| (2) AGO2.ip | (1) B-CELL | (2) BRAIN | (1) CELL-LINE | (2) EMBRYO | (1) FIBROBLAST | (1) LUNG | (1) OTHER | (2) OTHER.mut | (1) PIWI.ip | (5) TESTES | (1) TOTAL-RNA |
| CAGAAATTAAAGCAGCAATCAATCACAAGGCCTACATGGGTCTGCACCAGGTCTTGTGCATGCATATATATATATGTGTGTGTGTATATATATATACATATATATACATACATACACATGTATATGTATATATACATACACACACATATATATATTCATGTATATATATATATATGTATATTCATGTATATATATGAATGTAATGAGGCCTTGTTGTCAG .....................................................................((((((((((((((((((.(((((((((((((((((............))))))))))))))))).))))))))))))))))))................................................................... .....................................................................70...................................................................................155............................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR029123(GSM416611) NIH3T3. (cell line) | SRR391851(GSM852146) gender: femalegenotype/variation: wild typeti. (embryo) | SRR042478(GSM539870) mouse lung tissue [09-002]. (lung) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR073954(GSM629280) total RNA. (blood) | SRR042450(GSM539842) mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR391853(GSM852148) gender: femalegenotype/variation: ADAR2-/-/AD. (embryo) | SRR037914(GSM510451) newborn_rep7. (total RNA) | SRR306540(GSM750583) 19-24nt. (ago2 brain) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR039183(GSM485323) shLuc.1309 (-dox). (fibroblast) | SRR306535(GSM750578) 19-24nt. (ago2 brain) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................TGTGTGTGTGTATATATcgat............................................................................................................................. | 21 | CGAT | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 0.67 | 0.67 | - | - | 0.33 | 0.33 |
| ....................................................................................................................................TACATACACACACATAagat.................................................................... | 20 | AGAT | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................ATATGTGTGTGTGTATATtatt............................................................................................................................... | 22 | TATT | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................ATACATACACACACATcaga..................................................................... | 20 | CAGA | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................ATGTATATATATATATAgcat.......................................... | 21 | GCAT | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................TGTGTGTGTGTATATATATATACATgga...................................................................................................................... | 28 | GGA | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TATATATATGTGTGTGTGTATATATttc.............................................................................................................................. | 28 | TTC | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................TATACATACATACACctac................................................................................................... | 19 | CTAC | 0.50 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| .....................................................................................................ATATACATACATACACctac................................................................................................... | 20 | CTAC | 0.50 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| CAGAAATTAAAGCAGCAATCAATCACAAGGCCTACATGGGTCTGCACCAGGTCTTGTGCATGCATATATATATATGTGTGTGTGTATATATATATACATATATATACATACATACACATGTATATGTATATATACATACACACACATATATATATTCATGTATATATATATATATGTATATTCATGTATATATATGAATGTAATGAGGCCTTGTTGTCAG .....................................................................((((((((((((((((((.(((((((((((((((((............))))))))))))))))).))))))))))))))))))................................................................... .....................................................................70...................................................................................155............................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR029123(GSM416611) NIH3T3. (cell line) | SRR391851(GSM852146) gender: femalegenotype/variation: wild typeti. (embryo) | SRR042478(GSM539870) mouse lung tissue [09-002]. (lung) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR073954(GSM629280) total RNA. (blood) | SRR042450(GSM539842) mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR391853(GSM852148) gender: femalegenotype/variation: ADAR2-/-/AD. (embryo) | SRR037914(GSM510451) newborn_rep7. (total RNA) | SRR306540(GSM750583) 19-24nt. (ago2 brain) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR039183(GSM485323) shLuc.1309 (-dox). (fibroblast) | SRR306535(GSM750578) 19-24nt. (ago2 brain) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................cacaGTCTTGTGCATGCATA.......................................................................................................................................................... | 20 | caca | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................aaagACATACACACACATATAT..................................................................... | 22 | aaag | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................aagGTGTGTATATATATATACA.......................................................................................................................... | 22 | aag | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |