ID: mmu-mir-5103
chr1:34489916-34490094 -
Display Libraries
(9)
AGO2.ip
(10)
B-CELL
(21)
BRAIN
(4)
CELL-LINE
(2)
DGCR8.mut
(17)
EMBRYO
(6)
ESC
(5)
FIBROBLAST
(7)
LIVER
(4)
LYMPH
(23)
OTHER
(8)
OTHER.mut
(2)
PIWI.ip
(1)
PIWI.mut
(1)
SKIN
(9)
SPLEEN
(18)
TESTES
(4)
THYMUS
(2)
TOTAL-RNA
(1)
UTERUS
Showing top 138 reads
TCTGAGCTCGGACTTGGATAAAGACTCTTTGCTTTTGCATACGAGTTCGACTTCTGGTGGTCTTTGGGGACCCTAGGATCTGGGCATAACATTTGGGGGCTCATCCGGGATCCCCTGAGGCCCCCAGGACCCCCGAGCCGTTGAGTCAGAACCCGGTGGGTAAGTGTCTGAATGTTTGT
..................................................((.((((((.((((((((..(((..(((((.............))))))))))).))))).)))))).))......................................................
.......................................................56.......................................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR059771(GSM562833)
CD4_control. (spleen)
mjTestesWT4()
Testes Data. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
mjTestesWT1()
Testes Data. (testes)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
mjTestesWT2()
Testes Data. (testes)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR206939(GSM723280)
other. (brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR037927(GSM510465)
e7p5_rep1. (embryo)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR037922(GSM510460)
e12p5_rep4. (embryo)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
GSM475281(GSM475281)
total RNA. (testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR206941(GSM723282)
other. (brain)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR060845(GSM561991)
total RNA. (brain)
....................................................................................................TCATCCGGGATCCCCTGAGGC..........................................................211112.00112.0015.007.00-6.007.009.005.002.004.006.005.003.00---1.001.00----2.001.001.001.00-2.00-2.001.005.00-1.00---2.002.00-1.00-2.00-2.001.00-----1.00--1.003.00-------1.00-1.00--2.00---2.002.001.00---------------------------------------1.00------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCat........................................................23AT48.00112.006.00-10.005.004.00--3.00-1.001.00---1.00-1.001.00------1.00--1.00---1.001.002.00----------2.00-------2.001.00------1.00----------------1.00--------------------------------------1.00--------1.00------
....................................................................................................TCATCCGGGATCCCCTGAGGCa.........................................................22A44.00112.004.0010.009.001.002.00--1.001.00--2.00--3.00-----2.001.00-1.00---1.00---------------------------------1.00-----------------2.00-----1.00----1.00------------1.00----------------------------
....................................................................................................TCATCCGGGATCCCCTGAGG...........................................................20132.0032.00-3.00-1.001.00-1.002.001.00--1.00----3.00-1.00-------1.00-2.001.00--1.001.00------3.00-1.00--1.00----1.00----2.001.00--------------------1.00---------------1.00---1.00----------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCt.........................................................22T28.00112.001.001.00---1.002.003.00-1.00-2.00--1.00--2.001.00--1.001.001.00----1.00-1.001.00---1.00-1.00---------1.00---1.00-----------------------1.002.00-------------------------------------------------------
.........................................................................TAGGATCTGGGCATAACATTTGGGG.................................................................................25122.0022.00-------------7.00--------2.00--6.00--------1.00---2.00---------1.00--------2.00-----1.00--------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCaa........................................................23AA16.00112.002.00--2.001.00----1.00----2.00---1.00----1.00-----------------------------------3.00----------------------1.00-1.00------------------------1.00----------------------
....................................................................................................TCATCCGGGATCCCCTGAG............................................................19113.0013.00-----------1.00----2.00-1.00---------1.00------1.00------3.00------------1.00--------------------------1.00-----1.00---------------------------------1.00---------
....................................................................................................TCATCCGGGATCCCCTGAGGt..........................................................21T9.0032.00----------2.00------1.002.00-1.00---1.00--------1.00---------------------------------------------------------------------------------------1.00----------
.....................................................................................................CATCCGGGATCCCCTGAGG...........................................................1919.009.00------------7.00---------------------------------2.00-------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCtat.......................................................24TAT9.00112.00------1.00----------1.00---------1.00---1.00-1.00------------------------------1.00---1.001.00----------------------------1.00---------------------------------
.........................................................................TAGGATCTGGGCATAACATTTGGGGGC...............................................................................2718.008.00-------------4.00-1.00------------------2.00----------------------1.00--------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCtt........................................................23TT7.00112.00-----1.00----1.00---------2.00--1.00---1.00-----------1.00--------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCta........................................................23TA7.00112.002.00------3.00-----------------------------------------------------1.00---------------------------------------1.00------------------------------
.........................................................................TAGGATCTGGGCATAACATTTGGGGG................................................................................2617.007.00---------------3.00---1.00--1.00---------------2.00---------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCaat.......................................................24AAT7.00112.00--------1.001.00-------1.00-----1.001.00--------------------------------------------1.00--------------------------------------------------1.00-----------
....................................................................................................TCATCCGGGATCCCCTGAGGCC.........................................................2216.006.001.00---------3.00---1.00----------------------------1.00----------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCaga.......................................................24AGA6.00112.00--4.002.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGA.............................................................1816.006.00--------1.00----------3.00------------------------------------1.00---1.00-----------------------------------------------------------------------
.....................................................................................................CATCCGGGATCCCCTGAGGC..........................................................2015.005.00------------4.00------------------------------------------------------------------------------------------------------1.00----------------
....................................................................................................TCATCCGGGATCCCCTGAGGa..........................................................21A5.0032.00----1.002.00--------------------1.00--------------------------------------------------------------1.00------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGt...........................................................20T5.0013.00------3.00--------------1.00----------1.00---------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCttt.......................................................24TTT4.00112.00-----2.00--1.00--1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCatt.......................................................24ATT4.00112.00----1.00------1.00--1.00--1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCaaa.......................................................24AAA4.00112.001.003.00----------------------------------------------------------------------------------------------------------------------------------
......CTCGGACTTGGATAAAGA...........................................................................................................................................................1814.004.00---1.00---------------1.00-------------------------1.00--------------------------------------------------------------------1.00-----------------
...GAGCTCGGACTTGGATAAAGA...........................................................................................................................................................2113.003.00-----------------------------------------1.00---------1.00------1.00-------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCag........................................................23AG3.00112.00----------------------------------------------------1.00----------------------1.00-----------------------------------------1.00--------------
....................................................................................................TCATCCGGGATCCCCTGAGGaat........................................................23AAT3.0032.00--------1.00-----------------------------------------1.00-----------1.00---------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGttt........................................................23TTT3.0032.00----------------2.00----------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCCt........................................................23T2.006.00-------1.00---------------------------------------------1.00------------------------------------------------------------------------------
.......................................................................................AACATTTGGGGGCTCATCCGGG......................................................................2212.002.00------2.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGa...........................................................20A2.0013.00---------1.00-------------------------------1.00------------------------------------------------------------------------------------------
............................................................TCTTTGGGGACCCTAGGATCT..................................................................................................2122.002.00-----------------------0.50-------0.50--------------------------0.50---------------------------------------------------------------------0.50---
....................................................................................................TCATCCGGGATCCCCTGAGGCata.......................................................24ATA2.00112.00---1.001.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................CATCCGGGATCCCCTGAG............................................................1812.002.00----------------------------------------------1.00-----------------------------------------------------------------------1.00-------------
....................................................................................................TCATCCGGGATCCCCTGAGGCg.........................................................22G2.00112.00--------1.00------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................CTCATCCGGGATCCCCTGAGG...........................................................2112.002.00--------------------------------1.00-------1.00-------------------------------------------------------------------------------------------
.....GCTCGGACTTGGATAAAGACTCTTTG....................................................................................................................................................2612.002.00----------------------------------2.00-------------------------------------------------------------------------------------------------
.............................................................CTTTGGGGACCCTAGGATCTGGGC..............................................................................................2421.501.50--0.50---------------------------------0.50---------------------------------------------------------------------------------------------0.50-
.............................................................CTTTGGGGACCCTAGGATCT..................................................................................................2021.501.50-----------------------------------0.50---------------------------------------------------------------------0.50---------------------0.50----
.............................................................CTTTGGGGACCCTAGGATCTGGG...............................................................................................2321.501.50--------------0.50--------------------0.50------------------------------------------------------------------------------------------0.50-----
.............................................................CTTTGGGGACCCTAGGATCTG.................................................................................................2121.001.00-----------------------------------0.50---------------------------------------------------------------------0.50--------------------------
....................................................................................................TCATCCGGGATCCCCTGcggc..........................................................21CGGC1.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------
.......................................TACGAGTTCGACTTCTGGT.........................................................................................................................1911.001.00----------------------------------------------------------------------1.00-------------------------------------------------------------
.............TTGGATAAAGACTCTTTGCTTTTGCATA..........................................................................................................................................2811.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCagat......................................................25AGAT1.00112.00-----------------------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................................GGGTAAGTGTCTGAATGTTT..2011.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCttat......................................................25TTAT1.00112.00--------------1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGtcta........................................................23TCTA1.0013.00------------------------------------1.00-----------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGtaa........................................................23TAA1.0032.00--------1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCagt.......................................................24AGT1.00112.00------1.00-----------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGGGGGCTCATCCGGGATttga................................................................22TTGA1.000.00----------------------------------------------------------------------------------------------------------1.00-------------------------
.......TCGGACTTGGATAAAGAC..........................................................................................................................................................1811.001.00----------------------------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGtc..........................................................21TC1.0013.00-----------------1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCtatt......................................................25TATT1.00112.00------------------------1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................TCCGGGATCCCCTGAGGCttt.......................................................21TTT1.000.00---------------------------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................CATCCGGGATCCCCTGAGGCt.........................................................21T1.005.00--------------------------------------------------------------------------------------------------------1.00---------------------------
....................................................................................................TCATCCGGGATCCCCTG..............................................................1711.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGATCTGGGCATAACATTTGGG..................................................................................2411.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
.....GCTCGGACTTGGATAAAGACTCTTT.....................................................................................................................................................2511.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------
.................................................ACTTCTGGTGGTCTTTGGGGA.............................................................................................................2111.001.00----------------------------------------------------------1.00-------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGaaa........................................................23AAA1.0032.00--------------------------------------------------------------------1.00---------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCattt......................................................25ATTT1.00112.00-----------------------------------------------1.00------------------------------------------------------------------------------------
.....................................................................................................CATCCGGGATCCCCTGAGt...........................................................19T1.002.00------------1.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGAGTCAGAACCCGGTGGGTAAGT..............2411.001.00------------------1.00-----------------------------------------------------------------------------------------------------------------
....AGCTCGGACTTGGATAAAGA...........................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................CTCATCCGGGATCCCCTGAGGC..........................................................2211.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................CTCATCCGGGATCCCCTGAGGCat........................................................24AT1.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------
.......................................TACGAGTTCGACTTCTGGTGGTCTTTGG................................................................................................................2811.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGtca.........................................................22TCA1.0013.00-------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCCa........................................................23A1.006.00-----------------------------------------------------------------------------------------------------------------------1.00------------
.........................................................................TAGGATCTGGGCATAACATTTGGGGGCTCAa...........................................................................31A1.000.00----------------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCtaaa......................................................25TAAA1.00112.00--------------------------------------------------------1.00---------------------------------------------------------------------------
.CTGAGCTCGGACTTGGATAAAGACTC........................................................................................................................................................2611.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------
....AGCTCGGACTTGGATctt.............................................................................................................................................................18CTT1.000.00---------------------------------------------------------------------------------1.00--------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGttaa.......................................................24TTAA1.0032.00--------------------------------------------------------------------------1.00---------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGta.........................................................22TA1.0032.00-----------------------------1.00------------------------------------------------------------------------------------------------------
.CTGAGCTCGGACTTGGcatc..............................................................................................................................................................20CATC1.000.00------------------------------------------------------------------------------------------------------1.00-----------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGaa.........................................................22AA1.0032.00--------1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGaaa.........................................................22AAA1.0013.00---------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................CTCATCCGGGATCCCCTGAGGtt.........................................................23TT1.002.00---------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCaaat......................................................25AAAT1.00112.00-------------------------------------------------------------------------------------------1.00----------------------------------------
......CTCGGACTTGGATAAAGAC..........................................................................................................................................................1911.001.00--------------------------------------------------------------------------------------1.00---------------------------------------------
.............................................................................................TGGGGGCTCATCCGGaat....................................................................18AAT1.000.00-------------------------------------------------1.00----------------------------------------------------------------------------------
.....GCTCGGACTTGGATAAAGA...........................................................................................................................................................1911.001.00-----------------------------------------------1.00------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCac........................................................23AC1.00112.00------1.00-----------------------------------------------------------------------------------------------------------------------------
....AGCTCGGACTTGGATAAAGAC..........................................................................................................................................................2111.001.00------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................TCATCCGGGATCCCCTGAGGCtaa.......................................................24TAA1.00112.00--------------------------------------------------------------------------1.00---------------------------------------------------------
............................................................TCTTTGGGGACCCTAGGATCTG.................................................................................................2220.500.50---------------------------------------------0.50--------------------------------------------------------------------------------------
..............................................................TTTGGGGACCCTAGGATCTGGGC..............................................................................................2320.500.50----0.50-------------------------------------------------------------------------------------------------------------------------------
............................................................TCTTTGGGGACCCTAGGATCTGG................................................................................................2320.500.50-------------------------------------0.50----------------------------------------------------------------------------------------------
.............................................................CTTTGGGGACCCTAGGATCTtg................................................................................................22TG0.501.50-----------------------0.50------------------------------------------------------------------------------------------------------------
.............................................................CTTTGGGGACCCTAGGATCTGGGa..............................................................................................24A0.501.50----------------------------------------------------------0.50-------------------------------------------------------------------------
TCTGAGCTCGGACTTGGATAAAGACTCTTTGCTTTTGCATACGAGTTCGACTTCTGGTGGTCTTTGGGGACCCTAGGATCTGGGCATAACATTTGGGGGCTCATCCGGGATCCCCTGAGGCCCCCAGGACCCCCGAGCCGTTGAGTCAGAACCCGGTGGGTAAGTGTCTGAATGTTTGT
..................................................((.((((((.((((((((..(((..(((((.............))))))))))).))))).)))))).))......................................................
.......................................................56.......................................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR059771(GSM562833)
CD4_control. (spleen)
mjTestesWT4()
Testes Data. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
mjTestesWT1()
Testes Data. (testes)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
mjTestesWT2()
Testes Data. (testes)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR206939(GSM723280)
other. (brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR037927(GSM510465)
e7p5_rep1. (embryo)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR037922(GSM510460)
e12p5_rep4. (embryo)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
GSM475281(GSM475281)
total RNA. (testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR206941(GSM723282)
other. (brain)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR060845(GSM561991)
total RNA. (brain)
.............................................................................................tgtGGGCTCATCCGGGAT.................................................................... 18tgt5.000.00-------------------------------1.00-------------------1.00----------------------------1.00-------------1.00-----------------1.00-------------------
.............................................................................................tgaGGGCTCATCCGGGAT.................................................................... 18tga4.000.00-------------------------------------------------1.00----------------1.00----------------------------------------1.001.00-----------------------
.............................................................................................ttGGGGCTCATCCGGGAT.................................................................... 18tt3.000.00-------------------------------1.00-------------1.00----------------------------------1.00---------------------------------------------------
.............................................................................................cGGGGGCTCATCCGGGAT.................................................................... 18c2.000.00-----------1.00---------------1.00--------------------------------------------------------------------------------------------------------
...........................TTTGCTTTTGCATACGAGTTCGACTTC............................................................................................................................. 2712.002.00-------------------2.00----------------------------------------------------------------------------------------------------------------
.................................acgGCATACGAGTTCGAC................................................................................................................................ 18acg2.000.00--------------------------1.00----------------1.00----------------------------------------------------------------------------------------
.......................................................................................................................................AGCCGTTGAGTCAGAACCCGGTG..................... 2312.002.00-----------------------------------------------------------------2.00------------------------------------------------------------------
..............................GCTTTTGCATACGAGTTCGAC................................................................................................................................ 2112.002.00---2.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................gGGGGGCTCATCCGGGAT.................................................................... 18g1.000.00------------------------------------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................GCCGTTGAGTCAGAACCCGGTGGGTA................. 2611.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................ACCCCCGAGCCGTTGAGTCA............................... 2011.001.00------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................CCCCTGAGGCCCCCAGGACCCCCGAG.......................................... 2611.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................GGGTAAGTGTCTGAATGTTTG. 2111.001.00-----------------------------------------------------------------------------------------------1.00------------------------------------
....................................................................................................................................CCGAGCCGTTGAGTCAGA............................. 1811.001.00---------------------------------------------------------------------------------------------------------------1.00--------------------
...GAGCTCGGACTTGGATAAAGACTCT....................................................................................................................................................... 2511.001.00--------------------------------------------------------------------------------------------------------------1.00---------------------
......................................................................................................................................GAGCCGTTGAGTCAGAACCCGGTG..................... 2411.001.00-------------------------------------------------------------------------1.00----------------------------------------------------------
.............................................................................................tgcGGGCTCATCCGGGAT.................................................................... 18tgc1.000.00------------------------------------------------------------------1.00-----------------------------------------------------------------
............................................................................................................................................................TGGGTAAGTGTCTGAATGTT... 2011.001.00--------------------------1.00---------------------------------------------------------------------------------------------------------
.....................................CATACGAGTTCGACTTCTGGTGGTCTT................................................................................................................... 2711.001.00-----------------------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................tggtGGCTCATCCGGGATC................................................................... 19tggt1.000.00--------------------1.00---------------------------------------------------------------------------------------------------------------
..........................CTTTGCTTTTGCATACGAGTTCGACTTC............................................................................................................................. 2811.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------
..................gggAGACTCTTTGCTTTT............................................................................................................................................... 18ggg1.000.00---------------------------------------------------------------------------------------1.00--------------------------------------------
....................accgCTCTTTGCTTTTGCA............................................................................................................................................ 19accg1.000.00------------------------------------------------------------------------------1.00-----------------------------------------------------
.........................................................................................ctcaTGGGGGCTCATCCGGGA..................................................................... 21ctca1.000.00---------------------------------------------------------------------------------1.00--------------------------------------------------
.............................TGCTTTTGCATACGAGTTCGACTTCTG........................................................................................................................... 2711.001.00---------------------------------------------------------------1.00--------------------------------------------------------------------
............................................................................................agaGGGGCTCATCCGGGA..................................................................... 18aga1.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................gCAGGACCCCCGAGCCGT...................................... 18g1.000.00------------------------------------------------------------------------------1.00-----------------------------------------------------
......................................................................................................ccCCGGGATCCCCTGAGGC.......................................................... 19cc1.000.00------------------------------------------------------------------------------------------------1.00-----------------------------------
......................................................................................................................tttCCCCAGGACCCCCGA........................................... 18ttt1.000.00-----------------------------1.00------------------------------------------------------------------------------------------------------
..........................................................................................aaaTGGGGGCTCATCCGGGAT.................................................................... 21aaa1.000.00--------------------1.00---------------------------------------------------------------------------------------------------------------
....................agcgCTCTTTGCTTTTGCA............................................................................................................................................ 19agcg1.000.00---------------------------------------------------------------------------------------------------------------------------1.00--------
.............................................................................................taaGGGCTCATCCGGGAT.................................................................... 18taa1.000.00---------------------------------------------------------------------------------------------------1.00--------------------------------
...........................................................................................taTGGGGGCTCATCCGGGA..................................................................... 19ta1.000.00--------------------------------------------------------------------------------------------1.00---------------------------------------
.................................................................................................................................CCCCCGAGCCGTTGAGTCAGAAC........................... 2311.001.00----------------------------------------------------------------------------------------------------------------------------1.00-------
.............................................................................................TGGGGGCTCATCCGGGATC................................................................... 1921.001.00---------0.50-------0.50------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................AGCCGTTGAGTCAGAACCC......................... 1911.001.00---------1.00--------------------------------------------------------------------------------------------------------------------------
..............................GCTTTTGCATACGAGTTCGACTTCTGG.......................................................................................................................... 2711.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................ttcGGGGGCTCATCCGGGAT.................................................................... 20ttc1.000.00-------------------------------------------------1.00----------------------------------------------------------------------------------
........................................................................................................................................GCCGTTGAGTCAGAACCC......................... 1811.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
...........................................................................................TTTGGGGGCTCATCCGGGA..................................................................... 1940.750.75--------0.25------------------------------------------------------------------------------------------------------------------------0.50--
.........................................................................................................................................CCGTTGAGTCAGAAC........................... 1520.500.50---------------0.50--------------------------------------------------------------------------------------------------------------------
...........................................................................................TTTGGGGGCTCATCCGGGAT.................................................................... 2040.250.25-----------------------------------------------------------------------------------------------------------------------------------0.25
............................................................................................TTGGGGGCTCATCCGGGAT.................................................................... 19100.200.20-----------------------------------0.10-----------------------------------------------0.10------------------------------------------------