ID: mmu-mir-5118
chr16:55494794-55494960 +
Display Libraries
(6)
AGO2.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(13)
BRAIN 		(5)
EMBRYO 		(3)
ESC 		(1)
FIBROBLAST 		(1)
LIVER 		(1)
LUNG 		(2)
OTHER 		(5)
OTHER.mut 		(1)
PIWI.ip 		(1)
SKIN 		(1)
SPLEEN 		(11)
TESTES 		(1)
THYMUS
Showing top 36 reads
TTAAAGAAAGCACTACTTGGTGACACTGACACATGCATTTAATCCTAGTACTTAGGAGGCAGAGGTTGGCTGATCTCTGCTTGAGTTCGAAGGTTAGGCCAGCCTGGTCTCCAAAGAGAGTTCCAAGACAGCCAGGACTACGCAGAGAAACCCTGTCTCAAAGAAAC
.......................................................(((((..((((((((((((((..((....))....))))))).))))))).)))))........................................................
..................................................51..........................................................111......................................................
SizePerfect hitTotal NormPerfect NormSRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT3()
Testes Data. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)
............................................................................................GTTAGGCCAGCCTGGcgtt........................................................19CGTT4.000.00-2.00--1.00-------1.00----------------------------
.........................................................................................AAGGTTAGGCCAGCCTGGcgtt........................................................22CGTT2.330.33-0.67------------------------0.67-------0.33-0.330.33---
.........................................................GGCAGAGGTTGGCTGttct...........................................................................................19TTCT2.000.00--1.00----------1.00---------------------------
...........................................................................................................................................ACGCAGAGAAACCCTGTCTtt.......21TT2.000.00---1.00----1.00--------------------------------
.........................................................GGCAGAGGTTGGCTGtttt...........................................................................................19TTTT1.000.001.00----------------------------------------
.....................................................AGGAGGCAGAGGTTGcag................................................................................................18CAG1.000.00------1.00----------------------------------
........................................................................................GAAGGTTAGGCCAGCCT..............................................................1721.001.00----0.50----------------------0.50-------------
...........................................................................................................................CAAGACAGCCAGGACTACaata......................22AATA1.000.00------------------------1.00----------------
.........................................................................................................................................CTACGCAGAGAAACCCTGTCTtttt.....25TTTT1.000.00-----------1.00-----------------------------
..................................................................................................................AGAGAGTTCCAAGACAGCCAGGgcca...........................26GCCA1.000.00------------------1.00----------------------
.........................................................GGCAGAGGTTGGCTGttcc...........................................................................................19TTCC1.000.001.00----------------------------------------
......................................................GGAGGCAGAGGTTGGCTGtg.............................................................................................20TG1.000.00---------1.00-------------------------------
.................................................................................TGAGTTCGAAGGTTAtat....................................................................18TAT1.000.001.00----------------------------------------
...........................................................................................................................CAAGACAGCCAGGACTACGCAGAGAA..................2611.001.00---1.00-------------------------------------
.........................................................GGCAGAGGTTGGCTGATtt...........................................................................................19TT1.000.00-----------------1.00-----------------------
.........................................................................................AAGGTTAGGCCAGCCTGGcgt.........................................................21CGT0.670.33--------------------------------0.33-----0.33--
........................................................................................GAAGGTTAGGCCAGCCTGG............................................................1920.500.50-------------------------------0.50---------
........................................................................................GAAGGTTAGGCCAGCCTGGc...........................................................20C0.500.50-----------------------------0.50-----------
........................................................................................GAAGGTTAGGCCAGCCTGGcg..........................................................21CG0.500.50----------------------------0.50------------
.....................................................................................................................GAGTTCCAAGACAGCCcgca..............................20CGCA0.500.00------------------------------0.50----------
.........................................................................................AAGGTTAGGCCAGCCTGG............................................................1830.330.33---------------------------------0.33-------
.........................................................................................AAGGTTAGGCCAGCCTGGcgg.........................................................21CGG0.330.33-----------------------------------0.33-----
TTAAAGAAAGCACTACTTGGTGACACTGACACATGCATTTAATCCTAGTACTTAGGAGGCAGAGGTTGGCTGATCTCTGCTTGAGTTCGAAGGTTAGGCCAGCCTGGTCTCCAAAGAGAGTTCCAAGACAGCCAGGACTACGCAGAGAAACCCTGTCTCAAAGAAAC
.......................................................(((((..((((((((((((((..((....))....))))))).))))))).)))))........................................................
..................................................51..........................................................111......................................................
SizePerfect hitTotal NormPerfect NormSRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT3()
Testes Data. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)
................................................................................................tGCCAGCCTGGTCTCCAAA.................................................... 19t2.000.00--------------1.00------1.00-------------------
...............................................................................................agttCAGCCTGGTCTCCAA..................................................... 19agtt1.000.00-------1.00---------------------------------
......................................................................................................................................ttACTACGCAGAGAAACCCTG............ 21tt1.000.00----------------1.00------------------------
..................agcGACACTGACACATGCA.................................................................................................................................. 19agc1.000.00-------------------------1.00---------------
.............................................................................................agaaGCCAGCCTGGTCTCCAA..................................................... 21agaa1.000.00-----------------------1.00-----------------
..........................ttgCACATGCATTTAATCCTA........................................................................................................................ 21ttg1.000.00--------------------1.00--------------------
..................................................................................................................................tcctGGACTACGCAGAGAA.................. 19tcct1.000.00-------------------1.00---------------------
.................................................................................................................................................ttttACCCTGTCTCAAAGA... 19tttt1.000.00---------------1.00-------------------------
.....................................................................................................................tAGTTCCAAGACAGCCAGGACTACG......................... 25t1.000.00-----1.00-----------------------------------
...........................................................................................ttTTAGGCCAGCCTGGTCTCC....................................................... 21tt1.000.00----------1.00------------------------------
........................................................................................................................tcaCAAGACAGCCAGGAC............................. 18tca1.000.00--1.00--------------------------------------
................................................................................................cggCAGCCTGGTCTCCAAAGAGAG............................................... 24cgg1.000.00----------------------1.00------------------
...................................................................................................................................CCAGGACTACGCAGAGAAACCCTGTCTCA....... 2970.140.14---------------------------------------0.14-
.......................................................................................................................................GACTACGCAGAGAAACCCTGTCTCAA...... 26100.100.10----------------------------------------0.10
.....................................................................................................................................AGGACTACGCAGAGAAACCCTGTCTCAA...... 28100.100.10-----0.10-----------------------------------