ID: mmu-mir-5120
chr4:44620313-44620490 -
Display Libraries
(11)
B-CELL 		(4)
BRAIN 		(2)
EMBRYO 		(4)
ESC 		(6)
LIVER 		(1)
OTHER 		(4)
OTHER.mut 		(2)
SPLEEN 		(4)
TESTES 		(1)
TOTAL-RNA
Showing top 63 reads
AAAACAAAACAACAAAAACCCTAGCTTTCTGACTTCTCAAAAACGTAGAAGAGCTGGTCCTTTGGGGCTGTGGTGCCACCAGCTGTGACAGAGTGGAGCTCAGTGGCAGCAGCCCCTTCAGACAGGCTTCCATGGTCTGCAGCAAAGGCCTCCTCATTCACGTTAGAAGGTATGTATG
........................................................((((((......))).)))(((((.((.(((.....))).)).)))))......................................................
........................................................57.......................................................114..............................................................
SizePerfect hitTotal NormPerfect NormSRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR037903(GSM510439)
testes_rep4. (testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR073954(GSM629280)
total RNA. (blood)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037902(GSM510438)
testes_rep3. (testes)		GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)
..........................................ACGTAGAAGAGCTGGTCCT.....................................................................................................................19130.0030.005.0019.00-1.001.001.00---3.00-------------------------
........................................AAACGTAGAAGAGCTGGTCCT.....................................................................................................................21120.0020.0012.003.002.002.001.00------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAGC...............................................................................................23117.0017.00-1.00---1.006.00-1.00--2.003.00-1.00---1.00------------1.00---
.......................................AAAACGTAGAAGAGCTGGTCC......................................................................................................................21114.0014.008.004.00-1.00---1.00---------------------------
.......................................AAAACGTAGAAGAGCTGGTCCT.....................................................................................................................22114.0014.003.006.004.001.00-------------------------------
.............................................................TTGGGGCTGTGGTGCCACCAGC...............................................................................................22110.0010.001.003.00------4.00------1.00--------1.00----------
...........................................CGTAGAAGAGCTGGTCCT.....................................................................................................................1819.009.005.002.00--1.00--1.00---------------------------
.........................................AACGTAGAAGAGCTGGTCCT.....................................................................................................................2018.008.001.004.001.001.00-1.00-----------------------------
....................................TCAAAAACGTAGAAGAGCTGGTCCT.....................................................................................................................2518.008.005.002.00--1.00------------------------------
.............................................................TTGGGGCTGTGGTGCCACCAGCT..............................................................................................2317.007.001.00-1.001.00---1.00---1.00---1.00------1.00------------
.....................................CAAAAACGTAGAAGAGCTGGTCCT.....................................................................................................................2415.005.004.00---1.00------------------------------
......................................AAAAACGTAGAAGAGCTGGTCCT.....................................................................................................................2314.004.003.001.00---------------------------------
.................................TTCTCAAAAACGTAGAAGAGCTGGTCC......................................................................................................................2714.004.003.001.00---------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAGCT..............................................................................................2414.004.00----------2.00-----------------1.001.00-----
...................................CTCAAAAACGTAGAAGAGCTGGTCCT.....................................................................................................................2613.003.003.00----------------------------------
........................................AAACGTAGAAGAGCTGGTCC......................................................................................................................2013.003.003.00----------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAG................................................................................................2213.003.00---2.00--------------------------1.00----
......................................AAAAACGTAGAAGAGCTGGTCC......................................................................................................................2213.003.002.001.00---------------------------------
.............................................................TTGGGGCTGTGGTGCCACCAGCg..............................................................................................23G2.0010.00--1.001.00-------------------------------
..................................TCTCAAAAACGTAGAAGAGCTGGTCCT.....................................................................................................................2712.002.001.00---1.00------------------------------
.............................................................TTGGGGCTGTGGTGCCACCcgct..............................................................................................23CGCT2.000.00--2.00--------------------------------
.....................................CAAAAACGTAGAAGAGCTGGTCC......................................................................................................................2312.002.002.00----------------------------------
............................................................TTTGGGGCTGTGGTGCCACCcgc...............................................................................................23CGC2.001.00--1.00---1.00----------------------------
...................................CTCAAAAACGTAGAAGAGCTGGTCC......................................................................................................................2512.002.002.00----------------------------------
..............................................................TGGGGCTGTGGTGCCACCAGCT..............................................................................................2211.001.00--1.00--------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAt................................................................................................22T1.000.00--1.00--------------------------------
.....................................................................................TGACAGAGTGGAGCTCAGTGGCAGCtgcc................................................................29TGCC1.000.00-------1.00---------------------------
..................................TCTCAAAAACGTAGAAGAGCTGGTCC......................................................................................................................2611.001.001.00----------------------------------
............................................................TTTGGGGCTGTGGTGCCACCcg................................................................................................22CG1.001.00--1.00--------------------------------
..........................................................................................GAGTGGAGCTCAGTGGCAGCAGt.................................................................23T1.000.001.00----------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAGCTt.............................................................................................25T1.004.00---------------------1.00-------------
............................................................TTTGGGGCTGTGGTGCCACaa.................................................................................................21AA1.000.00-----------------1.00-----------------
............................................................TTTGGGGCTGTGGTGCCACCAGa...............................................................................................23A1.003.001.00----------------------------------
..................................................................................................CTCAGTGGCAGCAGCCCCTTCc..........................................................22C1.000.00-------1.00---------------------------
............................................................TTTGGGGCTGTGGTGCCAtaat................................................................................................22TAAT1.000.00---------1.00-------------------------
.............................................................TTGGGGCTGTGGTGCCACCAGCTttt...........................................................................................26TTT1.007.00-1.00---------------------------------
.................................TTCTCAAAAACGTAGAAGAGCTGGTCCT.....................................................................................................................2811.001.001.00----------------------------------
............................................................TTTGGGGCTGTGGTGCCACC..................................................................................................2011.001.00--------------1.00--------------------
.............................................................TTGGGGCTGTGGTGCCACCAGCa..............................................................................................23A1.0010.00--1.00--------------------------------
..........................................................................................GAGTGGAGCTCAGTGGCAGC....................................................................2011.001.00---------1.00-------------------------
.............................................................TTGGGGCTGTGGTGCCACCAGtaaa............................................................................................25TAAA1.000.00-----1.00-----------------------------
......................................AAAAACGTAGAAGAGCTGG.........................................................................................................................1911.001.00---1.00-------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAGCTaga...........................................................................................27AGA1.004.00--------1.00--------------------------
..........................................ACGTAGAAGAGCTGGTCgt.....................................................................................................................19GT1.000.00----1.00------------------------------
....................................TCAAAAACGTAGAAGAGCTGGTCC......................................................................................................................2411.001.001.00----------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAGt...............................................................................................23T1.003.00----------1.00------------------------
............................................................TTTGGGGCTGTGGTGCCAttaa................................................................................................22TTAA1.000.00-----1.00-----------------------------
............................................................TTTGGGGCTGTGGTGCCACCAGCat.............................................................................................25AT1.0017.00-----1.00-----------------------------
...............................................................GGGGCTGTGGTGCCAtggc................................................................................................19TGGC1.000.00--------------------1.00--------------
............................................................TTTGGGGCTGTGGTGCCACCAGCTa.............................................................................................25A1.004.00-1.00---------------------------------
............................................................TTTGGGGCTGTGGTGCCAaa..................................................................................................20AA1.000.00-----1.00-----------------------------
.............................................................TTGGGGCTGTGGTGCCACCAGCTaaaa..........................................................................................27AAAA1.007.00-------------------------1.00---------
............................................................TTTGGGGCTGTGGTGCCACCAGtaaa............................................................................................26TAAA1.003.00----------1.00------------------------
................................................................................................AGCTCAGTGGCAGCAcgg................................................................18CGG1.000.00-----------------------1.00-----------
.......................................AAAACGTAGAAGAGCTGGTC.......................................................................................................................2011.001.00----1.00------------------------------
............................................................TTTGGGGCTGTGGTGCCACCAGCTaaat..........................................................................................28AAAT1.004.00-------1.00---------------------------
..............................................................................................GGAGCTCAGTGGCAGCAGC.................................................................1911.001.00-----------1.00-----------------------
........................................AAACGTAGAAGAGCTGGgcct.....................................................................................................................21GCCT1.000.001.00----------------------------------
AAAACAAAACAACAAAAACCCTAGCTTTCTGACTTCTCAAAAACGTAGAAGAGCTGGTCCTTTGGGGCTGTGGTGCCACCAGCTGTGACAGAGTGGAGCTCAGTGGCAGCAGCCCCTTCAGACAGGCTTCCATGGTCTGCAGCAAAGGCCTCCTCATTCACGTTAGAAGGTATGTATG
........................................................((((((......))).)))(((((.((.(((.....))).)).)))))......................................................
........................................................57.......................................................114..............................................................
SizePerfect hitTotal NormPerfect NormSRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR037903(GSM510439)
testes_rep4. (testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR073954(GSM629280)
total RNA. (blood)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037902(GSM510438)
testes_rep3. (testes)		GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)
actcACAAAACAACAAAAA................................................................................................................................................................ 19actc3.000.00-------------2.00------------------1.00--
..................................................................................agggGACAGAGTGGAGCTC............................................................................. 19aggg2.000.00---------------------------1.00-----1.00-
..........acCAAAAACCCTAGCTTTCT.................................................................................................................................................... 20ac1.000.00--------------------------1.00--------
....tttAACAACAAAAACCCTAG.......................................................................................................................................................... 20ttt1.000.00----------------1.00------------------
.....................................................................................................................................tGTCTGCAGCAAAGGCC............................ 17t1.000.00-------------------1.00---------------
.......AACAACAAAAACCCTAGC......................................................................................................................................................... 1850.400.40----------------0.20-----------------0.20