ID: mmu-mir-3094
chr4:40940678-40940841 +
Display Libraries
(1)
AGO1.ip 		(15)
AGO2.ip 		(1)
AGO3.ip 		(8)
B-CELL 		(34)
BRAIN 		(6)
CELL-LINE 		(2)
DCR.mut 		(2)
DGCR8.mut 		(16)
EMBRYO 		(12)
ESC 		(6)
FIBROBLAST 		(4)
HEART 		(1)
KIDNEY 		(11)
LIVER 		(1)
LUNG 		(4)
LYMPH 		(13)
OTHER 		(10)
OTHER.mut 		(1)
PANCREAS 		(1)
PIWI.mut 		(4)
SKIN 		(6)
SPLEEN 		(18)
TESTES 		(2)
THYMUS 		(8)
TOTAL-RNA
Showing top 109 reads
AACATTCATGTCTGCATCATGTCTGGTCTATACTAATGAACATTTATAGATTGTTGGGGACATTTTTAAAGCATGGATTGGTTATTGATTTGTCCTTTAAATTGTGTCCTCAAGTGTGCTACTGTGGCAGCACCTCCCGAGATGTGTTGTGTGGAACCGATGTG
.....................................................((((((((((.(((((((.((..(((.......)))..)).)))))))..))))))))))...................................................
..................................................51.............................................................114................................................
SizePerfect hitTotal NormPerfect NormSRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		mjLiverWT1()
Liver Data. (liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		mjLiverWT3()
Liver Data. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		mjTestesWT3()
Testes Data. (testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR206942(GSM723283)
other. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR037926(GSM510464)
e9p5_rep4. (embryo)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		mjTestesWT2()
Testes Data. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR206941(GSM723282)
other. (brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR037905(GSM510441)
brain_rep2. (brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR023848(GSM307157)
mEFsmallrna_rep1. (cell line)		GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR037911(GSM510448)
newborn_rep4. (total RNA)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
...................................................TGTTGGGGACATTTTTAAAGC............................................................................................211102.00102.0016.005.003.00-10.008.00-10.004.00--1.00-1.001.00-1.001.004.00-3.00-1.001.001.00------2.00---1.001.001.001.00-1.004.00---1.001.00-------2.00-----1.001.003.002.00--------------------2.001.00----------1.00------1.00----------1.00----------1.00-1.00-------------------1.00-------
...................................................TGTTGGGGACATTTTTAAAGCA...........................................................................................22192.0092.0019.0010.004.006.003.007.006.00-1.004.00--1.003.00--1.001.001.002.00------2.00-----1.00-1.001.00---2.00----2.001.00---2.00--------2.00-1.00--1.001.00-----1.00---1.001.00---------------------1.00-------------------------1.00------1.00------------------------
....................................................GTTGGGGACATTTTTAAAGCAT..........................................................................................22153.0053.00-1.001.003.004.001.008.00-1.002.00--2.00--1.001.001.00-----1.00-1.00-----2.002.00-3.00-2.00---1.00-1.00--1.003.00--1.001.00---------------------------1.001.00-------1.001.00-----1.00----1.00---------1.00------1.00--------------------------------------
.....................................................TTGGGGACATTTTTAAAGCATG.........................................................................................22150.0050.00-9.005.004.003.002.002.002.00-4.00-1.00----------5.001.00-1.00-1.00---------1.001.00---------------------1.00--------1.00-----1.00----------1.00-------------------------1.00------1.00------------------1.00---------1.00------
.....................................................TTGGGGACATTTTTAAAGCAT..........................................................................................21131.0031.002.001.002.001.00--1.00-2.00--1.001.001.001.00---1.00----2.003.00-------------1.00-2.00------2.00------------------1.00-------------------------------1.00-----1.00-------------------------------1.001.00------1.00-------1.00--
.............................................................................................CCTTTAAATTGTGTCCTCAAGT.................................................22126.0026.00--2.00------2.00-2.001.00----------------1.002.00-------1.00--------------1.001.001.00---1.00-2.00------1.00--2.00-1.00---2.001.00--1.00------------------------1.00------------------------------------------------
....................................................GTTGGGGACATTTTTAAAGCA...........................................................................................21125.0025.009.00-1.002.003.00-1.00----2.00--------------------1.00------------------------1.00------------------------------1.00-1.00--------------------1.00---------1.00--------------------1.00------------
............................................................................................TCCTTTAAATTGTGTCCTCAAG..................................................22125.0025.00--1.00----1.00--13.00---1.001.00-1.00------------------------1.00-----1.00----1.00-----1.00-------------------------------------------------------1.00------------------1.00----1.00---------------
...................................................TGTTGGGGACATTTTTAAAGCAT..........................................................................................23123.0023.00---2.00-1.003.00-2.001.00--1.00-------3.00---2.00-1.00---2.00------------------------1.00--------1.00---------------1.00--------------------1.00----------------------------------------------------1.00
............................................................................................TCCTTTAAATTGTGTCCTCAAGT.................................................23119.0019.00-1.00--1.00-------1.00-1.00--1.00---3.00-----2.00-----2.00----------------1.00--1.00-------------------1.00----------------------------------1.00--------1.00----------1.00--------------------1.00-----
............................................................................................TCCTTTAAATTGTGTCCTCAAGa.................................................23A14.0025.00-4.004.001.00-1.00-----------------------1.00------------1.00---------------1.00--------------------------1.00---------------------------------------------------------------------
......................................................TGGGGACATTTTTAAAGCATGG........................................................................................22114.0014.00---1.004.001.00-1.001.00----2.00---1.00----------------------------------2.00----------------------------------------------------------------------------------------------------1.00-
...................................................TGTTGGGGACATTTTTAAAG.............................................................................................20110.0010.00-----2.00-2.001.00----------------------1.00-----1.00---------------------1.00--------------------------1.00--------1.00-----------------------------------------------------------
......................................................TGGGGACATTTTTAAAGCATG.........................................................................................2119.009.00---5.00--3.00------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCATGt........................................................................................23T8.0050.00---1.00----1.00--------1.00-------------------------4.00-------------------------------------------1.00-------------------------------------------------------------------
............................................................................................TCCTTTAAATTGTGTCCTCAAGc.................................................23C6.0025.00--1.001.00-----------1.00---------------------------------------------------------------------------1.00----------1.00----------1.00-----------------------------------------
..................................................TTGTTGGGGACATTTTTAAAGC............................................................................................2216.006.00--1.00-1.002.00--------------------------------------------------1.00--------------------------------------------------------------------------1.00-----------------------
.............................................................................................CCTTTAAATTGTGTCCTCAAGc.................................................22C6.002.00-1.00--2.00----------------------------------1.00----------------1.00-----------------------------------------------------------------------------------------1.00--------
....................................................GTTGGGGACATTTTTAAAGC............................................................................................2016.006.00------------2.00-3.00-------------------------------------------------------------1.00------------------------------------------------------------------------------
..................................................................................................................................................TTGTGTGGAACCGATG..1615.005.00-------------------4.00---------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................TTGTTGGGGACATTTTTAAAGCA...........................................................................................2315.005.00-1.00-1.00--1.00-------------------------------------------------------------------------------------1.00---------------------------------------1.00----------------------
..........................................................................................TGTCCTTTAAATTGTGTCCTCA....................................................2215.005.00------------1.00--------------1.00----------------------------------------1.00--------------1.00-----------------------1.00-----------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCATGa........................................................................................23A4.0050.00-1.00-1.00-----1.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAGCAa..........................................................................................23A4.0092.00-2.00--------------1.00-------------------------------------------------1.00----------------------------------------------------------------------------------------
.............................................................................................CCTTTAAATTGTGTCCTCAAGTa................................................23A4.0026.00-------------------------------------------------------------------------------------------1.00-1.00-----------------------------------1.00---------------1.00---------
..................................................TTGTTGGGGACATTTTTA................................................................................................1814.004.00----------------------------4.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................TCCTTTAAATTGTGTCCTCAA...................................................2114.004.00-----------1.00------1.00------------------1.00-------------------------------------------------------------------------------------------------1.00-------------------
...................................................TGTTGGGGACATTTTTAAAGa............................................................................................21A3.0010.00--------------------------------------------1.00------------------------1.00----------1.00--------------------------------------------------------------------------
....................................................GTTGGGGACATTTTTAAAG.............................................................................................1913.003.00---------------2.00------------------------------------------------------------1.00------------------------------------------------------------------------------
............................................................................................TCCTTTAAATTGTGTCCTCA....................................................2013.003.00------------------------------------1.00-------------------1.00----------1.00---------------------------------------------------------------------------------------
...............................................................................................TTTAAATTGTGTCCTCAAGTat...............................................22AT3.001.00------1.00--------------2.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCATGGA.......................................................................................2413.003.00--1.00------------------------------2.00-------------------------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCA...........................................................................................2012.002.00---------1.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------
.............................................................................................CCTTTAAATTGTGTCCTCAAGa.................................................22A2.002.00-----1.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................CCTTTAAATTGTGTCCTCAAG..................................................2112.002.00-----------2.00-----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCATGG........................................................................................2312.002.00-----------------------1.00--1.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................TTTAAATTGTGTCCTCAAG..................................................1912.002.00--2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGATGTGTTGTGTGGAACCG.....2112.002.00----------------------------------------------------------------------------------2.00------------------------------------------------------------------------
......................................................TGGGGACATTTTTAAAGCATGGA.......................................................................................2312.002.00-1.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................ATAGATTGTTGGGGACATTTTT.................................................................................................2212.002.00----------------2.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................TGTCCTTTAAATTGTGTCCTC.....................................................2112.002.00---------------------------1.00----------------------1.00--------------------------------------------------------------------------------------------------------
..........................................................................................TGTCCTTTAAATTGTGTCCTCAAG..................................................2412.002.00------------------------------------------------------------------------2.00----------------------------------------------------------------------------------
....................................................GTTGGGGACATTTTTAAAGCATG.........................................................................................2312.002.00------1.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------
..................................................TTGTTGGGGACATTTTTAAAGCAT..........................................................................................2412.002.00--1.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................CCTTTAAATTGTGTCCTCAAGTt................................................23T2.0026.00---------------------------------------------1.00----------------------------------------------------------------1.00--------------------------------------------
.................................................ATTGTTGGGGACATTTTTAAAG.............................................................................................2212.002.00-1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCATGGAT......................................................................................2512.002.00-1.00--------------------------------------------------------------------1.00------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAGCAg..........................................................................................23G1.0092.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCgt..........................................................................................21GT1.000.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAGCAc..........................................................................................23C1.0092.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGaatg.........................................................................................22AATG1.000.00-----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGTGTTGTGTGGAACCGATG..2011.001.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
............................................TATAGATTGTTGGGGAtt......................................................................................................18TT1.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAtcat..........................................................................................23TCAT1.000.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
..................................................TTGTTGGGGACATTTTTAAAG.............................................................................................2111.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................TTGTCCTTTAAATTGTGTC........................................................1911.001.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................CGAGATGTGTTGTGTGGAACCGA....2311.001.00-----------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
..................................................TTGTTGGGGACATTTTTAAAGa............................................................................................22A1.001.00------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
...................................................................AAAGCATGGATTGGTTtt...............................................................................18TT1.000.00---------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
..............................................................................................CTTTAAATTGTGTCCTCAAGTa................................................22A1.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAGaa...........................................................................................22AA1.0010.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................CTTTAAATTGTGTCCTCAAG..................................................2011.001.00---------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
...................................................TGTTGGGGACATTTTTAAAGCATGGATTG....................................................................................2911.001.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAGCATGGATT.....................................................................................2811.001.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..........................................TTTATAGATTGTTGGtttc.......................................................................................................19TTTC1.000.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GTGTTGTGTGGAACCGATG..1911.001.00----------------------------------------------------------------1.00------------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAt..............................................................................................19T1.000.00------------------------------------------------------------------------------------------------------------------------------------------------------1.00----
..................................................TTGTTGGGGACATTTTTAAA..............................................................................................2011.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...............................................AGATTGTTGGGGACATTT...................................................................................................1811.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TCCCGAGATGTGTTGTGTGGA.........2111.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...............................ACTAATGAACATTTATAGATTGT..............................................................................................................2311.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
................................CTAATGAACATTTATAGATTGTTGGGGAC.......................................................................................................2911.001.00--------------------------------------------------------------------------------------------------------------------------------------------1.00--------------
............................................................................................TCCTTTAAATTGTGTCCTaaag..................................................22AAAG1.000.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................CGAGATGTGTTGTGTGGAAC.......2011.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................TGTCCTTTAAATTGTGTCCTCAA...................................................2311.001.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCAc..........................................................................................21C1.002.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00-----------
.............................................................................................CCTTTAAATTGTGTCCTCAAtc.................................................22TC1.000.00---------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
...............................................................................................TTTAAATTGTGTCCTCAAttat...............................................22TTAT1.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................TTTAAATTGTGTCCTCAAGagt...............................................22AGT1.002.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................GTTGGGGACATTTTTAAAGCATGt........................................................................................24T1.002.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................ACTGTGGCAGCACCTCCCGAGAT.....................2311.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................GTTGGGGACATTTTTAAAGCATGG........................................................................................2411.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................TTTAAATTGTGTCCTCAAGa.................................................20A1.002.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAtca...........................................................................................22TCA1.000.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
............................................TATAGATTGTTGGGGgtta.....................................................................................................19GTTA1.000.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................TTTATAGATTGTTGGata........................................................................................................18ATA1.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
......................................................................................................................................TCCCGAGATGTGTTGTGTGGAACCGA....2611.001.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
...........................................................................................................................GTGGCAGCACCTCCCGAGA......................1911.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................TTGTTGGGGACATTTTTAAAGCAa..........................................................................................24A1.005.00-------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
........................................CATTTATAGATTGTTGGa..........................................................................................................18A1.000.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...............................................................................................TTTAAATTGTGTCCTCAAGT.................................................2011.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
....................................................GTTGGGGACATTTTTAAAGCATa.........................................................................................23A1.0053.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
.............................................................................................CCTTTAAATTGTGTCCTCcagt.................................................22CAGT1.000.00----------------------------------------------------1.00------------------------------------------------------------------------------------------------------
.....................................................TTGGGGACATTTTTAAAGCATGGATTGGT..................................................................................2911.001.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..................................................TTGTTGGGGACATTTTTAAAGCt...........................................................................................23T1.006.00-----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................TGGGGACATTTTTAAAGCAT..........................................................................................2011.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGTTGGGGACATTTTTAAAGCAaa.........................................................................................24AA1.0092.00-------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...............................................................................................TTTAAATTGTGTCCTCAAGTtt...............................................22TT1.001.00-----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................GATGTGTTGTGTGGAACCGATGT.2311.001.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.............................................................................................CCTTTAAATTGTGTCCTCA....................................................1911.001.00------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................GTCCTTTAAATTGTGTCCTCA....................................................2111.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00---
.....................................................TTGGGGACATTTTTAAAGCATt.........................................................................................22T1.0031.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
...................................................TGTTGGGGACATTTTTA................................................................................................1720.500.50-----------------------------------------------------------------0.50-----------------------------------------------------------------------------------------
AACATTCATGTCTGCATCATGTCTGGTCTATACTAATGAACATTTATAGATTGTTGGGGACATTTTTAAAGCATGGATTGGTTATTGATTTGTCCTTTAAATTGTGTCCTCAAGTGTGCTACTGTGGCAGCACCTCCCGAGATGTGTTGTGTGGAACCGATGTG
.....................................................((((((((((.(((((((.((..(((.......)))..)).)))))))..))))))))))...................................................
..................................................51.............................................................114................................................
SizePerfect hitTotal NormPerfect NormSRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		mjLiverWT1()
Liver Data. (liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		mjLiverWT3()
Liver Data. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		mjTestesWT3()
Testes Data. (testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR206942(GSM723283)
other. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR037926(GSM510464)
e9p5_rep4. (embryo)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		mjTestesWT2()
Testes Data. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR206941(GSM723282)
other. (brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR037905(GSM510441)
brain_rep2. (brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR023848(GSM307157)
mEFsmallrna_rep1. (cell line)		GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR037911(GSM510448)
newborn_rep4. (total RNA)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
...................................................TGTTGGGGACATTTTTAAAGCA........................................................................................... 2212.002.00----------------------------------------------------------------------------------------------------1.00-------------------------1.00----------------------------
..................................................................................taaTGATTTGTCCTTTAA................................................................ 18taa1.000.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................CCTTTAAATTGTGTCCTCAAGT................................................. 2211.001.00------------------------------------------------------------------------------------------------------------------------1.00----------------------------------