG........................................................................................................1812.002.00--------------------------------------1.00--------------------------------------------------------------1.00-------
....................................................................................................................TAAGGGGAGATGCAGGGAGCCAAT................................................................................................2412.001.00------------1.00--1.00---------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGTT...................................................................................................2312.0034.00------------------------1.00------1.00-----------------------------------------------------------------------------
..................................................................................................................................................................TCTCTTTGTACCTTCTCTACC.....................................................2112.002.00-1.00----------------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................TCCAGTGTGTCCAGCAGCCCCACCTC..................2612.002.00-----------------2.00-------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCT...................................................................................................2312.0065.00---------------1.00-------------------------------1.00-------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCTT..................................................................................................2412.0065.00---------------------1.00-----------------1.00---------------------------------------------------------------------
..................................................................................................................................................................TCTCTTTGTACCTTCTCTACCC....................................................2212.002.00-1.00---------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGATTT...................................................................................................2312.003.00--------------------2.00----------------------------------------------------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCAT.................................................................................................2212.002.00---------------------------------1.00-------------------------------------------------------1.00-------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAAA....................................................................................................2211.003.00---------------------------------------------------1.00---------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCGT.................................................................................................2511.0021.00--------1.00----------------------------------------------------------------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCATGT...............................................................................................2411.001.00----------------------------------------------------1.00--------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGAG.....................................................................................................1911.001.00------1.00------------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAT.....................................................................................................2111.003.00-----------------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................................AGTCTCTTTGTACCTTCTCTAT......................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................GTAAGGGGAGATGCAGGGAGC....................................................................................................2111.001.00--------------------------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................AAGTCTCTTTGTACCTTCTCT........................................................2111.001.00-------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGAT...................................................................................................2311.0034.00---------------------------------------1.00---------------------------------------------------------------------
..................................................GTAGTGTGTGCAGGGAGAGGCGCCTTTA..............................................................................................................................................................2811.001.00---------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAAACA..................................................................................................2411.003.00-----------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGCGC....................................................................................................221.000.001.00------------------------------------------------------------------------------------------------------------
...............................................................................................GGGAATGTCTGGGAAAC............................................................................................................................171.000.00------------------------------------1.00------------------------------------------------------------------------
................................................................................................................................................................AGTCTCTTTGTACCTTCTCTACC.....................................................2311.001.00-----------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCAA..................................................................................................2411.0065.00-------------------------------------1.00-----------------------------------------------------------------------
.TCCTGCTTCCCCAGCTGCCAGGC....................................................................................................................................................................................................................2311.001.00---------------------------------------------------------------------------------------------------1.00---------
..................................................GTAGTGTGTGCAGGGAGAA.......................................................................................................................................................................1911.001.00------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................GTAAGGGGAGATGCAGGGAGCCATG................................................................................................2511.001.00----------------------------------------------------------1.00--------------------------------------------------
...................................CCCTCAGGCTCAGAGCACA......................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------1.00-----------------
...............................................................................................................................................AATGATGCTTGGATTCGC...........................................................................181.000.00----------------------------------------------------------------------------------1.00--------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGTAA..................................................................................................2411.0034.00----------------------------------------1.00--------------------------------------------------------------------
..........................................................................................................................................TGCCGAATGATGCTTG..................................................................................1621.001.00-----------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCAATA...............................................................................................2711.008.00------------------------------------------1.00------------------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGCGCC...................................................................................................211.000.00-----------------------------------------------------1.00-------------------------------------------------------
.......................................................................................................................GGGGAGATGCAGGGAGCCA..................................................................................................1911.001.00----------------------------------------------------------------------------------------1.00--------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCATTTTA.............................................................................................2611.002.00---------------------------------------------------------------1.00---------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGAGCCATATTT.............................................................................................2711.001.00-----------------------1.00-------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGAA......................................................................................................2011.002.00----------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCTTAT................................................................................................2611.0065.00------------------------------------------------------------------------1.00------------------------------------
.............................................................................................................ATCCCTGTAAGGGGAGATGCAGGA.......................................................................................................241.000.00----------------------------------------------1.00--------------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGAGCCAT.................................................................................................2311.001.00-1.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCATGA...............................................................................................2411.001.00-------------------------------------1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................TCTAGCCCTAAGACCAAAGT2011.001.00--------------------------------------------------------------------------------1.00----------------------------
.........................................................................................CTTTGTGGGAATGTCTGA.................................................................................................................................181.000.00--------------------------------------------------------------------------------------------1.00----------------
....................................................................................................................TAAGGGGAGATGCAGGGAGT....................................................................................................2011.001.00---------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCAAA.................................................................................................2511.0065.00---------------------------------------------1.00---------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAAT....................................................................................................2211.003.00-----------------------------------------------------1.00-------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCT..................................................................................................2411.0021.00--------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGAGCCA..................................................................................................2211.001.00----1.00--------------------------------------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCATT.................................................................................................2511.0065.00---------------------------------------1.00---------------------------------------------------------------------
..................................................GTAGTGTGTGCAGGGAAAA.......................................................................................................................................................................191.000.00------------------------------1.00------------------------------------------------------------------------------
..................................................GTAGTGTGTGCAGGGAGAGGCGCCTTT...............................................................................................................................................................2711.001.00-----------------------------------------------------------------------------1.00-------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGATTAA..................................................................................................2411.003.00--------------------------------------------------------------1.00----------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCAAA................................................................................................231.000.00---------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCTA.................................................................................................2511.0021.00----------------------------------------1.00--------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCTT.................................................................................................2511.0021.00----------------------------------1.00--------------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCAGTT...............................................................................................2711.008.00--------------1.00----------------------------------------------------------------------------------------------
...................................................................................................................GTAAGGGGAGATGCAGGGAGCCATT................................................................................................251.000.00-----------------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCATG................................................................................................2311.001.00----------------------------------------------------------------1.00--------------------------------------------
.............................................................................................................ATCCCTGTAAGGGGAGA..............................................................................................................1711.001.00-------------------------------------------------------------------1.00-----------------------------------------
............................................................................................................................................................TTCAAGTCTCTTTGTTCGT.............................................................191.000.00------------------------1.00------------------------------------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGAGCCGAG................................................................................................241.000.00------------1.00------------------------------------------------------------------------------------------------
................................................................................GAGGTCTTCCTTTGTGGGAATGTCT...................................................................................................................................2511.001.00------------------------------1.00------------------------------------------------------------------------------
..................................................GTAGTGTGTGCAGGGAGA........................................................................................................................................................................1811.001.00-------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................AAGGGGAGATGCAGGGAGCCAATA...............................................................................................241.000.00-------------------------------------------------------------------------------------1.00-----------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGCCAGA................................................................................................2611.008.00-------------------------------1.00-----------------------------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGCGT....................................................................................................201.000.00---------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGAGCCTT.................................................................................................231.000.00----------------------------------------1.00--------------------------------------------------------------------
..................................................................................................................TGTAAGGGGAGATGCAGGGAGAGA..................................................................................................2411.0034.00-1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................TAAGGGGAGATGCAGGGAGC....................................................................................................2011.001.00---------------------------------------------------------------------------1.00---------------------------------
..................................................................................................................................................................TCTCTTTGTACCTTCTCTACCA....................................................2211.002.00-1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................GGGGAGATGCAGGGAGCC...................................................................................................1820.500.50---------------------------0.50---------------------------------------------------------------------------------
................................TCCCCCTCAGGCTCAGAG..........................................................................................................................................................................................1820.500.50--------------------------0.50----------------------------------------------------------------------------------

Antisense strand
GTCCTGCTTCCCCAGCTGCCAGGCTCCCCACATCCCCCTCAGGCTCAGAGGTAGTGTGTGCAGGGAGAGGCGCCTTTACTGAGGTCTTCCTTTGTGGGAATGTCTGGGAATCCCTGTAAGGGGAGATGCAGGGAGCCATGCCGAATGATGCTTGGATTCAAGTCTCTTTGTACCTTCTCTACCCAGGATCTCTCCAGTGTGTCCAGCAGCCCCACCTCTAGCCCTAAGACCAAAGT
.................................................................................................................(((..(((((((.(((((((((.(((.....)))..(((((....)))))))))))))).)))))))...)))..................................................
.............................................................................................................110.........................................................................186................................................
SizePerfect hitTotal NormPerfect NormSRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037935(GSM510473)
293cand3. (cell line)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
.................................................................................................................................................................................TCTACCCAGGATCTCAAA......................................... 186.000.00-----3.00--------------------------1.00---------------2.00------------------------------------------------------------
.................................................................................................................................................................................TCTACCCAGGATCTCAAAT........................................ 195.000.00-------5.00-----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TCTACCCAGGATCTCAAAA........................................ 194.000.00-------1.00------------------------2.00-----------------------------------------------------1.00----------------------
.................................................................................................................................................................................TCTACCCAGGATCTCAAGA........................................ 194.000.00-----4.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TTCTCTACCCAGGATCTCAA.......................................... 202.000.00-------------------------2.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................TCTACCCAGGATCTCAA.......................................... 172.000.00-----------------------------------1.00-------1.00-----------------------------------------------------------------
.................................................................................................................................................................................TCTACCCAGGATCTCATA......................................... 182.000.00---------------------------------------------------------2.00---------------------------------------------------
......................GCTCCCCACATCCCCCT..................................................................................................................................................................................................... 1731.331.33-------------------------0.67----------0.67------------------------------------------------------------------------
................................................................................................................................................................................CTCTACCCAGGATCTC............................................ 1641.251.25-------------------------------------------1.25-----------------------------------------------------------------
...........................CCACATCCCCCTCAGAGCT.............................................................................................................................................................................................. 191.000.00--------------------------------------------------------------------------------------------------------1.00----
.........................................................................................................................................................................................GGATCTCTCCAGTGTAAA................................. 181.000.00-------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................CGAATGATGCTTGGATTCAAGTCTCTT.................................................................... 2711.001.00------------------------------------------------------------1.00------------------------------------------------
....................................CCTCAGGCTCAGAGGTTTT..................................................................................................................................................................................... 191.000.00-------------------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................CAGCAGCCCCACCTCTTGT.............. 191.000.00-----------------------------------------------------------------------------------1.00-------------------------
.................................................................................................................................AGGGAGCCATGCCGAATGATGCTTGGA................................................................................ 2711.001.00------------------------------------------------------------1.00------------------------------------------------
.............................................................................................................................ATGCAGGGAGCCATGCCGAATGATGCT.................................................................................... 2711.001.00----------------------------------------------------------------------1.00--------------------------------------
..............................................................................................................................................................................................TCTCCAGTGTGTCCATGTA........................... 191.000.00------------------------------------------------------------------1.00------------------------------------------
......................GCTCCCCACATCCCCCTC.................................................................................................................................................................................................... 1830.330.33------------------------------------0.33------------------------------------------------------------------------
......CTTCCCCAGCTGCCAGG..................................................................................................................................................................................................................... 1730.330.33-----------------------------------------------------------------------------------------------------------0.33-
..............................................................................................................................................................................................TCTCCAGTGTGTCCAG.............................. 1660.330.33----------------------------------------------------------------------------------------------------------0.33--
..............................................................................................................................................................................................TCTCCAGTGTGTCCAGATCT.......................... 200.170.00------------------------------------------------------------------------------------------------------------0.17
.......................CTCCCCACATCCCCCTC.................................................................................................................................................................................................... 1760.170.17-------------------------0.17-----------------------------------------------------------------------------------