ID: mmu-mir-3097
chr5:35363648-35363814 +
Display Libraries
(3)
AGO1.ip
(19)
AGO2.ip
(2)
AGO3.ip
(6)
B-CELL
(43)
BRAIN
(5)
CELL-LINE
(2)
DCR.mut
(3)
DGCR8.mut
(14)
EMBRYO
(10)
ESC
(6)
FIBROBLAST
(3)
HEART
(9)
LIVER
(1)
LUNG
(4)
LYMPH
(13)
OTHER
(12)
OTHER.mut
(1)
OVARY
(1)
PANCREAS
(3)
PIWI.ip
(3)
PIWI.mut
(8)
SKIN
(7)
SPLEEN
(30)
TESTES
(3)
THYMUS
(10)
TOTAL-RNA
(2)
UTERUS
Showing top 134 reads
ACTCAGCTCTCCAGCCCCGAAGCAGAGTCAGCCTTAGGAATGTTTGAGTGACACAGGTGGGAAGTGTGTGTCCAGTGGGTGTGTCTACAGATCTGCTCAGACCTTTCTACCTGTCAGCTCTCTTACAGGGCCCGGGAGATTTTCAGTAAATTCCTGTGCAGCAAAGC
........................................................((((((((((((.((.((...((..(((.((....)).)))..)))).)))))))))))))).....................................................
..................................................51....................................................................121................................................
SizePerfect hitTotal NormPerfect NormAgo3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR206941(GSM723282)
other. (brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
mjTestesWT1()
Testes Data. (testes)
SRR206940(GSM723281)
other. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR206942(GSM723283)
other. (brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR206939(GSM723280)
other. (brain)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT3()
Testes Data. (testes)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesWT4()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
mjLiverWT3()
Liver Data. (liver)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM475281(GSM475281)
total RNA. (testes)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR037905(GSM510441)
brain_rep2. (brain)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
GSM416732(GSM416732)
MEF. (cell line)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)
GSM317183(GSM317183)
Ago-1 IP small RNAs from mouse brain. (ago1 brain)
GSM640582(GSM640582)
small RNA in the liver with paternal control . (liver)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR037910(GSM510447)
newborn_rep3. (total RNA)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
...............................................................................................CTCAGACCTTTCTACCTGTCAGt.................................................23T375.00214.0071.0064.00103.0059.00-17.007.00-----2.002.00----2.00-1.003.004.00-2.00--3.002.00--1.00---1.00-3.00-1.001.00--1.002.001.00--1.00-2.001.00-1.00------1.00-1.00-----3.00--2.001.00----1.00------------1.00-1.001.00---------------------------2.00----------1.00-------1.00---------------------1.00-------------
...................................................CACAGGTGGGAAGTGTGTGTCC..............................................................................................221303.00303.0070.0051.0031.0050.0010.0026.007.007.0010.00-1.00-1.001.003.001.001.00-2.002.00------1.001.00--1.00---3.00------2.00-----1.00----2.00-1.00-1.00---------1.00--------1.00---3.00----1.00-1.002.00--------------1.00---1.00-------1.00---------1.00-------------1.00--1.00-------------------------1.00--------
...................................................CACAGGTGGGAAGTGTGTGTCCA.............................................................................................231302.00302.0069.0036.0037.0038.0018.007.004.0011.005.001.002.002.003.00-2.00----3.001.00-2.00--1.002.002.00-1.004.002.00--1.00-12.001.001.00--2.004.00-1.002.00-1.001.00-1.001.001.00-3.00--2.00-1.00------1.001.00---2.00--------1.001.00--1.00--------1.00-----1.00-1.00------------------1.00----------------1.00----1.00-------------------------1.00-------
...............................................................................................CTCAGACCTTTCTACCTGTCAG..................................................221214.00214.001.002.002.003.001.001.008.003.002.0015.005.008.006.0013.002.001.005.0018.007.002.00-12.003.00-4.008.003.002.003.005.002.001.001.002.00-3.00-1.00-3.00-2.002.001.002.003.002.001.00-3.002.002.00-2.003.00-3.001.00--2.00-2.004.001.00--3.00-1.00---4.001.002.00-----1.00---------------1.00--------1.00---1.00------1.00-----------------------------------------------------1.001.00---
................................................................................................TCAGACCTTTCTACCTGTCAGt.................................................22T167.0010.0022.0026.0022.0022.00-9.0010.00-1.00-1.001.001.00-----2.002.00-2.004.00-3.00-2.003.00-2.001.001.00-2.003.003.00-1.00-----1.001.00----1.001.00-1.001.00--1.001.00-1.00---------1.00-------1.00---2.00---1.00---1.00--2.00----------1.00-----1.00-----------------1.00------------------------1.00-----------------------
...................................................CACAGGTGGGAAGTGTGTGTC...............................................................................................211103.00103.0011.0021.0010.0016.003.003.005.002.002.002.001.001.001.001.001.00-2.00-------1.00-1.00----1.001.00-2.00--1.001.00---------1.00--1.00-------1.00--1.00-------1.00------------------------1.00--------2.00--------------------1.00------------------1.00---1.00----1.00---------------1.00------
...................................................CACAGGTGGGAAGTGTGTGTCCAt............................................................................................24T93.00302.009.008.006.006.006.001.001.003.006.001.004.001.002.00--1.001.00--4.001.00-1.003.00----1.003.00-2.00-2.001.00---1.00-----1.00-------2.00----1.00-1.00-2.001.00-1.00-----------1.00--------------2.00------2.001.00-----------1.00--1.00-------------1.00-----------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCA...................................................21165.0065.001.002.003.002.00-1.008.00--5.004.002.001.00---1.001.00--1.00---3.001.001.00--1.00--2.002.00-1.00-3.00-1.00-------------2.00--2.001.00---4.00----------1.00-------1.00-1.00------1.00-------1.00------------1.00--------1.00------1.00--------------------1.00----------------------------
...................................................CACAGGTGGGAAGTGTGTGT................................................................................................20150.0050.00-5.00-1.00------2.004.004.00-1.00------1.00---3.00---1.00---1.00--------1.00---------------3.00------4.00--1.00-1.00-------3.00-----1.00---------3.00-1.001.00---2.001.002.00------------------1.00------------------------------------------1.00-------1.00--
...................................................CACAGGTGGGAAGTGTGTGTCCAa............................................................................................24A47.00302.003.001.00-2.008.00--6.005.00---1.00-2.004.00---1.00---3.00------1.002.00----------1.00---1.00-----1.00------1.00-------------------------------1.00-----------------1.00-----1.00-------------------------------------------1.00----------------
..................................................ACACAGGTGGGAAGTGTGTGTCC..............................................................................................23146.0046.00---2.008.00--6.001.005.002.00-1.00--1.001.00-1.001.00-----3.001.00-1.00-2.003.00------1.001.00---1.00-1.00-1.00--------------1.00---------------------------------------1.00-------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCAGa.................................................23A43.00214.00----------2.00--3.00----1.00-1.00-----1.00-5.00--1.00---1.00-1.00-1.005.00--1.00--2.00--2.00--------------1.00--1.001.00-----1.001.00-1.001.00----2.00--2.00-------------------------1.001.00---1.00--1.00-------------------------------------------1.00-----------
...................................................CACAGGTGGGAAGTGTGTGTCa..............................................................................................22A32.00103.00-5.001.004.00-2.00------1.00-1.00-2.00---------1.00-----------2.00----1.00----2.00-----------------1.00-----------------------------2.00--------2.00-2.00---------------------1.00----------------1.00---------1.00-------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCA.............................................................................................24130.0030.00----5.00--4.003.002.00----2.001.001.00---------1.00--1.001.00-1.00--------1.00-----1.00--1.00-1.00-----------------------1.00-------------1.00----------------------------------------1.00-----------------------1.00--------------------
..................................................ACACAGGTGGGAAGTGTGTGT................................................................................................21126.0026.00-------4.00-2.001.003.001.001.001.00-----3.00-1.00---1.00-----2.00-------------1.00----1.00-----1.00----------------1.00-------------------------1.00--------------------------------------------1.00------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTC....................................................20125.0025.00--1.00---1.00---1.00--1.00--1.00-2.00-3.00----1.00-1.00----1.002.00-3.00---1.00-----1.00-----------------------1.00----------1.00-1.00--------------------------------------------------1.00--------------------------1.00---------------
...................................................CACAGGTGGGAAGTGTGTGTCCAtt...........................................................................................25TT19.00302.00----1.00---------1.00--------1.00----1.00---1.00-----------------1.00----7.00--------2.00-----------1.00--1.001.00-----------------------------------------------------------------------------------------1.00-----
..................................................ACACAGGTGGGAAGTGTGTGTC...............................................................................................22118.0018.001.00---2.00--1.001.00-2.002.00--1.001.00------------2.00-1.00-------1.00---------------------------------2.00---------------------------1.00---------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCt..............................................................................................22T11.00103.00-1.001.001.00--2.00-------1.00-----------------------3.00---------1.00---------------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................TCAGACCTTTCTACCTGTCAG..................................................21110.0010.00-1.001.00-------1.001.00-1.00-------------1.00---------------1.00---1.00----------------------------------------------------------------------1.00---1.00-----------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAat...........................................................................................25AT10.00302.001.00-1.00-2.00--2.00------1.00--------2.00------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAG............................................................................................2419.009.00-1.00-1.00-----------1.00------1.00-------1.00----------1.00-----1.00-----------------------1.00-------------------------------------------------------------------------------------------1.00------------
................................................................................................TCAGACCTTTCTACCTGTCAGa.................................................22A9.0010.00-------------2.00----------1.00---------1.00----1.00-----------------------------1.00-----------------1.00-1.00-----------------------------------------------------------------------1.00--------------
...............................................................................................CTCAGACCTTTCTACCTGTCAt..................................................22T8.0065.00------1.00---------------------------1.00----------1.001.00--1.00----------------1.00--1.00---------------------------------------------------------------------------------------1.00------------------
...................................................CACAGGTGGGAAGTGTGTGTCCc.............................................................................................23C8.00303.003.002.002.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCCA.............................................................................................2217.007.001.001.00-----------------1.00---------------------------------------1.001.00-----------------------------------------------2.00-------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAaa...........................................................................................25AA7.00302.00----1.00---1.00------1.00-------------------------2.00-----------------------------------1.00--------------------------------------1.00-----------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCaa.............................................................................................23AA7.00103.003.00---------------2.00-----------------------------------------------------------------------------------------------1.00---------------------------------------------1.00-----------------
...............................................................................................CTCAGACCTTTCTACCTGT.....................................................1916.006.00--1.001.00------------1.00-----------------------------------------------------2.00--------------1.00------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCa..............................................................................................23A6.0018.00-----------1.00--1.001.00------------------1.00---1.00---------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCtt............................................................................................24TT5.00303.00-2.001.00-----------------2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAt............................................................................................25T5.0030.00--------1.00--1.00----------1.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCt.............................................................................................23T5.00303.00--2.001.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................TCAGACCTTTCTACCTGTCAGta................................................23TA5.0010.00------------------2.00-2.00----------------------------------------------------------------------------------------------------------------------1.00------------------------------------
...................................................CACAGGTGGGAAGTGTGTG.................................................................................................1924.504.50-0.50--0.50---0.50-------------0.50----------------0.50------------------------------------------------------------------------------------0.500.50------------------------------------------------0.500.50
...................................................CACAGGTGGGAAGTGTGTGTCCAGT...........................................................................................2514.004.00-----------------------2.00------------------1.00-----1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................GACACAGGTGGGAAGTGTGTGT................................................................................................2214.004.00-----------2.00--1.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCt..............................................................................................23T4.0018.00----------1.00-1.00------1.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCC..............................................................................................2114.004.00---1.00----------------------------------------1.00--------------------------------------------------2.00--------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAta...........................................................................................25TA3.00302.00-----------------------2.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCg..............................................................................................22G3.00103.00--1.00------------------------------------------------------------1.00-----------------------------------1.00----------------------------------------------------------------------------
.................................................GACACAGGTGGGAAGTGTGTGTCC..............................................................................................2413.003.00--------1.00-----------------------------------1.00-1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGT................................................................................................1913.003.00---1.00--------------------------------------------------------------1.00--------------------------1.00----------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCCAGT...........................................................................................2413.003.00----------------------------------------3.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................GCTCAGACCTTTCTACCTGTCA...................................................2213.003.00--1.00-1.00-------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAa............................................................................................25A2.0030.00---------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................CAGGTGGGAAGTGTGTGTCCAa............................................................................................22A2.001.00--------1.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTt...............................................................................................21T2.0050.00----------------------------------------------------------------------------------1.00------------------------------------1.00--------------------------------------------------------
................................................................................................TCAGACCTTTCTACCTGTCcgt.................................................22CGT2.001.00--1.00-----------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
................................................................................................TCAGACCTTTCTACCTGTCA...................................................2012.002.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------1.00--------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCttta..........................................................................................26TTTA2.00303.00----------------------------------------------------------------------------------------2.00---------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTgagt.................................................23GAGT2.006.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAtt...........................................................................................26TT2.0030.00------------------------------------------------------------1.00-------------------------------------1.00-----------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCt...................................................21T2.0025.00---------------------------------1.00----------------------------------------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCtt..................................................22TT2.0025.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCCAG............................................................................................2312.002.00---------------1.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCga.............................................................................................23GA2.00103.00-1.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAag...........................................................................................25AG2.00302.00-------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAGT...........................................................................................2612.002.00------------------------1.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTG.................................................................................................2012.002.00-------------------------------------------1.00-----------------------------------------1.00------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCt.............................................................................................24T2.0046.00----1.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCAGtt................................................24TT2.00214.00--1.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAGa...........................................................................................25A2.009.00-1.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCAtt.................................................23TT2.0065.00----------------------------1.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGcgt................................................................................................20CGT2.000.00----------------------------------------------------------2.00---------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCttt............................................................................................24TTT2.00103.00-----1.00---------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCAGg.................................................23G2.00214.00---2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCAGaaa...............................................25AAA1.00214.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCCAt............................................................................................23T1.007.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................AGACCTTTCTACCTGTCA...................................................1811.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAat...........................................................................................26AT1.0030.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................CAGGTGGGAAGTGTGTGTCCA.............................................................................................2111.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTct................................................................................................21CT1.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCaaa............................................................................................24AAA1.00103.00----------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...............................................................................................CTCAGACCTTTCTACCTGTa....................................................20A1.006.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCCAGc...........................................................................................24C1.002.00----------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................ACAGGGCCCGGGAGATTTTCAGT....................2311.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCgt.............................................................................................24GT1.0018.00----------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................AGCTCTCTTACAGGGaaaa.................................19AAAA1.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTgc..............................................................................................23GC1.0026.00---------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................CCTTTCTACCTGTCAGa.................................................17A1.000.00---------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCcg..................................................22CG1.0025.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCCAat...........................................................................................24AT1.007.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................TCAGACCTTTCTACCTGTCAGaa................................................23AA1.0010.00---------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCtat............................................................................................24TAT1.00103.00-------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------
................................................................................................TCAGACCTTTCTACCTGTtagt.................................................22TAGT1.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGaa...............................................................................................22AA1.002.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................TCAGACCTTTCTACCTGTC....................................................1911.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCat.............................................................................................23AT1.00103.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTat..............................................................................................22AT1.0050.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................GCTCAGACCTTTCTACCTGTCAG..................................................2311.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCta............................................................................................25TA1.0046.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCAGat................................................24AT1.00214.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................GACACAGGTGGGAAGTGTGTGTC...............................................................................................2311.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................GCTCAGACCTTTCTACCTGTCcg..................................................23CG1.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAtatt.........................................................................................28TATT1.0030.00----------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
................................................TGACACAGGTGGGAAGTGTGTGTCC..............................................................................................2511.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................GACACAGGTGGGAAGTGTGTGTCCA.............................................................................................2511.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTtaga.................................................23TAGA1.006.00----------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
.................................................GACACAGGTGGGAAGTGTGTGTCa..............................................................................................24A1.001.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTgca.............................................................................................23GCA1.0050.00------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTCCAGa...........................................................................................24A1.002.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAta...........................................................................................26TA1.0030.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTttca..............................................................................................22TTCA1.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAaaat.........................................................................................27AAAT1.00302.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCCAG............................................................................................2511.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................AGACCTTTCTACCTGTCAG..................................................1911.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTtt..............................................................................................22TT1.0050.00---------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
.................................................GACACAGGTGGGAAGTGTGTGTCCt.............................................................................................25T1.003.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAagt..........................................................................................26AGT1.00302.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTaag..................................................22AAG1.006.00------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGT..................................................................................................1911.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCca..................................................22CA1.0025.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCtata...........................................................................................25TATA1.00103.00----------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
....................................................ACAGGTGGGAAGTGTGTGTC...............................................................................................2011.001.00---------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTccaa..............................................................................................23CCAA1.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGTCAaagt...............................................25AAGT1.0065.00--------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
................................................................................................TCAGACCTTTCTACCTGTCAGaac...............................................24AAC1.0010.00-------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTaca.............................................................................................23ACA1.0050.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCttat..........................................................................................26TTAT1.00303.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
.......................................................GGTGGGAAGTGTGTGTCCAat...........................................................................................21AT1.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCCAact..........................................................................................26ACT1.00302.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................ACACAGGTGGGAAGTGTGTGTCtaa............................................................................................25TAA1.0018.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGaaa..............................................................................................22AAA0.504.50-------------------------------------0.50------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTGcca...................................................21CCA0.200.20------------------------------------------------------------------------------------------------------------------------------0.20-------------------------------------------------
...............................................................................................CTCAGACCTTTCTACCTG......................................................1850.200.20-----------------------------0.20--------------------------------------------------------------------------------------------------------------------------------------------------
ACTCAGCTCTCCAGCCCCGAAGCAGAGTCAGCCTTAGGAATGTTTGAGTGACACAGGTGGGAAGTGTGTGTCCAGTGGGTGTGTCTACAGATCTGCTCAGACCTTTCTACCTGTCAGCTCTCTTACAGGGCCCGGGAGATTTTCAGTAAATTCCTGTGCAGCAAAGC
........................................................((((((((((((.((.((...((..(((.((....)).)))..)))).)))))))))))))).....................................................
..................................................51....................................................................121................................................
SizePerfect hitTotal NormPerfect NormAgo3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR206941(GSM723282)
other. (brain)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
mjTestesWT1()
Testes Data. (testes)
SRR206940(GSM723281)
other. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR206942(GSM723283)
other. (brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR206939(GSM723280)
other. (brain)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT3()
Testes Data. (testes)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesWT4()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
mjLiverWT3()
Liver Data. (liver)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM475281(GSM475281)
total RNA. (testes)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR037905(GSM510441)
brain_rep2. (brain)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037909(GSM510446)
newborn_rep2. (total RNA)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
GSM416732(GSM416732)
MEF. (cell line)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)
GSM317183(GSM317183)
Ago-1 IP small RNAs from mouse brain. (ago1 brain)
GSM640582(GSM640582)
small RNA in the liver with paternal control . (liver)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR037910(GSM510447)
newborn_rep3. (total RNA)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
.........................................................................atTGGGTGTGTCTACAG............................................................................. 17at1.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
agcaAGCTCTCCAGCCCCG.................................................................................................................................................... 19agca1.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------
ttTCAGCTCTCCAGCCCC..................................................................................................................................................... 18tt1.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
attcCAGCTCTCCAGCCCC..................................................................................................................................................... 19attc1.000.00----------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
....................................................................................................ggCTTTCTACCTGTCAGC................................................. 18gg1.000.00----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................gccaTGTGTCTACAGATCTG........................................................................ 20gcca1.000.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
acgCAGCTCTCCAGCCCC..................................................................................................................................................... 18acg1.000.00-----------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................CACAGGTGGGAAGTGTGTGTCC.............................................................................................. 2211.001.00------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
.........................................................................................................TCTACCTGTCAGCTCT.............................................. 1630.670.67---------------------------------------------------------------------------------------------------------------------------0.67----------------------------------------------------