ID: mmu-mir-5116
chrX:53840979-53841141 -
Display Libraries
(2)
AGO1.ip 		(1)
AGO2.ip 		(2)
AGO3.ip 		(11)
B-CELL 		(6)
BRAIN 		(2)
CELL-LINE 		(10)
EMBRYO 		(4)
ESC 		(3)
FIBROBLAST 		(1)
HEART 		(9)
LIVER 		(5)
LYMPH 		(8)
OTHER 		(8)
OTHER.mut 		(1)
OVARY 		(5)
PIWI.ip 		(2)
PIWI.mut 		(4)
SKIN 		(10)
SPLEEN 		(24)
TESTES 		(3)
THYMUS 		(2)
TOTAL-RNA
Showing top 159 reads
GAACACATTACTTGTGTTAAACTCTATAGGTGTAAAGGGAATCACTGCGGATTTTGATAGGAACCCCGCCTGATGCTTTTTGGTTTGTTTCAGGCAGGGTCTTCATATCGAGAAGCTCTTTTACTTGGTAGCATTTTTTGATTAGGAATGAACCTCAGCCTTT
...................................................(((((((((((((((.((((((.((..........)).)))))).)))).))).))))))))..................................................
..................................................51............................................................113................................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR073955(GSM629281)
total RNA. (blood)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR073954(GSM629280)
total RNA. (blood)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		GSM416732(GSM416732)
MEF. (cell line)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206941(GSM723282)
other. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (testes)		SRR077865(GSM637802)
18-30 nt small RNAs. (liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR206942(GSM723283)
other. (brain)		GSM475281(GSM475281)
total RNA. (testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR037926(GSM510464)
e9p5_rep4. (embryo)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
...................................................TTTTGATAGGAACCCCGCCTGA..........................................................................................221125.00125.0052.005.003.00-1.0010.00--6.00------5.001.00-1.004.002.00---2.00-2.001.00-1.00-1.00-1.00---1.001.00-1.00----3.002.00-2.001.00----1.00--2.00-2.002.00-2.00----------1.00-------1.00----1.00----1.00-----1.00-1.001.00--
....................................................TTTGATAGGAACCCCGCCTGA..........................................................................................21177.0077.0030.003.004.00-2.002.00--3.006.00----1.002.00------7.00--2.00--2.00--2.00------1.00--------1.001.001.00--2.00--1.00--1.00----1.00------1.00------------------------------1.00-
....................................................TTTGATAGGAACCCCGCCTGAT.........................................................................................22144.0044.0019.006.007.00-----1.00-----1.00-----2.00----1.00-1.001.00---------1.00---------------1.00---1.00------------------1.00--------------1.00----------
........................................................................................TTCAGGCAGGGTCTTCATATCG.....................................................22133.0033.0015.007.00--3.00-----------1.00--1.00-------1.00----------------3.00----------------------------------------1.00----1.00------------
........................................................................................TTCAGGCAGGGTCTTCATATCGA....................................................23130.0030.006.002.001.00-5.00-----------1.002.00--2.00----1.001.001.00-1.00-1.00--2.00--1.00-1.00--------------------------------1.00----------------------1.00-------
...................................................TTTTGATAGGAACCCCGCCTGAT.........................................................................................23127.0027.0012.003.002.00-1.00-----------2.00-1.00---------------------1.00--------------1.00---------1.001.00-1.00-------------1.00--------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAGt..................................................25T13.006.0010.00----2.00-----------------------1.00-------------------------------------------------------------------------
.....................................................TTGATAGGAACCCCGCCTGAT.........................................................................................21112.0012.002.00-1.00------5.00----3.00------------------1.00---------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGt..........................................................................................21T11.001.005.002.002.00-----------1.00-1.00--------------------------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTGt..........................................................................................22T10.003.007.001.00---1.00---------------------------------------------------------------1.00---------------------------------
..............TGTTAAACTCTATAGGTGTAAAGGGA...........................................................................................................................26110.0010.00---1.00--1.00-----3.00-------------------1.00---------1.002.00------1.00----------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAGA..................................................2519.009.00----1.00------------1.00-1.00--------------2.00--1.00-2.00--------------------------------------------------------------1.00
........................................................................................TTCAGGCAGGGTCTTCATAT.......................................................2018.008.005.001.002.00----------------------------------------------------------------------------------------------------
..............................................................................................................................GGTAGCATTTTTTGATTAGGAAT..............2317.007.00-----------3.00---------2.00-2.00-------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAG...................................................2416.006.002.00----1.00-------------------1.00---1.00-----------------------------------1.00-------------------------------------
.........................................................................TGCTTTTTGGTTTGTTTCAGGCAGG.................................................................2515.005.00---2.00--1.00---1.00-------------------------------------------------------------------------1.00------------------
.............................................................................TTTTGGTTTGTTTCAGGCAGGGTCTTC...........................................................2714.004.00-------1.00-----1.00----------------1.00-------------------1.00----------------------------------------------------
.....................................................................................................................................TTTTTTGATTAGGAATGAACCTCAGC....2614.004.00------------2.00-------------------2.00----------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTGAa.........................................................................................23A4.00125.001.00-------1.00--------------------1.00-----------------1.00-------------------------------------------------------
..........................TAGGTGTAAAGGGAATCACTGCGGAT...............................................................................................................2614.004.00---1.00---------1.00----1.00--------------------------------------------------------------------1.00---------------
.........ACTTGTGTTAAACTCTATAGGTGT..................................................................................................................................2414.004.00-----------1.00---------2.00-1.00-------------------------------------------------------------------------------
............................................................................TTTTTGGTTTGTTTCAGGCAGGGTCTT............................................................2714.004.00-------2.00-----2.00-----------------------------------------------------------------------------------------
.....................................................TTGATAGGAACCCCGCCTGA..........................................................................................2014.004.001.001.00-------1.00----1.00----------------------------------------------------------------------------------------
......................TCTATAGGTGTAAAGGGAATCACTGC...................................................................................................................2614.004.00---2.00------1.00--------------------------------------------------------------------1.00-----------------------
........................TATAGGTGTAAAGGGAATCACTGCGG.................................................................................................................2613.003.00-------2.00----------------------1.00------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGt....................................................23T3.0033.00-----------------2.00---------------1.00---------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTGAaa........................................................................................24AA3.00125.00-1.00--------------------------1.00-----------------------------------1.00--------------------------------------
.........................................................................................................TATCGAGAAGCTCTTTTACTTGGTAGC...............................2713.003.00------3.00------------------------------------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTG...........................................................................................2113.003.00----2.00---------------------1.00----------------------------------------------------------------------------
.......TTACTTGTGTTAAACTCTATAGGTGTA.................................................................................................................................2713.003.00-------1.00--1.00-1.00------------------------------------------------------------------------------------------
........TACTTGTGTTAAACTCTATAGGTGTA.................................................................................................................................2613.003.00---1.00---1.00----------------------------------1.00------------------------------------------------------------
..................................................ATTTTGATAGGAACCCCGCCTGA..........................................................................................2313.003.001.00-------1.00----------------------------1.00-----------------------------------------------------------------
....................................................................................................................................ATTTTTTGATTAGGAATGAACCTCAGC....2713.003.00------------1.00-------------------1.00-------------------------------------------------------1.00--------------
..............TGTTAAACTCTATAGGTGTAAAGGGAA..........................................................................................................................2713.003.00-------1.00-----1.00---------------------------1.00-------------------------------------------------------------
............................................................................TTTTTGGTTTGTTTCAGGCAGGGTCTTC...........................................................2813.003.00-------1.00----------------------2.00------------------------------------------------------------------------
..........................TAGGTGTAAAGGGAATCACTGCGGATTT.............................................................................................................2812.002.00----------2.00--------------------------------------------------------------------------------------------
.........................................................................................................................TACTTGGTAGCATTTTTTGATTAGGAA...............2712.002.00-------1.00-----1.00-----------------------------------------------------------------------------------------
......................................................................................GTTTCAGGCAGGGTCTTC...........................................................1812.002.00------------------------------------2.00------------------------------------------------------------------
.........................................................TAGGAACCCCGCCTGATGCTTTTTGG................................................................................2612.002.00----------2.00--------------------------------------------------------------------------------------------
.................................................................................................................................AGCATTTTTTGATTAGGAAT..............2012.002.00------------------------------------2.00------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTGc..........................................................................................22C2.003.001.00-----------------1.00------------------------------------------------------------------------------------
......................TCTATAGGTGTAAAGGc............................................................................................................................17C2.000.00-----------------------------------------------------2.00-------------------------------------------------
..........................................................................................CAGGCAGGGTCTTCATATCGAGA..................................................2312.002.00-------------------------------------------------------------2.00-----------------------------------------
.........................ATAGGTGTAAAGGGAATCACTGC...................................................................................................................2312.002.00------------------------2.00------------------------------------------------------------------------------
......................................................................................................................TTTTACTTGGTAGCATTTTTTGATTA...................2612.002.00------1.00----------------------------1.00-------------------------------------------------------------------
.......................CTATAGGTGTAAAGGcagt.........................................................................................................................19CAGT2.000.00-----------1.00-----------1.00-------------------------------------------------------------------------------
................................................................................TGGTTTGTTTCAGGCAGGGTCTTCAT.........................................................2612.002.00-------1.00---------------------------------1.00-------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATC......................................................2112.002.001.00-------------------------------------------------------1.00----------------------------------------------
..........................TAGGTGTAAAGGGAATCACTGCGGATT..............................................................................................................2712.002.00---1.00--1.00------------------------------------------------------------------------------------------------
................................................................................................................................TAGCATTTTTTGATTAGGAATGAACCTC.......2812.002.00-------1.00----------1.00------------------------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCT............................................................................................2012.002.00--1.00-------------------------------------------1.00--------------------------------------------------------
........................................................................................................................TTACTTGGTAGCATTTTTTGATTAGGAA...............2812.002.00-------1.00---------------------------------------------------------------------------------1.00-------------
............................................................................................GGCAGGGTCTTCATAgcg.....................................................18GCG1.000.00----------------1.00--------------------------------------------------------------------------------------
...........................................................................................................................................GATTAGGAATGAACCTCAGCCT..2211.001.00------------------------------------------------------------------1.00------------------------------------
..............................TGTAAAGGGAATCACTGCGGATTTTGt..........................................................................................................27T1.000.00------1.00------------------------------------------------------------------------------------------------
.................................AAAGGGAATCACTGCGGATTTT............................................................................................................2211.001.00-----------1.00-------------------------------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGATGC.......................................................................................2411.001.00----------------------------------------1.00--------------------------------------------------------------
................TTAAACTCTATAGGTGTAAAGGG............................................................................................................................2311.001.00---------------------------------------------------------------------------1.00---------------------------
..........................................................................................................ATCGAGAAGCTCTTTTACTTGGT..................................2311.001.00-----------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................AGCATTTTTTGATTAGGAATGA............2211.001.00-------------------1.00-----------------------------------------------------------------------------------
.........ACTTGTGTTAAACTCTATAGGT....................................................................................................................................2211.001.00-----------1.00-------------------------------------------------------------------------------------------
.............................................................................TTTTGGTTTGTTTCAGGCAGGGTCTT............................................................2611.001.00----------------------------------------------------------------------------1.00--------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAttt.................................................26TTT1.0030.001.00------------------------------------------------------------------------------------------------------
.......................................................................................................CATATCGAGAAGCTCTTTTACTTGGTA.................................2711.001.00-----------------------------------1.00-------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTt...........................................................................................21T1.002.00--------------------1.00----------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATAa.......................................................20A1.000.00----1.00--------------------------------------------------------------------------------------------------
...........................................................................................AGGCAGGGTCTTCATATCGAGta.................................................23TA1.000.00------------------------1.00------------------------------------------------------------------------------
...........................AGGTGTAAAGGGAATCACT.....................................................................................................................1911.001.00-----------1.00-------------------------------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGATGt.......................................................................................24T1.000.001.00------------------------------------------------------------------------------------------------------
........................................ATCACTGCGGATTTTGATA........................................................................................................1911.001.00--------------------------------------------------------------------------------1.00----------------------
..........................TAGGTGTAAAGGGAATCACTGCGGA................................................................................................................2511.001.00------------1.00------------------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCaa....................................................23AA1.002.001.00------------------------------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAGtaa................................................27TAA1.006.00--------------------------------------1.00----------------------------------------------------------------
........................................................ATAGGAACCCCGCCTGATGCT......................................................................................2111.001.00--------------------------1.00----------------------------------------------------------------------------
.................................................................................................................................AGCATTTTTTGATTAGGAATGAACCTC.......2711.001.00------1.00------------------------------------------------------------------------------------------------
......................................................TGATAGGAACCCCGCCTGAT.........................................................................................2011.001.00---------1.00---------------------------------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTa...........................................................................................21A1.002.00----------------------------1.00--------------------------------------------------------------------------
.....................................................TTGATAGGAACCCCGCCTGgt.........................................................................................21GT1.001.00-1.00-----------------------------------------------------------------------------------------------------
.......................................................GATAGGAACCCCGCCTGATGC.......................................................................................2111.001.00------------------1.00------------------------------------------------------------------------------------
.................TAAACTCTATAGGTGTAAAGGGAATC........................................................................................................................2611.001.00----------1.00--------------------------------------------------------------------------------------------
..............TGTTAAACTCTATAGGTGTA.................................................................................................................................2011.001.00--------------------------------------------------------1.00----------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAGtat................................................27TAT1.006.00-----------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................TGATTAGGAATGAACCTCAG.....2011.001.00-------------------------------------------1.00-----------------------------------------------------------
......................................................TGATAGGAACCCCGCCTGATGCTTTT...................................................................................2611.001.00----------1.00--------------------------------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTGAgt........................................................................................24GT1.00125.00-------------------------1.00-----------------------------------------------------------------------------
........................................................................................................................................TTTGATTAGGAATGAACCTCAGCCTT.2611.001.00---1.00---------------------------------------------------------------------------------------------------
.................................AAAGGGAATCACTGCGGAT...............................................................................................................1911.001.00-----------------------1.00-------------------------------------------------------------------------------
.........................................................................................TCAGGCAGGGTCTTCATATCG.....................................................2111.001.001.00------------------------------------------------------------------------------------------------------
...........................AGGTGTAAAGGGAATCACTGCGGATTTT............................................................................................................2811.001.00------1.00------------------------------------------------------------------------------------------------
.................................AAAGGGAATCACTGCGGA................................................................................................................1811.001.00---------------------1.00---------------------------------------------------------------------------------
..........................................................................................................................ACTTGGTAGCATTTTTTGATT....................2111.001.00-----------------------1.00-------------------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTtat.........................................................................................23TAT1.002.00-1.00-----------------------------------------------------------------------------------------------------
..................AAACTCTATAGGTGTAAAGGGAATCACTGC...................................................................................................................3011.001.00-------------1.00-----------------------------------------------------------------------------------------
......................TCTATAGGTGTAAAGGGAATCACTGCG..................................................................................................................2711.001.00----------1.00--------------------------------------------------------------------------------------------
.......................CTATAGGTGTAAAGGcag..........................................................................................................................18CAG1.000.00-----------1.00-------------------------------------------------------------------------------------------
........................................................................................................................TTACTTGGTAGCATTTTTTGATTAGGA................2711.001.00-------1.00-----------------------------------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGAag........................................................................................23AG1.0077.001.00------------------------------------------------------------------------------------------------------
..............TGTTAAACTCTATAGGTGTAAAGGGAATCA.......................................................................................................................3011.001.00-------------1.00-----------------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCt.....................................................22T1.002.00---------------------------1.00---------------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGAaa........................................................................................23AA1.0077.00--------1.00----------------------------------------------------------------------------------------------
.....................................................................................................TTCATATCGAGAAGCTCTTTTACTTGGT..................................2811.001.00---1.00---------------------------------------------------------------------------------------------------
.........................................................................................................TATCGAGAAGCTCTTTTACTTGGTAGCA..............................2811.001.00-------1.00-----------------------------------------------------------------------------------------------
.........................ATAGGTGTAAAGGGAATCA.......................................................................................................................1911.001.00------------------------1.00------------------------------------------------------------------------------
............TGTGTTAAACTCTATAGGTGTAAAGGG............................................................................................................................2711.001.00------------1.00------------------------------------------------------------------------------------------
..................................................ATTTTGATAGGAACCCCGCC.............................................................................................2011.001.00---------------------------------------------------------------------------------------------1.00---------
...................................................TTTTGATAGGAACCCCGCCTGAat........................................................................................24AT1.00125.001.00------------------------------------------------------------------------------------------------------
......................................................................................................TCATATCGAGAAGCTCTTTTACTTGG...................................2611.001.00------1.00------------------------------------------------------------------------------------------------
............................................................................................................................TTGGTAGCATTTTTTGATTAGGAATGt............27T1.001.00------------------1.00------------------------------------------------------------------------------------
.......................................................................................................................TTTACTTGGTAGCATTTTTTGATTAGGA................2811.001.00------------------------------1.00------------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGATaa.......................................................................................24AA1.0044.001.00------------------------------------------------------------------------------------------------------
..............TGTTAAACTCTATAGGTGTAAAagga...........................................................................................................................26AGGA1.000.00----------1.00--------------------------------------------------------------------------------------------
..............................................................................................................................GGTAGCATTTTTTGATTAGaaat..............23AAAT1.000.00---------------------1.00---------------------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTG...........................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------
.....................................................TTGATAGGAACCCCGCCTGATGt.......................................................................................23T1.000.00----------------------------------------------------------------1.00--------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCa.....................................................22A1.002.00---------------------------------------------------1.00---------------------------------------------------
...................................AGGGAATCACTGCGGATTTTGA..........................................................................................................2211.001.00----------------------------------------------------------------------------------------------1.00--------
....................................................TTTGATAGGAACCCCGCCTGATt........................................................................................23T1.0044.00----------------1.00--------------------------------------------------------------------------------------
.....................................................................................................TTCATATCGAGAAGCTCTTTTACTTG....................................2611.001.00---1.00---------------------------------------------------------------------------------------------------
......................................................TGATAGGAACCCCGCCTGATGCTTTTT..................................................................................2711.001.00------------------------------------------1.00------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGAat........................................................................................23AT1.0077.00---------------------------------1.00---------------------------------------------------------------------
.....................................................TTGATAGGAACCCCGCCT............................................................................................1811.001.00------------------------------------------------------------------------------------------------1.00------
...................................................TTTTGATAGGAACCCCGCCTGttt........................................................................................24TTT1.003.001.00------------------------------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCttt...................................................24TTT1.002.00---------------------------------------------------1.00---------------------------------------------------
...............GTTAAACTCTATAGGTGT..................................................................................................................................1811.001.00---------------------1.00---------------------------------------------------------------------------------
..............TGTTAAACTCTATAGGTGTAAAGGGg...........................................................................................................................26G1.000.00---1.00---------------------------------------------------------------------------------------------------
....................................................TTTGATAGGAACCCCGCCTGg..........................................................................................21G1.001.001.00------------------------------------------------------------------------------------------------------
...................................................TTTTGATAGGAACCCCGCCTGATt........................................................................................24T1.0027.00-----------------1.00-------------------------------------------------------------------------------------
.........................................................................................TCAGGCAGGGTCTTCATATCGAGAt.................................................25T1.000.001.00------------------------------------------------------------------------------------------------------
........................TATAGGTGTAAAGGGAATCACTGCGGA................................................................................................................2711.001.00-----------------------------------------1.00-------------------------------------------------------------
......................................................................TGATGCTTTTTGGTTTGTTTCAGGCAG..................................................................2711.001.00---1.00---------------------------------------------------------------------------------------------------
......................................................................................GTTTCAGGCAGGGTCTTCATATCGAGA..................................................2711.001.00------1.00------------------------------------------------------------------------------------------------
.........................................................................................TCAGGCAGGGTCTTCATATCGAGt..................................................24T1.000.00-----------------------------------------------1.00-------------------------------------------------------
......................TCTATAGGTGTAAAGGGAATCACcga...................................................................................................................26CGA1.000.00---1.00---------------------------------------------------------------------------------------------------
..........................TAGGTGTAAAGGGAATCACTGCGGttt..............................................................................................................27TTT1.000.00------1.00------------------------------------------------------------------------------------------------
.....................................................TTGATAGGAACCCCGCCTGATGa.......................................................................................23A1.000.00---------------------------------------------------------------1.00---------------------------------------
...................................................TTTTGATAGGAACCCCGCCTGg..........................................................................................22G1.003.00--------1.00----------------------------------------------------------------------------------------------
.....................................................................................................................................TTTTTTGATTAGGAATGAACCTCAGCCTT.2911.001.00-----------------------------------1.00-------------------------------------------------------------------
.......................................................................................TTTCAGGCAGGGTCTTCATATCGAGAA.................................................2711.001.00----------1.00--------------------------------------------------------------------------------------------
......................................GAATCACTGCGGATTTTGA..........................................................................................................1911.001.00-------------------------------------------------------------------1.00-----------------------------------
........................................................................................................................TTACTTGGTAGCATTTTTT........................1911.001.00-----------1.00-------------------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAtt..................................................25TT1.0030.00-1.00-----------------------------------------------------------------------------------------------------
........................................................................ATGCTTTTTGGTTTGTTTCAGGCAGG.................................................................2611.001.00---1.00---------------------------------------------------------------------------------------------------
............................................................................................................................TTGGTAGCATTTTTTGATTAGGAATG.............2611.001.00---1.00---------------------------------------------------------------------------------------------------
.......................................................GATAGGAACCCCGCCTGATGCTT.....................................................................................2311.001.00-----------------------------------------------------------------------1.00-------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAGtt.................................................26TT1.006.001.00------------------------------------------------------------------------------------------------------
.........................................................................................................................TACTTGGTAGCATTTTTTGATTAGt.................25T1.000.00---1.00---------------------------------------------------------------------------------------------------
..............TGTTAAACTCTATAGGTGTAAAGcga...........................................................................................................................26CGA1.000.00----------1.00--------------------------------------------------------------------------------------------
...............................................................................TTGGTTTGTTTCAGGCAGGGTCTTC...........................................................2511.001.00---1.00---------------------------------------------------------------------------------------------------
..............TGTTAAACTCTATAGGTGTAAAGGGAATC........................................................................................................................2911.001.00------1.00------------------------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCATATCGAGAt.................................................26T1.009.001.00------------------------------------------------------------------------------------------------------
.....................................................TTGATAGGAACCCCGCCTG...........................................................................................1911.001.00--------------1.00----------------------------------------------------------------------------------------
.........................................................................................TCAGGCAGGGTCTTCATATCGA....................................................2211.001.00------------------------------------------------------------------------------1.00------------------------
............................................CTGCGGATTTTGATAGt......................................................................................................17T1.000.00--------------------------------------------------------------------------1.00----------------------------
.........................................................................................................TATCGAGAAGCTCTTTTACTTGGTA.................................2511.001.00------1.00------------------------------------------------------------------------------------------------
...............................................................................TTGGTTTGTTTCAGGCAGGGTCT.............................................................2320.500.50-------------0.50-----------------------------------------------------------------------------------------
........................................................................................TTCAGGCAGGGTCTTCA..........................................................1720.500.50-----------------0.50-------------------------------------------------------------------------------------
..............TGTTAAACTCTATAGG.....................................................................................................................................1640.250.25------------0.25------------------------------------------------------------------------------------------
GAACACATTACTTGTGTTAAACTCTATAGGTGTAAAGGGAATCACTGCGGATTTTGATAGGAACCCCGCCTGATGCTTTTTGGTTTGTTTCAGGCAGGGTCTTCATATCGAGAAGCTCTTTTACTTGGTAGCATTTTTTGATTAGGAATGAACCTCAGCCTTT
...................................................(((((((((((((((.((((((.((..........)).)))))).)))).))).))))))))..................................................
..................................................51............................................................113................................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR073955(GSM629281)
total RNA. (blood)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR073954(GSM629280)
total RNA. (blood)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		GSM416732(GSM416732)
MEF. (cell line)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206941(GSM723282)
other. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (testes)		SRR077865(GSM637802)
18-30 nt small RNAs. (liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR206942(GSM723283)
other. (brain)		GSM475281(GSM475281)
total RNA. (testes)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR037926(GSM510464)
e9p5_rep4. (embryo)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
.........................................................................................................ctTCGAGAAGCTCTTTTA........................................ 18ct2.000.00-----------------------------------1.00-----------------------------------------------1.00-------------------
............................................................................................................tggGAAGCTCTTTTACTT..................................... 18tgg1.000.00---------------1.00---------------------------------------------------------------------------------------
..................................................................................................................GCTCTTTTACTTGGTAG................................ 1711.001.00--------------------------------------------------------------------------------------------------1.00----