ID: mmu-mir-690
chr16:28599971-28600179 -
Display Libraries
(9)
B-CELL
(10)
BRAIN
(4)
CELL-LINE
(12)
EMBRYO
(9)
ESC
(2)
FIBROBLAST
(1)
LIVER
(5)
LYMPH
(8)
OTHER
(2)
OTHER.mut
(2)
PIWI.ip
(1)
PIWI.mut
(6)
SPLEEN
(12)
TESTES
(1)
THYMUS
(3)
TOTAL-RNA
Showing top 216 reads
TCTTAACCTGAAGGCCACGTTGATTCTTCTGTGTTTCTTTTGTTTTGTTTTGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATAAGAACCACTCTTCTCCTAAGAGGATGTTAATACGTTTCTTCAATGACCTG
...............................................................................................................(((......(((..((((......))))..))).....))).........................................................
..........................................................................................................107.................................................159................................................
SizePerfect hitTotal NormPerfect NormSRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR037937(GSM510475)
293cand2. (cell line)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR073955(GSM629281)
total RNA. (blood)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR206939(GSM723280)
other. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR060845(GSM561991)
total RNA. (brain)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
GSM566422(GSM566422)
Endougenous small RNA from MHV-68 infected mouse S11 cell, treated with TPA. (B cell)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
mjTestesWT2()
Testes Data. (testes)
GSM416732(GSM416732)
MEF. (cell line)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR059773(GSM562835)
CD4_Dicer. (spleen)
SRR206942(GSM723283)
other. (brain)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
...................................................................................................................................TAAAGGCTAGGCTCACAAga..........................................................20GA19.000.009.001.003.002.00-1.001.00-2.00-------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCAaaaa...........................................................19AAAA15.000.002.00-2.004.00-1.003.00-2.00-1.00-----------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAccc..........................................................22CCC8.000.00-----------8.00----------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAccat....................................................25CCAT7.000.00----6.00---------------------1.00-------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCAaga............................................................19AGA6.000.001.00-3.001.00-1.00----------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAcca.....................................................24CCA6.000.00----5.00-----1.00-----------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAag.............................................................19AG5.000.001.003.00------------------------------------1.00-------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAaga............................................................20AGA5.000.00---------2.00------------------------1.00---------------------1.00------------1.00------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAcag....................................................25CAG5.000.00-5.00--------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAaaga........................................................22AAGA5.000.001.001.00-1.00--1.00-1.00-------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAAag..........................................................21AG5.000.00--2.001.00-----------2.00------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACaga........................................................22AGA5.000.002.00-1.002.00------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAaag............................................................20AAG4.000.00---------1.00--2.00---1.00-----------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAga..........................................................19GA4.000.00-1.00---1.001.00-1.00-------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACagaa.......................................................23AGAA4.000.003.00-1.00-------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAaga.........................................................21AGA4.000.001.00-1.001.00-1.00----------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCAgaaa...........................................................19GAAA4.000.003.00-1.00-------------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAtat......................................................23TAT3.000.00-----2.00-----------------------------------------------------------------1.00----------
..................................................................................................................................TTAAAGGCTAGGCTCACAAgaa.........................................................22GAA3.000.001.00-1.00-----1.00-------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAccaa.....................................................25CCAA3.000.00----3.00-----------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAagaa........................................................21AGAA3.000.00--2.00--1.00----------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAaaat........................................................21AAAT3.000.00--2.00--1.00----------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCAagaa...........................................................20AGAA3.000.002.00-1.00-------------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCAaaaa...........................................................20AAAA3.000.00--1.001.00--------------------------------------------------------1.00---------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAttt............................................................20TTT3.000.00------------2.00------------1.00--------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAgaaa........................................................22GAAA3.000.00--1.001.00------1.00-----------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAACtttt.......................................................24TTTT3.000.00---------3.00------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAACg..........................................................22G3.000.00---------2.00----1.00-------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAgaaa........................................................21GAAA3.000.001.00-1.00--------------------------------------------1.00----------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAAatcg..................................................27ATCG2.000.00--------2.00-------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAtt.............................................................19TT2.000.00-----------------1.00---------------------------------------------------------1.00------
......................................................................................................................................AGGCTAGGCTCACAACacca.......................................................20ACCA2.000.00----2.00-----------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCttt.............................................................19TTT2.000.00---------2.00------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTaaga.............................................................19AAGA2.000.001.00--------------1.00------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCcaat......................................................23CAAT2.000.00--1.00-----1.00-------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAtag....................................................25TAG2.000.00-2.00--------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAACCAtt.......................................................25TT2.000.00-----------1.00---------------1.00------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAcat.....................................................25CAT2.000.00-2.00--------------------------------------------------------------------------------
................................................................................................................................................CACAACCAAAATATAAGAgt.............................................20GT2.000.00---------------------------------------1.00--1.00---------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAcc...........................................................21CC2.000.00-------------------------------------------------1.00------------------------1.00-------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAtag.....................................................25TAG2.000.00-2.00--------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACttt...........................................................21TTT2.000.00--------------2.00-------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCAag.............................................................17AG2.000.00------------2.00---------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAcct....................................................25CCT2.000.00-----2.00----------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAcact....................................................25CACT2.000.00----1.00----------------1.00------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACctcc..........................................................19CTCC2.000.00-2.00--------------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAcac....................................................25CAC2.000.00-2.00--------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTaaa..............................................................18AAA2.000.00-1.00-----------1.00--------------------------------------------------------------------
.........................................................................................................TCCAGCTGGAGAGATaccc.....................................................................................19ACCC2.000.00--------------2.00-------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACcact..........................................................22CACT2.000.00-------------------------------2.00--------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAaag.........................................................20AAG2.000.00------------------------2.00---------------------------------------------------------
.......................................................................................................................................GGCTAGGCTCACAACCAcaca.....................................................21CACA2.000.00----------------------2.00-----------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAgaag........................................................22GAAG2.000.001.00--1.00------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAAgaa.........................................................23GAA2.000.00---1.00----------------------------------------------------------------1.00-------------
...................................................................................................................................TAAAGGCTAGGCTCACAAagg.........................................................21AGG2.000.00------------2.00---------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAgag....................................................25GAG2.000.00-2.00--------------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAgaa.........................................................20GAA2.000.00------1.00------1.00--------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAgaa.........................................................21GAA2.000.001.00-1.00-------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAgac.....................................................25GAC1.000.00-1.00--------------------------------------------------------------------------------
...........................................................................................................................................AGGCTCACAACCAAAggct...................................................19GGCT1.000.00--1.00-------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAaag.........................................................21AAG1.000.00----1.00-----------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACtta...........................................................20TTA1.000.00------1.00---------------------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAAaaga........................................................19AAGA1.000.00---1.00------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACctat..........................................................20CTAT1.000.00------------------------------------------------------1.00---------------------------
.....................................................................................................................................AAGGCTAGGCTCACAAga..........................................................18GA1.000.00-----1.00----------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAAag..........................................................22AG1.000.00---------------------------------------------------1.00------------------------------
.....................................................................................................................................AAGGCTAGGCTCACAACCAAAttt....................................................24TTT1.000.00-----------------------------------------1.00----------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCAaga............................................................18AGA1.000.00------1.00---------------------------------------------------------------------------
.....................................................................................................................................AAGGCTAGGCTCACAAaaat........................................................20AAAT1.000.00----------------------------------------------------------------------1.00-----------
.................................................................................................................................GTTAAAGGCTAGGCTCACAACCAtat......................................................26TAT1.000.00---------1.00------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTaga..............................................................18AGA1.000.00-----------------1.00----------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAACCAccc......................................................21CCC1.000.00----------1.00-----------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCgc..............................................................18GC1.000.00-------------------------------------------1.00--------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTaaaa.............................................................19AAAA1.000.00---------------------------------------------------------------1.00------------------
...................................................................................................................................TAAAGGCTAGGCTCACgcaa..........................................................20GCAA1.000.00----------1.00-----------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACgaa...........................................................19GAA1.000.00--------1.00-------------------------------------------------------------------------
.........................................................................................................................................CTAGGCTCACAACCAccac.....................................................19CCAC1.000.00-----------------------------1.00----------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAAaaga........................................................23AAGA1.000.00---1.00------------------------------------------------------------------------------
.......................................................................................................................................GGCTAGGCTCACAACtttt.......................................................19TTTT1.000.00--------------------1.00-------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCAata............................................................19ATA1.000.00-1.00--------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTagaa.............................................................19AGAA1.000.00------------1.00---------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAaaaa...........................................................21AAAA1.000.00------------1.00---------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAccta....................................................25CCTA1.000.00----------1.00-----------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAcgg..........................................................22CGG1.000.00-------------------------------------------------------------1.00--------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAACCAtg.......................................................24TG1.000.001.00---------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCAagga...........................................................19AGGA1.000.001.00---------------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCtaca............................................................19TACA1.000.00------1.00---------------------------------------------------------------------------
.........................................................................................................................................CTAGGCTCACAACCAAggg.....................................................19GGG1.000.00-----------------------------1.00----------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAgcc............................................................20GCC1.000.00------------------1.00---------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACtagt.......................................................23TAGT1.000.001.00---------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACcccc..........................................................22CCCC1.000.00----------------------------------------------------------------1.00-----------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAActc....................................................25CTC1.000.00----------1.00-----------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAAcct....................................................26CCT1.000.00-1.00--------------------------------------------------------------------------------
..................................................TGTGTTTTTGTGGAGCTAATTGGCTG.....................................................................................................................................2611.001.00-----------------------------------------------------------------1.00----------------
.................................................................................................................................GTTAAAGGCTAGGCTCAagt............................................................20AGT1.000.00--------------------1.00-------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAagaa...........................................................21AGAA1.000.00------------------1.00---------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACcgcc..........................................................19CGCC1.000.00---------------------------------------------------------1.00------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAcaaa....................................................25CAAA1.000.001.00---------------------------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAAgaa.........................................................18GAA1.000.00------1.00---------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAgaga........................................................22GAGA1.000.001.00---------------------------------------------------------------------------------
...........................................................................................................................................AGGCTCACAACCAAAAggct..................................................20GGCT1.000.00------------------1.00---------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAgag.....................................................25GAG1.000.00-1.00--------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTtta..............................................................18TTA1.000.00-------------------1.00--------------------------------------------------------------
.....................................................................................................................................AAGGCTAGGCTCACAAgaa.........................................................19GAA1.000.001.00---------------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAtaa....................................................25TAA1.000.00-1.00--------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCgtag......................................................24GTAG1.000.00----1.00-----------------------------------------------------------------------------
...........................................................................................................CAGCTGGAGAGATGGCTCAaga................................................................................22AGA1.000.00-----------------------------------------------------------1.00----------------------
.................................................................................................................................GTTAAAGGCTAGGCTCccca............................................................20CCCA1.000.00---------------------------1.00------------------------------------------------------
.....................................................................................................................................AAGGCTAGGCTCACAACCAAAAacac..................................................26ACAC1.000.00-1.00--------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAttt.........................................................21TTT1.000.00-------------1.00--------------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAAga..........................................................17GA1.000.00-----------------1.00----------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAtc.......................................................22TC1.000.00-----1.00----------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAaat.........................................................21AAT1.000.00-1.00--------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAtac.....................................................25TAC1.000.00-1.00--------------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAACCAgata.....................................................26GATA1.000.00-1.00--------------------------------------------------------------------------------
.........................................................................................................................................CTAGGCTCACAACCAAAcct....................................................20CCT1.000.00-----------1.00----------------------------------------------------------------------
..........................................TTTTGTTTTGTGTTTTTGggg..................................................................................................................................................21GGG1.000.00---------------------1.00------------------------------------------------------------
........................................................................................................................GGCTCAGCTGTTAAAGGCTAGGCcca...............................................................26CCA1.000.00-------1.00--------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCActta.....................................................25CTTA1.000.00----------1.00-----------------------------------------------------------------------
................................................................................................................GGAGAGATGGCTCAGCTGTTAAAGGCTAGGa..................................................................31A1.000.00-------------------------------------------------------------------------1.00--------
........................................................................................................................................GCTAGGCTCACAACCAttaa.....................................................20TTAA1.000.00-------------------------------------------------------1.00--------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAtaat.....................................................24TAAT1.000.00------1.00---------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAcat.....................................................24CAT1.000.00-1.00--------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACgaga.......................................................23GAGA1.000.001.00---------------------------------------------------------------------------------
........................................................................................................................................GCTAGGCTCACAACCAcc.......................................................18CC1.000.00----------------------------------------------1.00-----------------------------------
......................................................................................................................................AGGCTAGGCTCACAACCAgag......................................................21GAG1.000.00------1.00---------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAAAagac..................................................28AGAC1.000.00----------1.00-----------------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAAag..........................................................17AG1.000.00------------------------------------------------------------------1.00---------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAAtc.....................................................25TC1.000.00----------1.00-----------------------------------------------------------------------
.............................................................................................................................................................TAAGAACCACTCTTCactc.................................19ACTC1.000.00------------------------------1.00---------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAACCAgaag.....................................................22GAAG1.000.00---------1.00------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAta...........................................................18TA1.000.00-------------------------1.00--------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAAaag.........................................................22AAG1.000.001.00---------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAagaa........................................................22AGAA1.000.00--------1.00-------------------------------------------------------------------------
........................................................................................................CTCCAGCTGGAGAGATGGCTCAGag................................................................................25AG1.000.00--------------------------1.00-------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAgat.....................................................24GAT1.000.00-----1.00----------------------------------------------------------------------------
...........................................................................................................................................AGGCTCACAACCAAAAagcg..................................................20AGCG1.000.001.00---------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAat.............................................................19AT1.000.00-----------------------------------1.00----------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACttct.......................................................22TTCT1.000.00---------------1.00------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCgaa.............................................................19GAA1.000.00-------------1.00--------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAgg......................................................23GG1.000.001.00---------------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAtttt.........................................................22TTTT1.000.00------------------------------------------------------------------------1.00---------
.................................................................................................................................GTTAAAGGCTAGGCTCACAta...........................................................21TA1.000.00--------------------------------1.00-------------------------------------------------
........................................................................................................................................GCTAGGCTCACAACCAcca......................................................19CCA1.000.00----------------------1.00-----------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAag..........................................................20AG1.000.00----------------1.00-----------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAAtgga........................................................22TGGA1.000.00--1.00-------------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAgt.......................................................22GT1.000.001.00---------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACcact..........................................................20CACT1.000.00-------------------------------------------------------------------1.00--------------
....................................................................................................................................AAAGGCTAGGCTCACAACCgtag......................................................23GTAG1.000.00----------1.00-----------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACgaag..........................................................19GAAG1.000.00-1.00--------------------------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAACCAgt.......................................................20GT1.000.00---------1.00------------------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAAtttt........................................................19TTTT1.000.00--------------------------------------------------------------1.00-------------------
....................................................................................................................................AAAGGCTAGGCTCACAgg...........................................................18GG1.000.00--------1.00-------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAtctc........................................................21TCTC1.000.00---1.00------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACCAAgat.....................................................25GAT1.000.00-1.00--------------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACgaga..........................................................19GAGA1.000.00----------1.00-----------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAAttt.........................................................23TTT1.000.00---------------------------------------------1.00------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAtaaa...................................................26TAAA1.000.00----------------------------------------------------1.00-----------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAAgaag........................................................23GAAG1.000.00------1.00---------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCcaa.............................................................19CAA1.000.00-------------------------------------1.00--------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAAgagt....................................................25GAGT1.000.001.00---------------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAAgaaa........................................................23GAAA1.000.001.00---------------------------------------------------------------------------------
...............................................................................TAAAGTGCTAGTAAGAAACA..............................................................................................................2011.001.00-------1.00--------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCAaaca...........................................................20AACA1.000.00--------1.00-------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAACag.........................................................21AG1.000.00-----1.00----------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACggcc..........................................................19GGCC1.000.00-1.00--------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAttc............................................................20TTC1.000.00-------------------1.00--------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAAaga.........................................................22AGA1.000.00--------------------1.00-------------------------------------------------------------
.........................................................................................................................................CTAGGCTCACAACCAtatt.....................................................19TATT1.000.00---------1.00------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAACga.........................................................23GA1.000.00---1.00------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCgaga............................................................20GAGA1.000.00-------------1.00--------------------------------------------------------------------
......................................................................................................................................AGGCTAGGCTCACAACCgaag......................................................21GAAG1.000.00-----1.00----------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAAga..........................................................21GA1.000.00------------------------------------1.00---------------------------------------------
..........................................................................................................................................TAGGCTCACAACCAAAtaaa...................................................20TAAA1.000.00----1.00-----------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAACCAAgtag....................................................27GTAG1.000.00-1.00--------------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACagt........................................................21AGT1.000.00--------1.00-------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAcc.......................................................22CC1.000.00-1.00--------------------------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCAgaag...........................................................19GAAG1.000.00---1.00------------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCgtaa............................................................19GTAA1.000.00-1.00--------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCg...............................................................17G1.000.00-----------------------1.00----------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAaga.........................................................20AGA1.000.00------1.00---------------------------------------------------------------------------
..................................................................................................................................TTAAAGGCTAGGCTCACAACaga........................................................23AGA1.000.001.00---------------------------------------------------------------------------------
........................................................................................................................................GCTAGGCTCACAACCAAAcaat...................................................22CAAT1.000.00------------------------------------------------1.00---------------------------------
...................................................................................................................................TAAAGGCTAGGCTCACAgaag.........................................................21GAAG1.000.00-----1.00----------------------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAcaca.....................................................24CACA1.000.00-1.00--------------------------------------------------------------------------------
.....................................................................................................................................AAGGCTAGGCTCACAACgg.........................................................19GG1.000.00----------------------------1.00-----------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAAaat.........................................................20AAT1.000.00------1.00---------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAAatt.........................................................23ATT1.000.00----------------1.00-----------------------------------------------------------------
...................................................................................................................................TAAAGGCTAGGCTCAagaa...........................................................19AGAA1.000.001.00---------------------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCAgaaa...........................................................21GAAA1.000.00-------------------1.00--------------------------------------------------------------
....................................................................................................................................AAAGGCTAGGCTCACAACCAActc.....................................................24CTC1.000.00----------1.00-----------------------------------------------------------------------
.................................................................................................................................GTTAAAGGCTAGGCTCACAttct.........................................................23TTCT1.000.00----------------------------------------------------------1.00-----------------------
...........................................TTTGTTTTGTGTTTTTGTGttat...............................................................................................................................................23TTAT1.000.00---------------------1.00------------------------------------------------------------
............................................................................................................AGCTGGAGAGATGGCgttt..................................................................................19GTTT0.500.00-----------------------------------------------------------------------------0.50----
.....................................TTTTGTTTTGTTTTGTcgct........................................................................................................................................................20CGCT0.500.00----------------------------------------------------------------------------0.50-----
............................................................................................................AGCTGGAGAGATGGCTCAGCggga.............................................................................24GGGA0.500.00--------------------------------0.50-------------------------------------------------
.............................................................................................................GCTGGAGAGATGGCTaaaa.................................................................................19AAAA0.400.00------------------------------------------------------------------------------0.40---
.............................................................................................................GCTGGAGAGATGGCTCAGCcgat.............................................................................23CGAT0.250.00----------0.25-----------------------------------------------------------------------
...............................................................................................................TGGAGAGATGGCTCAGCccg..............................................................................20CCG0.250.00--------------------------------0.25-------------------------------------------------
.............................................................................................................GCTGGAGAGATGGCTagaa.................................................................................19AGAA0.200.00---------0.20------------------------------------------------------------------------
...............................................................................................................TGGAGAGATGGCTCAGatcg..............................................................................20ATCG0.200.00---------------------------------0.20------------------------------------------------
.............................................................................................................GCTGGAGAGATGGCTattt.................................................................................19ATTT0.200.00-------------------------------------------------------------------------------0.20--
....................................................................................................................................AAAGGCTAGGCTCACAACCAAAATATAAGA...............................................3080.120.12---------------------------------------------------------------------------------0.12
TCTTAACCTGAAGGCCACGTTGATTCTTCTGTGTTTCTTTTGTTTTGTTTTGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATAAGAACCACTCTTCTCCTAAGAGGATGTTAATACGTTTCTTCAATGACCTG
...............................................................................................................(((......(((..((((......))))..))).....))).........................................................
..........................................................................................................107.................................................159................................................
SizePerfect hitTotal NormPerfect NormSRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR037937(GSM510475)
293cand2. (cell line)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR073955(GSM629281)
total RNA. (blood)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR206939(GSM723280)
other. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR060845(GSM561991)
total RNA. (brain)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
GSM566422(GSM566422)
Endougenous small RNA from MHV-68 infected mouse S11 cell, treated with TPA. (B cell)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
mjTestesWT2()
Testes Data. (testes)
GSM416732(GSM416732)
MEF. (cell line)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR059773(GSM562835)
CD4_Dicer. (spleen)
SRR206942(GSM723283)
other. (brain)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
...............................................................................................AACATTCTCCTCCAGCTG................................................................................................ 1818.008.00-------8.00--------------------------------------------------------------------------
.............GCCACGTTGATTCTTCTGTGTTTCTTTTG....................................................................................................................................................................... 2913.003.00-------3.00--------------------------------------------------------------------------
...............................................................................................................................................................AGAACCACTCTTCTCCTAAGA............................. 2112.002.00-------2.00--------------------------------------------------------------------------
..............................................................................................atACATTCTCCTCCAGCT................................................................................................. 18at1.000.00---------------------------------1.00------------------------------------------------
.............................................................................................cactCATTCTCCTCCAGCT................................................................................................. 19cact1.000.00--------------------------------------------------1.00-------------------------------
........................................tgggTTGTTTTGTGTTTTTGT.................................................................................................................................................... 21tggg1.000.00-----------------------------------------------------1.00----------------------------
.............................................................................................................................tgccGTTAAAGGCTAGGCTCACA............................................................. 23tgcc1.000.00---1.00------------------------------------------------------------------------------
.......................cggTTCTGTGTTTCTTTTGT...................................................................................................................................................................... 20cgg1.000.00------------------------------1.00---------------------------------------------------
................................................................................................................................cgccAAAGGCTAGGCTCACA............................................................. 20cgcc1.000.00--------------------------------------------1.00-------------------------------------
.........gccGGCCACGTTGATTCTT..................................................................................................................................................................................... 19gcc1.000.00-----------------------1.00----------------------------------------------------------
............................................................................................................tgtTGGAGAGATGGCTCAGCTGTTA............................................................................ 25tgt1.000.00----------------------------1.00-----------------------------------------------------
........................................................................GCTGTATTAAAGTGCTAGTAAGAAACATT............................................................................................................ 2911.001.00----------------------------------------1.00-----------------------------------------
...............................................................................................................................gcGTTAAAGGCTAGGCTCAC.............................................................. 20gc1.000.00---1.00------------------------------------------------------------------------------
.........................................................................................................TCCAGCTGGAGAGATGGCTCAGC................................................................................. 2370.140.14--------------------------------------------------------------------------------0.14-