ID: mmu-mir-3098
chr6:125145760-125145946 +
Display Libraries
(2)
AGO1.ip 		(15)
AGO2.ip 		(2)
AGO3.ip 		(5)
B-CELL 		(37)
BRAIN 		(7)
CELL-LINE 		(1)
DCR.mut 		(2)
DGCR8.mut 		(18)
EMBRYO 		(11)
ESC 		(7)
FIBROBLAST 		(3)
HEART 		(9)
LIVER 		(9)
OTHER 		(7)
OTHER.mut 		(1)
OVARY 		(5)
PIWI.ip 		(4)
SKIN 		(5)
SPLEEN 		(23)
TESTES 		(3)
THYMUS 		(8)
TOTAL-RNA
Showing top 80 reads
AACTGCCCACCAGGGAGCTTGCATGGGACTGAGCTAGGCCCTCCACACATTGTGGTTGGGAGGAGTCCTAACAGCAGGAGTAGGAGCTCTGATTATCCCCTGCTTCTGCTGCCTGCCTTTAGGACCCTTTCCCCACAACCGGCTGCCTTGCCCAGCCCTAATAGAAGAGGTGCCTTGTCTTACTGTA
............................................................(((.(((((((..((((((((((((((..............))))))))).)))))..))))))))))...........................................................
............................................................61...................................................................130.......................................................
SizePerfect hitTotal NormPerfect NormSRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073955(GSM629281)
total RNA. (blood)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		mjTestesWT1()
Testes Data. (testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		mjLiverWT1()
Liver Data. (liver)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM416732(GSM416732)
MEF. (cell line)		SRR029123(GSM416611)
NIH3T3. (cell line)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		mjTestesWT3()
Testes Data. (testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206941(GSM723282)
other. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR206939(GSM723280)
other. (brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR206940(GSM723281)
other. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		GSM475280(GSM475280)
Mili-IP. (mili testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037922(GSM510460)
e12p5_rep4. (embryo)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR077865(GSM637802)
18-30 nt small RNAs. (liver)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		GSM566420(GSM566420)
Endougenous small RNA from mouse NIH3T3 cell, infected with MHV-68. (fibroblast)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		GSM179088(GSM179088)
Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM510444(GSM510444)
brain_rep5. (brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		mjLiverWT3()
Liver Data. (liver)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		mjTestesWT4()
Testes Data. (testes)		GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR206942(GSM723283)
other. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR037897(GSM510433)
ovary_rep2. (ovary)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
.................................................................TCCTAACAGCAGGAGTAGGAGC....................................................................................................223212.33212.3336.3327.0013.0014.3311.670.339.3310.000.335.673.338.330.67-3.33-5.002.001.67-3.331.002.672.672.000.671.00-1.332.672.331.001.000.331.670.671.000.670.670.67----1.00-1.670.670.671.330.670.330.330.330.330.33-1.00-1.001.000.670.331.33---0.67-------1.00-1.00--1.00-1.001.00-----------0.670.670.670.670.330.330.670.67-0.330.67-0.670.670.330.670.670.67-------0.330.330.330.330.330.330.33-0.330.330.330.330.330.330.33---------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACC.............................................................23159.0059.004.003.004.002.004.004.00-3.004.004.001.001.00-6.00-8.00-2.00--------1.00------1.00-1.00-1.00---1.00-----1.00---1.00-1.00----------------1.00-------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGAC..............................................................22144.0044.001.003.003.001.001.004.002.00-6.00-2.00-7.001.00---3.00---3.00------2.00---1.00-1.00-----1.00-------------------------1.00------1.00----------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAG.....................................................................................................21431.2531.250.75-1.001.500.750.503.750.500.75-1.001.25-0.251.00-1.00-1.50-0.50-0.251.002.250.25--0.500.250.25-0.250.25--0.250.500.500.25----------0.25-0.250.250.250.250.250.500.500.500.25----0.25-0.50---------------------------0.25---0.500.25---0.25---------0.50-0.250.250.250.50----------------0.250.25--0.25-0.250.25--0.25---
.......................................................................................................TTCTGCTGCCTGCCTTTAGGA...............................................................21123.0023.001.001.001.00--4.00------3.00-------------2.00----1.00-------1.00--1.00-1.00---1.00-----1.00-------1.00--1.00------1.00-------------------1.001.00--------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGG................................................................20112.0012.00----------3.00-------3.006.00----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACa.............................................................23A10.0044.00--1.001.001.002.00-------------------3.00-------------------------------------------------------1.00-------1.00------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGA......................................................................................................2049.009.00--0.750.50-1.50-0.50-1.000.50-----------0.500.50--0.25----0.25-0.25---0.25------------0.25---------------0.25------------------------------0.25--------------------0.25--------------------0.25----0.250.25-0.250.25-
.................................................................TCCTAACAGCAGGAGTAGGAGt....................................................................................................22T8.2531.252.000.25-0.25-0.25-0.50--0.500.25-0.25---------------0.75-0.75-0.25--0.25-------------0.50-------------0.25-------------------------------0.25-0.25-----------------0.250.25-----------------------0.25--------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACt.............................................................23T7.0044.00--1.00--1.00--1.00----1.00--------------------------1.00-1.00---------------------------------1.00-------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGCT...................................................................................................2334.334.33--1.000.67-------0.67-0.33------0.33------------0.33-----------------0.33----0.33----0.33----------------------------------------------------------------------------------------
............................................ACACATTGTGGTTGGGAGGAG..........................................................................................................................2113.003.00---1.00-----1.00----------------------------------------------1.00---------------------------------------------------------------------------------------------
...........................................CACACATTGTGGTTGGGAGGAG..........................................................................................................................2213.003.001.001.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TAATAGAAGAGGTGCCTTGTCTTACT...2613.003.00---------------------------------------------1.00---------------------------------------1.00--------1.00-------------------------------------------------------
.......................................................................................................................................................................AGGTGCCTTGTCTTACTG..1812.002.002.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACCCTTT.........................................................2712.002.00---------------------------1.00---------------1.00----------------------------------------------------------------------------------------------------------
........................................................................................................TCTGCTGCCTGCCTTTAGGACC.............................................................2212.002.00---1.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGccc.............................................................23CCC2.0012.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGAa..............................................................22A2.0023.00------------------------------------1.00-------------------------------------1.00---------------------------------------------------------------------------
.......................................................................................................................TAGGACCCTTTCCCCACAACCGGCTGCCT.......................................2912.002.00----------------------------------------------------------------------------------------1.00-1.00-----------------------------------------------------------
..........................................CCACACATTGTGGTTGGGAGGAG..........................................................................................................................2312.002.00---------2.00--------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................AGGAGTAGGAGCTCTca...............................................................................................17CA2.000.00------------------------------------------------------------------------------1.00--------1.00--------------------------------------------------------------
...................................................................CTAACAGCAGGAGTAGGAGC....................................................................................................2031.671.67--------0.33--0.33---------0.67-----------0.33--------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGG.......................................................................................................1981.621.62-------0.12-0.25----0.25---------0.120.12------0.12-------------------------------------------------------------------0.250.120.12-----------------0.12-----------------------------
......................................................................................................CTTCTGCTGCCTGCCTTTAGG................................................................2111.001.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGAac.............................................................23AC1.0023.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...................TGCATGGGACTGAGCTAGGCCCTCCA..............................................................................................................................................2611.001.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------
..........CAGGGAGCTTGCATGGGACTGAG..........................................................................................................................................................2311.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTc.........................................................................................................17C1.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACg.............................................................23G1.0044.00--------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGAt..............................................................22T1.0023.00-------------------------------------------------------------------------------------------1.00----------------------------------------------------------
....................................................................................................................CTTTAGGACCCTTTCCCCACAACCGGCT...........................................2811.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................TAGAAGAGGTGCCTTGTCTTACTGT.2511.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------
.................................................................................................................................................................TAGAAGAGGTGCCTTGTCTTACTGTA2611.001.00-------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACCt............................................................24T1.0059.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...............................................................AGTCCTAACAGCAGGAGTAGGA......................................................................................................2211.001.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGta...............................................................21TA1.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...............................................................AGTCCTAACAGCAGGAGTAGGAGa....................................................................................................24A1.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................AATAGAAGAGGTGCCTTGT.........1911.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AGAAGAGGTGCCTTGTCT.......1811.001.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGtac..............................................................22TAC1.000.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------
........................................................................AGCAGGAGTAGGAGCTCTGA...............................................................................................2011.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TAATAGAAGAGGTGCCTTGTCTTAC....2511.001.00---------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACaa............................................................24AA1.0044.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAtgcc..............................................................22TGCC1.000.00----------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TGCTGCCTGCCTTTAGGACCCTTTCtcc.....................................................28TCC1.000.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................GAAGAGGTGCCTTGTCTTA.....1911.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................AGGAGTAGGAGCTCTGAT..............................................................................................1811.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGACtgt...........................................................25TGT1.0044.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................TTCTGCTGCCTGCCTTTAGGAacc............................................................24ACC1.0023.00------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
...............................................................AGTCCTAACAGCAGGAGTAGGAG.....................................................................................................2311.001.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------
..........................................................................................................TGCTGCCTGCCTTTAGGAC..............................................................1911.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................TGCCTTGCCCAGCCCTAAaag.......................21AAG1.000.00-------------------------------------------------------1.00----------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAa.....................................................................................................21A0.759.00--0.25----0.250.25---------------------------------------------------------------------------------------------------------------------------------------------
......................ATGGGACTGAGCTAGGC....................................................................................................................................................1740.750.75-------------------------------------------------------------------------------------------------------0.75----------------------------------------------
....................................................................TAACAGCAGGAGTAGGAGC....................................................................................................1930.670.67-------------------------------------------------------------------------------------------------------------0.33-------------------------0.33--------------
.................................................................TCCTAACAGCAGGAGTAGGAaa....................................................................................................22AA0.509.00----------------0.25-------------------------------------------0.25-----------------------------------------------------------------------------------------
........ACCAGGGAGCTTGCATG..................................................................................................................................................................1760.500.50--------------------------------0.50---------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGCat..................................................................................................24AT0.33212.33----0.33-------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGCTaa.................................................................................................25AA0.334.33---0.33--------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGCTt..................................................................................................24T0.334.33-------------------------0.33----------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGCa...................................................................................................23A0.33212.33-----------------------0.33------------------------------------------------------------------------------------------------------------------------------
.....................................................................AACAGCAGGAGTAGGAG.....................................................................................................1760.330.33-------------------------------------------------0.33----------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGCaga.................................................................................................25AGA0.33212.33-------------------------------------------------------------0.33----------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGCc...................................................................................................23C0.33212.33---0.33--------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGg....................................................................................................22G0.2531.25----------------------0.25-------------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAt.....................................................................................................21T0.259.00------------------------------------------------------------------------------------------------------------------------------------------0.25-----------
.................................................................TCCTAACAGCAGGAGTAGGAcc....................................................................................................22CC0.259.000.25-----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CCTAACAGCAGGAGTAGGAG.....................................................................................................2050.200.20-----------------------------------------------------------------------------------------------------------------------------------------------------0.20
...........AGGGAGCTTGCATGGGA...............................................................................................................................................................1770.140.14--------------------------------------------------------------------0.14---------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGcgc....................................................................................................22CGC0.121.62--------------0.12---------------------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGt......................................................................................................20T0.121.62-----------------------------0.12------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAG........................................................................................................1890.110.11--------------------------------------------------------------------------------------------------------0.11---------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGtagc....................................................................................................22TAGC0.110.11------------------------0.11-----------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGcagc....................................................................................................22CAGC0.110.11---------------------------------------0.11--------------------------------------------------------------------------------------------------------------
AACTGCCCACCAGGGAGCTTGCATGGGACTGAGCTAGGCCCTCCACACATTGTGGTTGGGAGGAGTCCTAACAGCAGGAGTAGGAGCTCTGATTATCCCCTGCTTCTGCTGCCTGCCTTTAGGACCCTTTCCCCACAACCGGCTGCCTTGCCCAGCCCTAATAGAAGAGGTGCCTTGTCTTACTGTA
............................................................(((.(((((((..((((((((((((((..............))))))))).)))))..))))))))))...........................................................
............................................................61...................................................................130.......................................................
SizePerfect hitTotal NormPerfect NormSRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073955(GSM629281)
total RNA. (blood)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		mjTestesWT1()
Testes Data. (testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		mjLiverWT1()
Liver Data. (liver)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM416732(GSM416732)
MEF. (cell line)		SRR029123(GSM416611)
NIH3T3. (cell line)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR039610(GSM527274)
small RNA-Seq. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		mjTestesWT3()
Testes Data. (testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206941(GSM723282)
other. (brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR206939(GSM723280)
other. (brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR206940(GSM723281)
other. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		GSM475280(GSM475280)
Mili-IP. (mili testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037922(GSM510460)
e12p5_rep4. (embryo)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR077865(GSM637802)
18-30 nt small RNAs. (liver)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR095853(SRX039174)
sequencing of miRNA from wild type and diseas. (heart)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		GSM566420(GSM566420)
Endougenous small RNA from mouse NIH3T3 cell, infected with MHV-68. (fibroblast)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		GSM179088(GSM179088)
Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM510444(GSM510444)
brain_rep5. (brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		mjLiverWT3()
Liver Data. (liver)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		mjTestesWT4()
Testes Data. (testes)		GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		SRR206942(GSM723283)
other. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR037897(GSM510433)
ovary_rep2. (ovary)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
..................................................................................................agttCTTCTGCTGCCTGCCT..................................................................... 20agtt1.000.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------------
.........................cGACTGAGCTAGGCCC.................................................................................................................................................. 16c1.000.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAG..................................................................................................... 2141.001.00-----------------------------------------------------------------------------------------------------------------0.50-0.50----------------------------------
.................................................................TCCTAACAGCAGGAGTAGGAGC.................................................................................................... 2231.001.00----------------------------------------------------------------------------------------------------------0.67--------------------0.33----------------------
...................................................................................................cgttTTCTGCTGCCTGCCT..................................................................... 19cgtt1.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................GCTGCCTTGCCCAGCCCT............................ 1830.670.67-0.67----------------------------------------------------------------------------------------------------------------------------------------------------