ID: mmu-mir-721
chr5:136851536-136851723 -
Display Libraries
(1)
AGO1.ip
(1)
BRAIN
(4)
CELL-LINE
(12)
EMBRYO
(5)
ESC
(1)
HEART
(3)
LIVER
(2)
OTHER
(2)
OTHER.mut
(2)
SKIN
(4)
TESTES
Showing top 25 reads
ATTTCCCTAGCCTGAAGACATGGAGGGCAGAGAGAGATTCAGGTTTCCTGGGAAGACAGTGCAATTAAAAGGGGGAAAAAAGTACCTGGGATGTTCTGAGAATTTCATTTTTCTTGTTATTGCCACTCCTGCTTGGAAGAACTATGTTCCCAAAATAGCTCTAGCAATCTAGCATAACATAAATATTT
............................................................(((((....(((..(((..((((..((.((.....)).)).))))..)))..)))...)))))...(((.....)))...................................................
..................................................51.....................................................................................138................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR073955(GSM629281)
total RNA. (blood)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
GSM416732(GSM416732)
MEF. (cell line)
........................................................CAGTGCAATTAAAAGGGcat................................................................................................................20CAT145.000.0036.0021.0024.0016.0012.009.006.002.004.003.00-1.001.002.00-2.002.00----1.00--1.001.00---1.00----
........................................................CAGTGCAATTAAAAGGGcata...............................................................................................................21CATA8.000.00-3.003.00---2.00---------------------------
........................................................CAGTGCAATTAAAAGGGca.................................................................................................................19CA5.000.00----1.00--3.00-------------------------1.00
........................................................CAGTGCAATTAAAAGGGcatt...............................................................................................................21CATT5.000.00---1.001.00----1.00----------1.00----------1.00--
.........................................................AGTGCAATTAAAAGGG...................................................................................................................1623.003.00----------3.00-----------------------
........................................................CAGTGCAATTAAAAGGGcaaa...............................................................................................................21CAAA2.000.00-2.00--------------------------------
..............................................................................................TCTGAGAATTTCATTaaa............................................................................18AAA2.000.00------1.00-----1.00---------------------
.........................................................................................................................................................................TAGCATAACATAAATATTgtca22GTCA1.000.00------------------------------1.00---
.........................................................................................................................................................................TAGCATAACATAAATATTggca22GGCA1.000.00-----------1.00----------------------
.........................................................................................................................................................................TAGCATAACATAAATATTatca22ATCA1.000.00-----------------------1.00----------
.........................................................................................................................................................................TAGCATAACATAAATATTTgcg22GCG1.000.00--------------1.00-------------------
.........................................................................................................................................................................TAGCATAACATAAATATTcgag22CGAG1.000.00--------------1.00-------------------
.........................................................................................................................................................................TAGCATAACATAAATATTgtcg22GTCG1.000.00------------------1.00---------------
.........................................................AGTGCAATTAAAAGGGcat................................................................................................................19CAT1.003.000.50--0.50------------------------------
.........................................................................................................................................................................TAGCATAACATAAATATTggcg22GGCG1.000.00---------------------------1.00------
............TGAAGACATGGAGGGCAGAGAGA.........................................................................................................................................................2311.001.00-1.00--------------------------------
......................................................................................TGGGATGTTCTGAGAATTTCATT...............................................................................2311.001.00--------------------------------1.00-
.......................AGGGCAGAGAGAGATca....................................................................................................................................................17CA1.000.00----------------------1.00-----------
......................GAGGGCAGAGAGAGAgcgg...................................................................................................................................................19GCGG1.000.00--------------------------1.00-------
.........................................................................................................................................................................TAGCATAACATAAATATTgg20GG1.000.00-------------------1.00--------------
........................................................CAGTGCAATTAAAAGGGa..................................................................................................................18A1.000.00-----------------1.00----------------
.........................................................AGTGCAATTAAAAGGGcatt...............................................................................................................20CATT0.503.00----0.50-----------------------------
........................................................CAGTGCAATTAAAAGGtca.................................................................................................................19TCA0.330.33------------------0.33---------------
........................................................CAGTGCAATTAAAAGG....................................................................................................................1630.330.33-----------------0.33----------------
........................................................CAGTGCAATTAAAAGGtcat................................................................................................................20TCAT0.330.330.33---------------------------------
ATTTCCCTAGCCTGAAGACATGGAGGGCAGAGAGAGATTCAGGTTTCCTGGGAAGACAGTGCAATTAAAAGGGGGAAAAAAGTACCTGGGATGTTCTGAGAATTTCATTTTTCTTGTTATTGCCACTCCTGCTTGGAAGAACTATGTTCCCAAAATAGCTCTAGCAATCTAGCATAACATAAATATTT
............................................................(((((....(((..(((..((((..((.((.....)).)).))))..)))..)))...)))))...(((.....)))...................................................
..................................................51.....................................................................................138................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR073955(GSM629281)
total RNA. (blood)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
GSM416732(GSM416732)
MEF. (cell line)
.....................................................................................................................................................atgAAATAGCTCTAGCAAT.................... 19atg1.000.00----------------------------1.00-----