ID: mmu-mir-3103
chr7:135431834-135432022 -
Display Libraries
(2)
AGO1.ip 		(17)
AGO2.ip 		(2)
AGO3.ip 		(12)
B-CELL 		(33)
BRAIN 		(8)
CELL-LINE 		(2)
DGCR8.mut 		(14)
EMBRYO 		(8)
ESC 		(4)
FIBROBLAST 		(1)
KIDNEY 		(9)
LIVER 		(4)
LYMPH 		(15)
OTHER 		(9)
OTHER.mut 		(2)
PANCREAS 		(3)
PIWI.ip 		(1)
PIWI.mut 		(6)
SKIN 		(8)
SPLEEN 		(26)
TESTES 		(4)
THYMUS 		(1)
UTERUS
Showing top 112 reads
ACCTCTTATCCCAACAGGAGCAAACTGGACTGCAATGCCAAGCAGTGGAGGTGAGAAGAGAGGAGGTATGGGGAGGAGGGAGGATCTGCTGTTAGAAAGTCTCTGGTTTGTGACCTCTAACCTCTGATCCTTCCCACAGGCTCTTTGCCGACATCCTCAACGATGTAGCCATGTTCCTAGAGATTATGG
..................................................(((((((((.(((((.((((....))))........((((...)))).....)))))..))))))))).....................................................
....................................................................69....................................................................139................................................
SizePerfect hitTotal NormPerfect NormSRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		mjTestesWT4()
Testes Data. (testes)		mjLiverWT3()
Liver Data. (liver)		mjTestesWT3()
Testes Data. (testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR206940(GSM723281)
other. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT1()
Testes Data. (testes)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR037905(GSM510441)
brain_rep2. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR206941(GSM723282)
other. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR206939(GSM723280)
other. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR060845(GSM561991)
total RNA. (brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		mjTestesWT2()
Testes Data. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042482(GSM539874)
mouse skin tissue [09-002]. (skin)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR206942(GSM723283)
other. (brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
.........................................................................AGGAGGGAGGATCTGCTGTTAGA.............................................................................................23183.0083.007.00-3.003.0010.00-3.004.001.002.002.002.004.00-1.002.00----3.002.002.001.002.00-1.001.00-1.001.00------1.00---2.00---1.00-2.00--------1.00-1.001.001.00-------------------1.00---1.00-1.00------------1.002.00-1.00--------1.00---------1.00----1.00------------1.001.00---1.00--------1.001.00
.....................................................................................................................TAACCTCTGATCCTTCCCACAG..................................................22176.0076.002.00--5.003.00--2.003.002.00-2.00--6.001.00-1.00-4.001.00-2.00----------3.00-2.002.00---3.00--2.00--1.00--2.00--3.00----4.00-2.00------------1.00------1.00---1.00---2.00----------1.00--1.00----2.00---1.00------1.00---------1.00---1.00-1.00-1.00--1.00----1.00----1.00------
.....................................................................................................................TAACCTCTGATCCTTCCCACAGt.................................................23T58.0076.001.00--1.00-2.002.00--6.00-------6.00--1.00-1.00--5.00---3.00-----3.004.00--1.00---3.001.00-2.002.00-------1.00--1.00-1.00---1.001.00--1.001.00--2.00-1.00------------------1.00---------------1.00--------------------------1.001.00-----------------
...........................................................................GAGGGAGGATCTGCTGTTAGA.............................................................................................21133.0033.006.00-1.001.00-2.003.001.001.00-2.00--1.00--1.00----1.00--1.00-1.00--1.00-----------1.002.00--1.00------------1.00--------1.00---------------------1.00-------1.00------------------1.00------------1.00-------------------------
............................................................................AGGGAGGATCTGCTGTTAGA.............................................................................................20131.0031.002.00-----4.003.00-----2.00--------1.00---1.001.00--1.00------2.00-2.00--------2.00--2.00----------1.00-1.00-----1.00---1.001.00-----1.00-----------------------------------------------------------------1.00-1.00-----
.....................................................................................................................TAACCTCTGATCCTTCCCACA...................................................21129.0029.00--5.00-----1.00-1.00---2.00-------2.00----2.00----2.002.003.00--1.00--------1.00--------1.00---------------------------------1.00------------1.00-----1.00----1.001.00---1.00------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAG..............................................................................................22128.0028.002.00--------1.001.00----1.004.001.00---------1.00--1.00--1.00-----------1.00----2.00--1.00-1.00-----1.00-1.00----------------1.001.002.00---------------1.001.00-----------1.00-1.00-----------------------------------------
...................................................................................................................TCTAACCTCTGATCCTTCCCACA...................................................23122.0022.00--6.00--1.00-----------------4.00---1.00-------1.00--1.00-1.001.00-------1.00----------------------------------------2.00-1.00----1.00----------1.00----------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAAAGT.........................................................................................24119.0019.001.0011.00-----1.00-------1.00------------------------------------------1.00-----------------------------------------------------1.00---------1.00-1.00-------1.00----------------------
...................................................................................................................TCTAACCTCTGATCCTTCCCACAG..................................................24119.0019.00-----4.00--2.00--2.00-------6.00--1.00-----------------------1.00-------1.00----1.00-1.00---------------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAAAG..........................................................................................23119.0019.00-8.00---3.00----1.00--------------------1.002.00------------1.00------------------1.00---------1.00----------------------------------------------------------------------1.00---------
............................................................................AGGGAGGATCTGCTGTTAGAAA...........................................................................................22117.0017.00-------2.00--1.00--4.00-1.00---------------2.00------2.00-----------------1.00--------------------1.00-------1.00--------1.00-----------------------------------------------1.00------------
..........................................................................GGAGGGAGGATCTGCTGTTAGA.............................................................................................22116.0016.004.00----2.00-2.00----3.00-------------1.00-----------------2.00--------------------1.00---------------------------1.00-------------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTA...............................................................................................21115.0015.00----------1.00-2.002.00----------------1.00-2.00------3.00-----1.00-----2.00----------------------------------------------------1.00--------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTA...............................................................................................18113.0013.00----------------1.00-8.00--------------------------------------------1.00---------------2.00--1.00------------------------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCCCACAGa.................................................23A12.0076.001.00-1.00-----1.00------------1.00----1.00--1.00-1.00--------------------1.00--1.001.00----------------------------------------------------1.00--------------------1.00------------------------
.....................................................................................................................TAACCTCTGATCCTTCCCAC....................................................20111.0011.00----------------------------6.00---------1.00---------------------------1.00----------------2.00--------------------1.00--------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAA............................................................................................21111.0011.00-------1.00----1.00-----------2.00-1.00----1.001.00---------1.00-----------------------------------1.00------1.00------1.00--------------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAGAAA...........................................................................................25111.0011.00-10.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCC.......................................................21110.0010.00----------------1.00-------------------------1.00-----3.00--------------------------1.00------------2.00-----1.001.00-----------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAG..............................................................................................1919.009.001.00-----2.001.001.00-------1.00--------------------------------1.00----------1.00--------------------------------------------------------------1.00-------------------------------
...............................................................................GAGGATCTGCTGTTAGAAAGT.........................................................................................2117.007.003.00-------1.00--1.00--------------------------------------------------1.00---------------------------------------------------1.00----------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCAC....................................................2417.007.00-----------1.00----1.00----1.00-3.00---1.00-------------------------------------------------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTAG..............................................................................................2017.007.001.00------------2.001.00--------------------------------------1.00------1.00----------------------------------------1.00-----------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAGt.............................................................................................23T7.0028.00-----2.00-----------------------------------------------------------1.00----2.00---------1.00---1.00----------------------------------------------------------------------
..............................................................................GGAGGATCTGCTGTTAGAAAGTC........................................................................................2316.006.00--2.00---1.00--------2.00---------------1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTAGAA............................................................................................2216.006.002.00--2.00--------------------1.00-----------------------------1.00----------------------------------------------------------------------------------------------------
...............................................................................GAGGATCTGCTGTTAGAAAG..........................................................................................2016.006.00----6.00------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................GAGGATCTGCTGTTAGAAAGTC........................................................................................2216.006.001.00-------1.00---------------1.00------------1.00-------------------------------------1.00---------------------------1.00---------------------------------------------------
...................................................................................................................TCTAACCTCTGATCCTTCCCAC....................................................2215.005.00-----1.00--------------------1.00----------1.00-------------------------1.00--------------1.00----------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCC......................................................2215.005.00---------------------1.00-------------------1.00--------------------------------------------1.00---------2.00----------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAGAAt...........................................................................................25T5.000.00--4.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTAACCTCTGATCCTTCCCACAGa.................................................25A4.0019.00-------------------------------1.00------------------------------------2.001.00-------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAAAGTC........................................................................................2514.004.00-----------2.00-------------------------------------------------------------------------------2.00---------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTAGAAA...........................................................................................2314.004.00----------1.00----------1.00---1.00-------------------------------------------------------1.00-------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTC........................................................2013.003.00-----------------------------------------------------1.00--------1.00-----------------------------------------------1.00--------------------------------------------
..........................................................................GGAGGGAGGATCTGCTGTTAG..............................................................................................2113.003.002.00---------------------------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCACAG..................................................2613.003.00---3.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAg............................................................................................21G3.0031.00------3.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTAACCTCTGATCCTTCCCACAGt.................................................25T3.0019.001.00----------------1.00-----------------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCACA...................................................2513.003.00-----------1.00-------------------------------------1.00-----------------------1.00---------------------------------------------------------------------------------
................................................................................................AAGTCTCTGGTTTGTGACCTC........................................................................2113.003.00----------------------------------------------------------------------------3.00------------------------------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAt..............................................................................................22T2.0015.00------------------------------1.00-------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTT.........................................................1912.002.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------1.00---
.........................................................................AGGAGGGAGGATCTGCTGTT................................................................................................2012.002.00----------------------------------1.00------------------1.00-----------------------------------------------------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAGAt............................................................................................24T2.0083.00-------------------------------------------------------------------1.00---1.00-----------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCAt....................................................24T2.002.00-------------------------------------------------------------------------1.00----1.00----------------------------------------------------------------------------
..................................................GTGAGAAGAGAGGAGGTAT........................................................................................................................1912.002.00-----------------------------------------------------------------------------1.00-------------------------1.00---------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCACAGt.................................................27T2.003.00------------------------------------------------------2.00----------------------------------------------------------------------------------------------------
..........................................................................GGAGGGAGGATCTGCTGTTAGAAt...........................................................................................24T2.000.00---------------------------------------------------------------------------------------------------------2.00-------------------------------------------------
......................................................................................................................AACCTCTGATCCTTCCCACAGt.................................................22T2.001.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------------------
........................CTGGACTGCAATGCCAAGCAGT...............................................................................................................................................2212.002.00--------------------2.00--------------------------------------------------------------------------------------------------------------------------------------
.............................................................................GGGAGGATCTGCTGTTAGAAAGTC........................................................................................2412.002.00---------------2.00-------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................CTAACCTCTGATCCTTCCCACA...................................................2212.002.00-----2.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCA.....................................................2312.002.00-------------------------------------------------------------1.00-----1.00---------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGt.............................................................................................20T2.009.00------------------------------1.00-----------------------------------------------------------------------------------------1.00----------------------------------
..................................................GTGAGAAGAGAGGAGGTATGGGGAG..................................................................................................................2512.002.00-----------------------------------------------------------------------------------------------------------1.00---------------------------------1.00-------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCAac...................................................25AC1.002.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GGAGGATCTGCTGTTAG..............................................................................................1711.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAAg...........................................................................................22G1.0011.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CTCTAACCTCTGATCCTTCCC......................................................2111.001.00-----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
..................................................GTGAGAAGAGAGGAGGTATGGGGAGG.................................................................................................................2611.001.00-----------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
.........................................................................AGGAGGGAGGATCTGCTGT.................................................................................................1911.001.00--------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
........................CTGGACTGCAATGCCAAGCAGTG..............................................................................................................................................2311.001.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
..................AGCAAACTGGACTGCAATGCCAAGCAG................................................................................................................................................2711.001.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTAACCTCTGATCCTTCCCACAt..................................................24T1.0022.00----------------------------------------------------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCctcc.......................................................21CTCC1.000.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.........................................................................................................................CTCTGATCCTTCCCACAGt.................................................19T1.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................GGAGGGAGGATCTGCTGTTAGAtt...........................................................................................24TT1.0016.00-------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAGc.............................................................................................23C1.0028.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTAGt.............................................................................................21T1.007.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAAcgt.........................................................................................24CGT1.0011.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCCCcc....................................................20CC1.001.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTcg..............................................................................................20CG1.000.00------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................GGAGGATCTGCTGTTAGAAAGT.........................................................................................2211.001.00------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCCCgt....................................................20GT1.001.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.......................................................AAGAGAGGAGGTATGttgt...................................................................................................................19TTGT1.000.00-------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.............................................................................GGGAGGATCTGCTGTTAGAAAGT.........................................................................................2311.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
........................CTGGACTGCAATGCCAAGCAGTGGAGGa.........................................................................................................................................28A1.000.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CTCTAACCTCTGATCCTTCCCACA...................................................2411.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCCCA.....................................................1911.001.00-----------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCCCACAGtaa...............................................25TAA1.0076.00--------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
.....................................................................................................................TAACCTCTGATCCTTCCCcca...................................................21CCA1.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTA...............................................................................................1911.001.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGata...............................................................................................18ATA1.000.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAAAGTCT.......................................................................................2611.001.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................CGATGTAGCCATGTTCCTAGAGAT.....2411.001.00------------------------------------------------------------------------------------------------------------------------------------------------------1.00----
............................................................................AGGGAGGATCTGCTGTTAGAAt...........................................................................................22T1.0011.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCCC......................................................1811.001.00----------------------------------1.00------------------------------------------------------------------------------------------------------------------------
......................................................................................................................AACCTCTGATCCTTCCCACAGa.................................................22A1.001.00---------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
............................................................................AGGGAGGATCTGCTGTTAGAAc...........................................................................................22C1.0011.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................GGACTGCAATGCCAAGCAGT...............................................................................................................................................2011.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTAGAAAGT.........................................................................................2511.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................GAGGATCTGCTGTTAGA.............................................................................................1711.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCACAa..................................................26A1.003.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
.......................................................................................................................................................CATCCTCAACGATGTAGCCATGTTCCT...........2711.001.00-----------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
......................................................................................................................AACCTCTGATCCTTCCCACAG..................................................2111.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTAt..............................................................................................20T1.001.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCCCAa....................................................24A1.002.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCCCAtag..................................................22TAG1.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTAACCTCTGATCCTTCCCACt...................................................23T1.005.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTGTTAta.............................................................................................23TA1.0015.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TAACCTCTGATCCTTCgcac....................................................20GCAC1.000.00----------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................AGGAGGGAGGATCTGCTG..................................................................................................1811.001.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
............................................................................AGGGAGGATCTGCTGcat...............................................................................................18CAT1.000.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GTAGCCATGTTCCTAGAGATT....2111.001.00--------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................................................CCTCTAACCTCTGATCCTTCt.......................................................21T1.003.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
...........................................................................GAGGGAGGATCTGCTGTTAGAAAGTC........................................................................................2611.001.00-----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................GGAGGATCTGCTGTTAGA.............................................................................................1811.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
ACCTCTTATCCCAACAGGAGCAAACTGGACTGCAATGCCAAGCAGTGGAGGTGAGAAGAGAGGAGGTATGGGGAGGAGGGAGGATCTGCTGTTAGAAAGTCTCTGGTTTGTGACCTCTAACCTCTGATCCTTCCCACAGGCTCTTTGCCGACATCCTCAACGATGTAGCCATGTTCCTAGAGATTATGG
..................................................(((((((((.(((((.((((....))))........((((...)))).....)))))..))))))))).....................................................
....................................................................69....................................................................139................................................
SizePerfect hitTotal NormPerfect NormSRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		mjTestesWT4()
Testes Data. (testes)		mjLiverWT3()
Liver Data. (liver)		mjTestesWT3()
Testes Data. (testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR206940(GSM723281)
other. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT1()
Testes Data. (testes)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR037905(GSM510441)
brain_rep2. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR206941(GSM723282)
other. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR206939(GSM723280)
other. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR060845(GSM561991)
total RNA. (brain)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		mjTestesWT2()
Testes Data. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042482(GSM539874)
mouse skin tissue [09-002]. (skin)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR206942(GSM723283)
other. (brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
...................................................................................................................ggaAACCTCTGATCCTTC........................................................ 18gga1.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------1.00--
...........................................................................................................................gccATCCTTCCCACAGGC................................................ 18gcc1.000.00----------------------------------1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................aggaGTAGCCATGTTCCTA.......... 19agga1.000.00-------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.................................................................................................................aataTAACCTCTGATCCTT......................................................... 19aata1.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-----------------------------