| (1) BRAIN | (1) CELL-LINE | (1) OTHER | (3) OTHER.mut | (1) PIWI.ip | (8) TESTES |
| ACATCGCGGGGAATATGGGAGGGGTCAAGGGAGAATTATACAAAGAACTAAGAAGTGGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCAGGAAGCGGGCACTTTGCATCTTATCTCCGGAACATCGATCCTCTTGACAGCCTTGGGTGTCAGGCTGGGCTCACTTGTGACTCATGTCCTCGGATGTCATGGGAACTCAGGAAGAG ..................................................((((((......((.(((.......))).))....))))))...................(((.......)))..................................................... .............................................................62.........................................................................137...................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR345197(SRX097258) source: size fractionated RNA from mouse hipp. (brain) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR039154(GSM471931) HL1_siSrf2_smallRNAseq. (muscle) | SRR037937(GSM510475) 293cand2. (cell line) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................ATCGATCCTCTTGACt................................................................... | 16 | T | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................CTTTGCATCTTATCTCCGtta.................................................................................... | 21 | TTA | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................TGACATGGGGGCCGAAGTCAGGCGtac.................................................................................................................... | 27 | TAC | 0.50 | 0.00 | - | - | - | - | - | - | 0.50 | - | - | - | - |
| .............................................................TCTGCTGACATGGGGGCCGAAGTCAGGa........................................................................................................................ | 28 | A | 0.50 | 0.00 | - | - | - | - | - | 0.50 | - | - | - | - | - |
| ..................................................................TGACATGGGGGCCGAAGTCAGacgt...................................................................................................................... | 25 | ACGT | 0.50 | 0.00 | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ..................................................................................................CGGGCACTTTGCATCTTATCTCCGGAA.................................................................................... | 27 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | 0.12 | - |
| ACATCGCGGGGAATATGGGAGGGGTCAAGGGAGAATTATACAAAGAACTAAGAAGTGGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCAGGAAGCGGGCACTTTGCATCTTATCTCCGGAACATCGATCCTCTTGACAGCCTTGGGTGTCAGGCTGGGCTCACTTGTGACTCATGTCCTCGGATGTCATGGGAACTCAGGAAGAG ..................................................((((((......((.(((.......))).))....))))))...................(((.......)))..................................................... .............................................................62.........................................................................137...................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR345197(SRX097258) source: size fractionated RNA from mouse hipp. (brain) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR039154(GSM471931) HL1_siSrf2_smallRNAseq. (muscle) | SRR037937(GSM510475) 293cand2. (cell line) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................gagcGGTCAAGGGAGAATTATACAAAGA................................................................................................................................................................... | 28 | gagc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................gaccCAAGGGAGAATTATA......................................................................................................................................................................... | 19 | gacc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................tcaGGCACTTTGCATCTTATCTCCGGAA.................................................................................... | 28 | tca | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................gaATCTGCTGACATGGGGG.................................................................................................................................... | 19 | ga | 0.67 | 0.00 | - | - | - | - | 0.67 | - | - | - | - | - | - |
| ................................................................aCTGACATGGGGGCCGAAGTCA........................................................................................................................... | 22 | a | 0.50 | 0.00 | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ..................................................................................................CGGGCACTTTGCATCTTATCTCCGGA..................................................................................... | 26 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | 0.12 |