ID: mmu-mir-694
chr18:66378868-66379037 -
Display Libraries
(6)
AGO2.ip
(21)
BRAIN
(4)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(17)
EMBRYO
(3)
ESC
(8)
FIBROBLAST
(1)
HEART
(10)
LIVER
(4)
OTHER
(12)
OTHER.mut
(2)
PANCREAS
(3)
PIWI.ip
(23)
TESTES
(2)
TOTAL-RNA
Showing top 47 reads
AGCTGTTGTAAGGTAAGAGCTCCCGGCGGCAAAGCTGCCAACTGGGAGTCAAAGGCCAGCTCAGGCATCGCTTTCAACCCAAGACCAGGCTGAAAATGTTGCCTGAAGCAGTCTCTGCCTTCTGCTTTCATCACAAATACCCGACCCCCACTGCACCCCCTGCCCTGTGA
..................................................((((..(((((((((.((.(((((.((........)).))))).)).))))))).)).))))........................................................
....................................................53.................................................................120................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO2()
Liver Data. (Zcchc11 liver)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
mjTestesWT3()
Testes Data. (testes)
mjLiverWT1()
Liver Data. (liver)
mjLiverWT2()
Liver Data. (liver)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
mjLiverWT3()
Liver Data. (liver)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
mjTestesWT2()
Testes Data. (testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
GSM416732(GSM416732)
MEF. (cell line)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
GSM510444(GSM510444)
brain_rep5. (brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR206942(GSM723283)
other. (brain)
SRR037919(GSM510457)
e12p5_rep1. (embryo)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR037927(GSM510465)
e7p5_rep1. (embryo)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR037922(GSM510460)
e12p5_rep4. (embryo)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR037938(GSM510476)
293Red. (cell line)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR206941(GSM723282)
other. (brain)
.........................................................................................CTGAAAATGTTGCCTGAAGCAGT..........................................................231273.00273.0027.00-15.0021.006.0014.005.0010.0014.00-10.0010.0011.007.005.008.002.005.005.005.006.005.00-1.005.004.004.002.00-3.004.004.004.002.001.002.00-2.001.002.00-1.00-2.002.00-1.001.001.002.001.001.002.001.002.002.002.002.00-2.00-1.001.00--1.001.001.001.001.001.00-1.00---1.00-1.001.00--1.00---1.00----1.00--1.00
.........................................................................................CTGAAAATGTTGCCTGAAGCAG...........................................................22179.0079.003.0031.007.001.0013.00-1.00---1.001.00----3.00------4.00--1.002.00-1.00----2.00------1.00-----1.001.00----1.00-----------------------------1.001.00---1.00----1.00-
.........AAGGTAAGAGCTCCCaat...............................................................................................................................................18AAT13.000.00---------13.00-------------------------------------------------------------------------------------
..........................................................................................TGAAAATGTTGCCTGAAGCAGT..........................................................22112.0012.00-------1.00-----1.00-----1.00--6.001.001.00-----------------------------------1.00----------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGC.............................................................2016.006.00--1.00-----------2.00-1.00--------2.00---------------------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGCA............................................................2115.005.00-----------1.00---------------------------------2.001.00----1.00-------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGCAGTa.........................................................24A4.00273.001.00-----------1.00---1.00--------------------------------------------------------------------1.00---------
.........................................................................................CTGAAAATGTTGCCTGAAG..............................................................1914.004.00--------------1.00------------1.00-----------------------------------1.00--------------------------1.00----
.........................................................AGCTCAGGCATCGCTTTCAACC...........................................................................................2213.003.00----------------------------2.00-----------------------------1.00------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGCAGTt.........................................................24T2.00273.00----------2.00------------------------------------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGCAtt..........................................................23TT2.005.00-----------------1.00---1.00-------------------------------------------------------------------------
........................................................................................GCTGAAAATGTTGCCTGAAGCAGT..........................................................2412.002.001.00----------------------------------------------------------------------------1.00-----------------
........................................................................................GCTGAAAATGTTGCCTGAAGCAG...........................................................2312.002.001.00---------------------------------------------------------1.00------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGCAGa..........................................................23A2.0079.00-----1.00-------1.00---------------------------------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGaagt..........................................................23AAGT2.004.00-------2.00---------------------------------------------------------------------------------------
..........................................................................................TGAAAATGTTGCCTGAAGCAG...........................................................2112.002.00----------------------------2.00------------------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGCAGc..........................................................23C1.0079.00-------------------------------------1.00---------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAg...............................................................18G1.000.00-----------1.00-----------------------------------------------------------------------------------
...................................................AAGGCCAGCTCAGGCAcgca...................................................................................................20CGCA1.000.00-----------------------------------------------------------------------1.00-----------------------
.........................................................................................CTGAAAATGTTGCCTGAAGaag...........................................................22AAG1.004.00-1.00---------------------------------------------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGgagt..........................................................23GAGT1.004.00---------------------------------1.00-------------------------------------------------------------
........................GGCGGCAAAGCTGCCAc.................................................................................................................................17C1.000.00--------------------------------------------------------------------------------1.00--------------
.........................................................................................CTGAAAATGTTGCCTGAAGCAt...........................................................22T1.005.00---------------------------------------------------------------------------------------1.00-------
..................................................AAAGGCCAGCTCAGGgtga.....................................................................................................19GTGA1.000.00----------------------------------------------------------------1.00------------------------------
..........................................................................................TGAAAATGTTGCCTGAAGCAGTt.........................................................23T1.0012.001.00----------------------------------------------------------------------------------------------
.........................................................AGCTCAGGCATCGCTTTCAA.............................................................................................2011.001.00--------------------------------------1.00--------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAccag...........................................................22CCAG1.000.00-1.00---------------------------------------------------------------------------------------------
......................................................................................AGGCTGAAAATGTTGCCTGAAGCAGTCTCTG.....................................................3111.001.00-----------------------------------1.00-----------------------------------------------------------
.........................................................................................CTGAAAATGTTGCCTGAAGCAct..........................................................23CT1.005.00-------1.00---------------------------------------------------------------------------------------
.........................................................AGCTCAGGCATCGCTTTC...............................................................................................1811.001.00------------------------------------------1.00----------------------------------------------------
........................................................................................GCTGAAAATGTTGCCTGAAGC.............................................................2111.001.00------------------1.00----------------------------------------------------------------------------
AGCTGTTGTAAGGTAAGAGCTCCCGGCGGCAAAGCTGCCAACTGGGAGTCAAAGGCCAGCTCAGGCATCGCTTTCAACCCAAGACCAGGCTGAAAATGTTGCCTGAAGCAGTCTCTGCCTTCTGCTTTCATCACAAATACCCGACCCCCACTGCACCCCCTGCCCTGTGA
..................................................((((..(((((((((.((.(((((.((........)).))))).)).))))))).)).))))........................................................
....................................................53.................................................................120................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO2()
Liver Data. (Zcchc11 liver)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
mjTestesWT3()
Testes Data. (testes)
mjLiverWT1()
Liver Data. (liver)
mjLiverWT2()
Liver Data. (liver)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
mjLiverWT3()
Liver Data. (liver)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
mjTestesWT2()
Testes Data. (testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
GSM416732(GSM416732)
MEF. (cell line)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
GSM510444(GSM510444)
brain_rep5. (brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR206942(GSM723283)
other. (brain)
SRR037919(GSM510457)
e12p5_rep1. (embryo)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR037927(GSM510465)
e7p5_rep1. (embryo)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR037922(GSM510460)
e12p5_rep4. (embryo)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR037938(GSM510476)
293Red. (cell line)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR206941(GSM723282)
other. (brain)
.........................................................................................................accgAGTCTCTGCCTTCTGCT............................................ 21accg5.000.00------4.00-----------------------------------1.00----------------------------------------------------
.........................................................................................................tccgAGTCTCTGCCTTCTGCT............................................ 21tccg4.000.00------2.00-----------------------------1.00-------------------------------------------------------1.00--
..........................................................................................................tcgAGTCTCTGCCTTCTGCT............................................ 20tcg2.000.00------------------------------------1.00----------------------------------------------------1.00-----
.........................................................................................................tccgAGTCTCTGCCTTCTGC............................................. 20tccg2.000.00----------------------------------------1.00--------------------------------1.00---------------------
........................................cgctGGAGTCAAAGGCCAG............................................................................................................... 19cgct2.000.00---------------------------------1.00------1.00------------------------------------------------------
.........................................................................................................ccagAGTCTCTGCCTTCTGCT............................................ 21ccag1.000.00---------------------------------------1.00-------------------------------------------------------
.........................................................................................................accgAGTCTCTGCCTTCTGCTT........................................... 22accg1.000.00------1.00----------------------------------------------------------------------------------------
....................................................................................................................................................aACTGCACCCCCTGCCCTGTGA 22a1.000.00---------------------------------------------------------------------------------1.00-------------
.........................................................................................................ttcgAGTCTCTGCCTTCTGC............................................. 20ttcg1.000.00----------------------------------------1.00------------------------------------------------------
..............................................................................................................................................agagCCCACTGCACCCCCT......... 19agag1.000.00--------------------------------------------------1.00--------------------------------------------
...............................................................................................cgGTTGCCTGAAGCAGTCT........................................................ 19cg1.000.00---------------------------------------------------------------------------1.00-------------------
..........................................................................................................acgAGTCTCTGCCTTCTGC............................................. 19acg1.000.00-----------------1.00-----------------------------------------------------------------------------
.........................................................................................................cctgAGTCTCTGCCTTCTGCT............................................ 21cctg1.000.00------1.00----------------------------------------------------------------------------------------
..........................................................................................................acgAGTCTCTGCCTTCTGCT............................................ 20acg1.000.00------1.00----------------------------------------------------------------------------------------
..........................................................................................................atgAGTCTCTGCCTTCTGCT............................................ 20atg1.000.00------------------------------------1.00----------------------------------------------------------
.....................................................................................................................................................caaGCACCCCCTGCCCTGTGA 21caa1.000.00--------------------------------------------------------------------------1.00--------------------