ID: mmu-mir-688
chr15:102502173-102502347 -
Display Libraries
(9)
AGO2.ip 		(1)
AGO3.ip 		(3)
B-CELL 		(17)
BRAIN 		(3)
CELL-LINE 		(1)
DCR.mut 		(2)
DGCR8.mut 		(10)
EMBRYO 		(9)
ESC 		(4)
FIBROBLAST 		(2)
LIVER 		(3)
OTHER 		(4)
OTHER.mut 		(3)
PIWI.ip 		(1)
PIWI.mut 		(6)
SKIN 		(2)
SPLEEN 		(17)
TESTES 		(1)
THYMUS 		(2)
TOTAL-RNA
Showing top 119 reads
GGACTAGCGCAGGAAAGCCCCCGCCCACCGCCACTGGGGGAGGGACGGGCGAAAGGGCAGTGAAGAAAAGTAGGGGCTTGCTTGGGGAGAGCACCTCGCAGGCGACTACTTATTCCAGCTCGCCCCCCAGCAAGTCCGACAGGAGGTAAACTGGTCGCCTGGGGTGACTTCGCAC
........................................................(((((...(((((((((..((((((..((((......))))))))))..)))))).)))..))).))....................................................
........................................................57..................................................................125................................................
SizePerfect hitTotal NormPerfect NormSRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT4()
Testes Data. (testes)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037937(GSM510475)
293cand2. (cell line)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		mjTestesWT3()
Testes Data. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		mjTestesWT2()
Testes Data. (testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR206939(GSM723280)
other. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR060845(GSM561991)
total RNA. (brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR014236(GSM319960)
10 dpp total. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		RuiDcrKO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dicer skin)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)
...............................................................................................TCGCAGGCGACTACTTATTCCAG.........................................................23176.0076.0021.0017.007.001.009.007.004.001.00--4.00------1.00---------1.00----------2.00-------------------1.00--------------------
...............................................................................................TCGCAGGCGACTACTTATTCCA..........................................................22124.0024.0010.005.004.00-1.00-1.00-----------1.00-------------------------1.00----------1.00-----------------------
..................................................................................................................CCAGCTCGCCCCCCA..............................................15515.6015.60---------8.00-5.40--------0.20------------------------0.80--------------------------0.80-0.40----
...............................................................................................TCGCAGGCGACTACTTATTCCAGt........................................................24T14.0076.003.002.003.002.00---------1.00-------1.00-----------1.00-------1.00-------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCCAt.........................................................23T11.0024.004.006.00---------------------------------------------------------1.00-------------------
.......................................................................................................................TCGCCCCCCAGCAAGTCCGACt..................................22T8.001.00-------------------4.00---4.00-------------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCCAGC........................................................2417.007.001.003.00-1.00--1.00-----------1.00------------------------------------------------------------
..................................................GAAAGGGCAGTGAAGAAAAGTtttt....................................................................................................25TTTT5.000.00---5.00---------------------------------------------------------------------------
..........................................................................................................................CCCCCCAGCAAGTCCGAC...................................1814.004.00------------------------3.00--------------------------------------------1.00---------
...............................................................................................TCGCAGGCGACTACTTATTCt...........................................................21T4.003.002.001.001.00----------------------------------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTC............................................................2013.003.00-1.00------------------------1.00----------------------1.00-----------------------------
...............................................................................................TCGCAGGCGACTACTTATTttt..........................................................22TTT3.000.001.001.00----------------------------1.00------------------------------------------------
............................................................................................................................................AGGAGGTAAACTGGTCGCC................1913.003.00---3.00---------------------------------------------------------------------------
.................................................................................TTGGGGAGAGCACCTCGCAGG.........................................................................2113.003.00---3.00---------------------------------------------------------------------------
.................................................................................TTGGGGAGAGCACCTCGC............................................................................1813.003.00---2.00----------------------1.00----------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCC...........................................................2113.003.001.001.00---1.00-------------------------------------------------------------------------
................................................................................................................................................GGTAAACTGGTCGCCTGGGGTGA........2313.003.00--------3.00----------------------------------------------------------------------
................................ACTGGGGGAGGGACGGGaaat..........................................................................................................................21AAAT3.000.00-------------3.00-----------------------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCCAGa........................................................24A3.0076.001.00----2.00-------------------------------------------------------------------------
..............................................................AAGAAAAGTAGGGGCTTGCTTGGGG........................................................................................2513.003.00----------------3.00--------------------------------------------------------------
...............................................................................................................................CAGCAAGTCCGACAGGAGG.............................1912.002.00----------------2.00--------------------------------------------------------------
..........................................................................................GCACCTCGCAGGCGACTA...................................................................1812.002.00-------------------------2.00-----------------------------------------------------
................................................................GAAAAGTAGGGGCTTGCT.............................................................................................1812.002.00----1.00-------------1.00------------------------------------------------------------
.................................................................................................................................GCAAGTCCGACAGGAGGT............................1812.002.00----------------------2.00--------------------------------------------------------
......................................................................................GAGAGCACCTCGCAGGC........................................................................1712.002.00---2.00---------------------------------------------------------------------------
.............................................................GAAGAAAAGTAGGGGCTTGCTTGGG.........................................................................................2512.002.00-----------------2.00-------------------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTtttt.........................................................23TTTT2.000.00-1.001.00----------------------------------------------------------------------------
........................................AGGGACGGGCGAAAGGGCAGTGA................................................................................................................2312.002.00--------------2.00----------------------------------------------------------------
................................ACTGGGGGAGGGACGGGCG............................................................................................................................1912.002.00-------------2.00-----------------------------------------------------------------
.......................................................................AGGGGCTTGCTTGGGGAGA.....................................................................................1921.501.50--------1.50----------------------------------------------------------------------
................................................................................................................TTCCAGCTCGCCCCCC...............................................1621.501.50-----------1.50-------------------------------------------------------------------
...................................................................................................AGGCGACTACTTATTCCAG.........................................................1911.001.00------1.00------------------------------------------------------------------------
.....................................................AGGGCAGTGAAGAAAAGTAGGGGCT.................................................................................................2511.001.00----------------------------------------------1.00--------------------------------
...............................................................................................TCGCAGGCGACTACTTATTtttc.........................................................23TTTC1.000.001.00------------------------------------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCtt..........................................................22TT1.003.00----------------------------------------1.00--------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCCAtt........................................................24TT1.0024.00-1.00-----------------------------------------------------------------------------
............................................................TGAAGAAAAGTAGGGGCTTGCT.............................................................................................2211.001.00----------------------1.00--------------------------------------------------------
................................................................................................................TTCCAGCTCGCCCCC................................................1531.001.00---------0.67-----------------------------------0.33---------------------------------
..........................................................................................................................CCCCCCAGCAAGTCCGAg...................................18G1.000.00-----------------------------------------------------1.00-------------------------
..............................CCACTGGGGGAGGGACGGGCG............................................................................................................................2111.001.00--------------1.00----------------------------------------------------------------
...................................................................AAGTAGGGGCTTGCTTGGGGAGAGCACCT...............................................................................2911.001.00-------------------------1.00-----------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCta..........................................................22TA1.003.00-1.00-----------------------------------------------------------------------------
..................................TGGGGGAGGGACGGGCGAAAGG.......................................................................................................................2211.001.00---------------------------------------------------------1.00---------------------
................................................................................CTTGGGGAGAGCACCTCGCAGG.........................................................................2211.001.00----------1.00--------------------------------------------------------------------
..................................TGGGGGAGGGACGGGCGAAAGGGCA....................................................................................................................2511.001.00-----------------------------------------------------------------------1.00-------
...............................................................................................TCGCAGGCGACTACTTATTtca..........................................................22TCA1.000.00-1.00-----------------------------------------------------------------------------
........................................AGGGACGGGCGAAAGGGCAGTGAAGAA............................................................................................................2711.001.00----------------------------------1.00--------------------------------------------
...................................GGGGGAGGGACGGGCGAAAGGGCA....................................................................................................................2411.001.00------------------------------------------------------------1.00------------------
.......................................................................................AGAGCACCTCGCAGGCGACTAC..................................................................2211.001.00--1.00----------------------------------------------------------------------------
.......................................................................................................................TCGCCCCCCAGCAAGTCCGAC...................................2111.001.00----------------------------------1.00--------------------------------------------
.....AGCGCAGGAAAGCCCCCGCCCAC...................................................................................................................................................2311.001.00----------1.00--------------------------------------------------------------------
...............................................................................GCTTGGGGAGAGCACCTCGC............................................................................2011.001.00---------------------------1.00---------------------------------------------------
........................................AGGGACGGGCGAAAGGctg....................................................................................................................19CTG1.000.00-------------------------------------------1.00-----------------------------------
...............................................................................GCTTGGGGAGAGCACCT...............................................................................1711.001.00----------------------------------------1.00--------------------------------------
........................................................................................GAGCACCTCGCAGGCGAC.....................................................................1811.001.00-----------------------------------------------------------------1.00-------------
.............................................................GAAGAAAAGTAGGGGCTTGCT.............................................................................................2111.001.00------------------------------------------------------1.00------------------------
...............................................................................................TCGCAGGCGACTACTTATTCCAGaag......................................................26AAG1.0076.00-1.00-----------------------------------------------------------------------------
.........................................................................................................................................GACAGGAGGTAAACTGGTCGCCTGGGG...........2711.001.00--------------------------------------------------------------------1.00----------
...........................................GACGGGCGAAAGGGCAGTGAAGAAA...........................................................................................................2511.001.00--------------1.00----------------------------------------------------------------
.......................................GAGGGACGGGCGAAAaaag.....................................................................................................................19AAAG1.000.00---------------------------------------------------1.00---------------------------
................................................................................................................TTCCAGCTCGCCCCCCA..............................................1711.001.00-----------1.00-------------------------------------------------------------------
.............................................................................................................................CCCAGCAAGTCCGACAGGAGGTAAAC........................2611.001.00-----------------1.00-------------------------------------------------------------
.......................................................................................................................TCGCCCCCCAGCAAGTCCcact..................................22CACT1.000.00-------------------1.00-----------------------------------------------------------
................................................................................................................................AGCAAGTCCGACAGGAGG.............................1811.001.00-----------------1.00-------------------------------------------------------------
.........................................................................GGGCTTGCTTGGGGAGAGCAC.................................................................................2111.001.00------1.00------------------------------------------------------------------------
..........................................GGACGGGCGAAAGGGtcc...................................................................................................................18TCC1.000.00------------------------------------------------------------------1.00------------
.......................................................GGCAGTGAAGAAAAGTAGG.....................................................................................................1911.001.00------------------------------------1.00------------------------------------------
...................................GGGGGAGGGACGGGCGAAAGGGCAa...................................................................................................................25A1.001.00--------------------------------------------------------------1.00----------------
...............................................................................................TCGCAGGCGACTACTTATTCaa..........................................................22AA1.003.00--1.00----------------------------------------------------------------------------
...........................................................................GCTTGCTTGGGGAGAGCAC.................................................................................1911.001.00------------------------------1.00------------------------------------------------
...............................................................................................TCGCAGGCGACTACTTATTCtaa.........................................................23TAA1.003.00--1.00----------------------------------------------------------------------------
....................................................AAGGGCAGTGAAGAAAAGTAGc.....................................................................................................22C1.000.00------------------------------------------1.00------------------------------------
......................................................................................................................................TCCGACAGGAGGTAAACTGG.....................2011.001.00------------------------------------1.00------------------------------------------
...................................GGGGGAGGGACGGGCGAAAGGG......................................................................................................................2211.001.00----------------------1.00--------------------------------------------------------
........................................AGGGACGGGCGAAAGcc......................................................................................................................17CC1.000.00------------------1.00------------------------------------------------------------
..............................................GGGCGAAAGGGCAGTGAAGAAt...........................................................................................................22T1.000.00-1.00-----------------------------------------------------------------------------
.......................CCCACCGCCACTGGGGGAGGGACGGGCGA...........................................................................................................................2911.001.00--------------1.00----------------------------------------------------------------
.................................................................AAAAGTAGGGGCTTGCTTGGGGAGAG....................................................................................2611.001.00------------------1.00------------------------------------------------------------
......................................................................TAGGGGCTTGCTTGGGGA.......................................................................................1820.500.50--------------------------0.50----------------------------------------------------
.........................................................................GGGCTTGCTTGGGGAGAG....................................................................................1820.500.50-------------------------------------------------------------------------0.50-----
......................................................................TAGGGGCTTGCTTGGGG........................................................................................1740.250.25--------------------------------------------0.25----------------------------------
..........................................................................................................................CCCCCCAGCAAGTCC......................................1540.250.25---------------------------------------------------------------------------0.25---
.................................................................................................................TCCAGCTCGCCCCCC...............................................1560.170.17-----------0.17-------------------------------------------------------------------
GGACTAGCGCAGGAAAGCCCCCGCCCACCGCCACTGGGGGAGGGACGGGCGAAAGGGCAGTGAAGAAAAGTAGGGGCTTGCTTGGGGAGAGCACCTCGCAGGCGACTACTTATTCCAGCTCGCCCCCCAGCAAGTCCGACAGGAGGTAAACTGGTCGCCTGGGGTGACTTCGCAC
........................................................(((((...(((((((((..((((((..((((......))))))))))..)))))).)))..))).))....................................................
........................................................57..................................................................125................................................
SizePerfect hitTotal NormPerfect NormSRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT4()
Testes Data. (testes)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037937(GSM510475)
293cand2. (cell line)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		mjTestesWT3()
Testes Data. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		mjTestesWT2()
Testes Data. (testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR206939(GSM723280)
other. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR060845(GSM561991)
total RNA. (brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR014236(GSM319960)
10 dpp total. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		RuiDcrKO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dicer skin)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)
.....................................................................................................tacACTACTTATTCCAGCT....................................................... 19tac18.003.00--3.00-1.00-1.006.00----5.00----------------------------------1.00--------1.00----------------------
....................................................................................................ctacACTACTTATTCCAGCT....................................................... 20ctac12.003.001.00---3.001.00-1.00-------4.00------------1.00-----------------------------------------1.00--------
......................................................................................................acACTACTTATTCCAGCT....................................................... 18ac7.003.00----------2.00----1.00------------1.00----------2.00------------1.00--------------------------
............................................................................................................................CCCCAGCAAGTCCGACAGGAGGTA........................... 2416.006.00--------6.00----------------------------------------------------------------------
.......................................................................................................cACTACTTATTCCAGCT....................................................... 17c5.003.00--1.00-1.002.00-1.00-----------------------------------------------------------------------
........................................................................................................ACTACTTATTCCAGCT....................................................... 1613.003.00----1.00-2.00------------------------------------------------------------------------
.....................................................................................................................aCTCGCCCCCCAGCAAGTCCGACA.................................. 24a3.000.00---------------------3.00---------------------------------------------------------
.....................................................................................................tacACTACTTATTCCAGC........................................................ 18tac2.600.40--0.20--0.200.400.40----1.00----------------------------------------------------------------0.200.20
....................................................................................................ctacACTACTTATTCCAGC........................................................ 19ctac2.200.400.40----1.000.20---0.20----------------0.20------------------------------------------------0.20--
.........................................................................GGGCTTGCTTGGGGAGAGCAC................................................................................. 2112.002.00-------------------------------------1.00---1.00-------------------------------------
...................................................................................................................CAGCTCGCCCCCCAGCAAGTC....................................... 2112.002.00--------------------------------2.00----------------------------------------------
...............................................................................................................................CAGCAAGTCCGACAGGAGGT............................ 2012.002.00--------------------2.00----------------------------------------------------------
...........................................................................................................................CCCCCAGCAAGTCCGACAGGAGGT............................ 2412.002.00---2.00---------------------------------------------------------------------------
............................................................................................................................CCCCAGCAAGTCCGACAGGAGGTAA.......................... 2512.002.00--------------------2.00----------------------------------------------------------
..............................aCACTGGGGGAGGGACGGGCGAAA......................................................................................................................... 24a1.000.00-------------------------------------------------------------1.00-----------------
.........................................................................................AGCACCTCGCAGGCGACTACTTATTCCA.......................................................... 2811.001.00-----------------------------------1.00-------------------------------------------
..........................................................................GGCTTGCTTGGGGAGAGCAC................................................................................. 2011.001.00-------------------------------------1.00-----------------------------------------
........agccGAAAGCCCCCGCCCA.................................................................................................................................................... 19agcc1.000.00-----------------------------1.00-------------------------------------------------
...........................................................................................................................CCCCCAGCAAGTCCGACAGGAGGTA........................... 2511.001.00---------------------------------1.00---------------------------------------------
................................................................................................................................AGCAAGTCCGACAGGAGGT............................ 1911.001.00---------------------------------------------------------------1.00---------------
.......................................................................................................................aCGCCCCCCAGCAAGTCCGACAGGAG.............................. 26a1.000.00------------------------------------------------1.00------------------------------
...................................................................................................................tAGCTCGCCCCCCAGCAAGTCCGACAGG................................ 28t1.000.00-------------------------------1.00-----------------------------------------------
.............................................................................................CCTCGCAGGCGACTACTT................................................................ 1811.001.00--------------------------------------------------1.00----------------------------
.........................................................................................................................GCCCCCCAGCAAGTCCGACAGGAGGTA........................... 2711.001.00------------------------------------------1.00------------------------------------
.............................................................................................................................CCCAGCAAGTCCGACAGGAGGTA........................... 2311.001.00-------------------------------1.00-----------------------------------------------
................................................................................................CGCAGGCGACTACTTATTCC........................................................... 2011.001.00---1.00---------------------------------------------------------------------------
.................................................................................................................TCCAGCTCGCCCCCCA.............................................. 1611.001.00-----------------------------1.00-------------------------------------------------
.....................................aatcGGGACGGGCGAAAGGGC..................................................................................................................... 21aatc1.000.00----------------------------------------------------------------1.00--------------
.................................................................................................................................GCAAGTCCGACAGGAGGTAAAC........................ 2211.001.00-------------------------------------------------------------------1.00-----------
................................................................................................................TTCCAGCTCGCCCCCCAGCA........................................... 2011.001.00--------------1.00----------------------------------------------------------------
.....................................................................................................................GCTCGCCCCCCAGCAAGTCCGACAGG................................ 2611.001.00-----------------------------------1.00-------------------------------------------
...................................................................................................................CAGCTCGCCCCCCAGCAAGTCCGA.................................... 2411.001.00-------1.00-----------------------------------------------------------------------
................................................................................................................TTCCAGCTCGCCCCCC............................................... 1620.500.50-------------------------------------------0.50-----------------------------------
......................................................................................................acACTACTTATTCCAGC........................................................ 17ac0.400.40-----0.20---------0.20---------------------------------------------------------------
........................................................................................................ACTACTTATTCCAGC........................................................ 1550.400.40----0.200.20-------------------------------------------------------------------------
.........................................................................................................CTACTTATTCCAGCT....................................................... 1550.200.20-------0.20-----------------------------------------------------------------------
.....................................................................................................tgcACTACTTATTCCAGC........................................................ 18tgc0.200.40------------0.20------------------------------------------------------------------