ID: mmu-mir-654
chr12:110961378-110961561 +
Display Libraries
(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
AGO3.ip 		(4)
BRAIN 		(3)
CELL-LINE 		(2)
DGCR8.mut 		(3)
EMBRYO 		(3)
ESC 		(1)
LIVER 		(4)
OTHER 		(1)
OVARY 		(1)
PIWI.mut 		(4)
SKIN 		(2)
TESTES
Showing top 51 reads
TCCTGGGTGACATGATCCACCAGGGAGATGAGGCTGGGCGCAGTGCCCTCCTCGGTAAGTGGGAAGATGGTAAGCTGCAGAACATGTGTGTTTCTCATGTCATATGTCTGCTGACCATCACCTTTGGGTCTCTGCCTGTGGAGCCAGCTTGGCACAGAGGCCGAGGCGCCTTTCAACATTCTGT
.....................................................((...((((((.....((((.(((((((............)))))))))))..)))))).)).......................................................
.........................................................58...................................................................127.......................................................
SizePerfect hitTotal NormPerfect NormSRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037937(GSM510475)
293cand2. (cell line)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037936(GSM510474)
293cand1. (cell line)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206941(GSM723282)
other. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
......................................................................................................TATGTCTGCTGACCATCACCT.............................................................21127.0027.0010.009.007.00------------1.00---------
......................................................................................................TATGTCTGCTGACCATCACCa.............................................................21A25.0023.0011.004.0010.00----------------------
......................................................................................................TATGTCTGCTGACCATCACC..............................................................20123.0023.009.006.006.00------------------1.00-1.00-
......................................................................................................TATGTCTGCTGACCATCA................................................................18111.0011.00--1.0010.00---------------------
......................................................................................................TATGTCTGCTGACCATCACCat............................................................22AT10.0023.00-7.003.00----------------------
......................................................................................................TATGTCTGCTGACCATCACCatt...........................................................23ATT6.0023.001.003.002.00----------------------
......................................................................................................TATGTCTGCTGACCATCACt..............................................................20T4.000.003.001.00-----------------------
......................................................................................................TATGTCTGCTGACCATCACCTT............................................................2214.004.00-1.001.00----1.00--1.00--------------
......................................................................................................TATGTCTGCTGACCATCACCTTT...........................................................2313.003.001.001.00------------1.00----------
......................................................................................................TATGTCTGCTGACCATCACCTa............................................................22A3.0027.001.001.001.00----------------------
......................................................................................................TATGTCTGCTGACCATCACCaa............................................................22AA3.0023.001.002.00-----------------------
......................................................................................................TATGTCTGCTGACCATCACCctat..........................................................24CTAT2.0023.00-1.001.00----------------------
.................................................................................................TGTCATATGTCTGCTGACC....................................................................1912.002.00--------2.00----------------
............................................................GGGAAGATGGTAAGCTGCAGAA......................................................................................................2212.002.00----2.00--------------------
....................................................................................................CATATGTCTGCTGACCATCACC..............................................................2212.002.00-1.001.00----------------------
......................................................................................................TATGTCTGCTGACCATCACCata...........................................................23ATA2.0023.001.001.00-----------------------
....................................................................................................CATATGTCTGCTGACCATCACt..............................................................22T2.001.001.00-1.00----------------------
.......................................................................AAGCTGCAGAACATGTGTGTTTCTC........................................................................................2512.002.00-----2.00-------------------
......................................................................................................TATGTCTGCTGACCATCACtt.............................................................21TT2.000.002.00------------------------
....................................................................................................CATATGTCTGCTGACCAT..................................................................1812.002.002.00------------------------
..............................................................GAAGATGGTAAGCTGCAGAACATGTG................................................................................................2612.002.00----2.00--------------------
......................................................................................................TATGTCTGCTGACCATCACCTat...........................................................23AT2.0027.002.00------------------------
.......................................................TAAGTGGGAAGATGGcggc..............................................................................................................19CGGC2.000.00----------------1.00-1.00------
....................................................................................................CATATGTCTGCTGACCctca................................................................20CTCA1.000.00-1.00-----------------------
......................................................................................................TATGTCTGCTGACCATCACCatta..........................................................24ATTA1.0023.001.00------------------------
.................................................CCTCGGTAAGTGGGAAGATGGTAAGCTGCA.........................................................................................................3011.001.00------1.00------------------
....................................................................................................CATATGTCTGCTGACCATCACa..............................................................22A1.001.00-1.00-----------------------
....................................................................................................CATATGTCTGCTGACCATCA................................................................2011.001.001.00------------------------
......................................................................................................TATGTCTGCTGACCATCACttaa...........................................................23TTAA1.000.00--1.00----------------------
......................................................................................................TATGTCTGCTGACCATCACCcat...........................................................23CAT1.0023.001.00------------------------
...................................................................TGGTAAGCTGCAGAACATGTGT...............................................................................................2211.001.00-------1.00-----------------
.....................................................................................................ATATGTCTGCTGACCATCACC..............................................................2111.001.001.00------------------------
.........................................................................................................GTCTGCTGACCATCACCTTT...........................................................2011.001.00--------------------1.00----
...................................................................TGGTAAGCTGCAGAACATGTat...............................................................................................22AT1.000.00------------1.00------------
...........................................................TGGGAAGATGGTAAGtgg...........................................................................................................18TGG1.000.00-------------1.00-----------
.....................................................................................................ATATGTCTGCTGACCctca................................................................19CTCA1.000.00-1.00-----------------------
....................................................................................................CATATGTCTGCTGACCATCACCa.............................................................23A1.002.00--1.00----------------------
......................................................................................................TATGTCTGCTGACCATCccc..............................................................20CCC1.000.00--1.00----------------------
......................................................................................................TATGTCTGCTGACCATCACCTTTt..........................................................24T1.003.00-1.00-----------------------
......................................................................................................TATGTCTGCTGACCATCACtta............................................................22TTA1.000.001.00------------------------
...........................................................................................................................................GGAGCCAGCTTGGCACAGAGG........................2111.001.00-----------1.00-------------
....................................................CGGTAAGTGGGAAGATGGc.................................................................................................................19C1.000.00---------1.00---------------
......................................................................................................TATGTCTGCTGACCATCACaa.............................................................21AA1.000.00-1.00-----------------------
..............................AGGCTGGGCGCAGTGaat........................................................................................................................................18AAT1.000.00---1.00---------------------
......................................................................................................TATGTCTGCTGACCATCACCattt..........................................................24ATTT1.0023.00-1.00-----------------------
.....................................................GGTAAGTGGGAAGATGGTAA...............................................................................................................2011.001.00----------------------1.00--
......................................................................................................TATGTCTGCTGACCATCACCTc............................................................22C1.0027.00-1.00-----------------------
................................................TCCTCGGTAAGTGGGAcgg.....................................................................................................................19CGG1.000.00-----------------1.00-------
....................................................................................................CATATGTCTGCTGACCATCAC...............................................................2111.001.00-------------------1.00-----
TCCTGGGTGACATGATCCACCAGGGAGATGAGGCTGGGCGCAGTGCCCTCCTCGGTAAGTGGGAAGATGGTAAGCTGCAGAACATGTGTGTTTCTCATGTCATATGTCTGCTGACCATCACCTTTGGGTCTCTGCCTGTGGAGCCAGCTTGGCACAGAGGCCGAGGCGCCTTTCAACATTCTGT
.....................................................((...((((((.....((((.(((((((............)))))))))))..)))))).)).......................................................
.........................................................58...................................................................127.......................................................
SizePerfect hitTotal NormPerfect NormSRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037937(GSM510475)
293cand2. (cell line)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037936(GSM510474)
293cand1. (cell line)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206941(GSM723282)
other. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
..................................................................................................................attTCACCTTTGGGTCTC.................................................... 18att1.000.00-----1.00-------------------
....................................................................................................................................................................GGCGCCTTTCAACATTCTG. 1911.001.00------1.00------------------
.................................................................................................................................CTCTGCCTGTGGAGCCA...................................... 1750.200.20------------------------0.20