ID: mmu-mir-1971
chr14:78591130-78591335 -
Display Libraries
(2)
AGO2.ip 		(2)
B-CELL 		(16)
BRAIN 		(1)
CELL-LINE 		(1)
DGCR8.mut 		(1)
EMBRYO 		(1)
HEART 		(1)
KIDNEY 		(5)
LIVER 		(3)
LYMPH 		(9)
OTHER 		(2)
OTHER.mut 		(1)
OVARY 		(2)
SPLEEN 		(3)
TESTES 		(2)
THYMUS
Showing top 61 reads
GTTGGCATCATGTCACTTCAGGTTAGATGTACATGCTCTTGATGTACAGGGCATCATTTGGTAAAGGCTGGGCTGAGAGGACATCTTTGTTCCATGGACCCAGTAGATAGGCAGCTTCTGCTTCCAGGAACAACTTGTCTGTTTTTCAGTCTATCTACTTCCTAAAATTTCAATTTGCTCACATAGCACTTAAGAGAAGAGCTCTC
...........................................................(((....)))((((((((((((((...(((((((.((((...((((((.((....)))))))))))))))))))..)))))...)))))))))......................................................
........................................................57.................................................................................................156................................................
SizePerfect hitTotal NormPerfect NormSRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		mjLiverWT1()
Liver Data. (liver)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		mjTestesWT4()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR206940(GSM723281)
other. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR037937(GSM510475)
293cand2. (cell line)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)		mjTestesWT2()
Testes Data. (testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)
............................................................GTAAAGGCTGGGCTGAGAcgtg............................................................................................................................22CGTG57.000.007.005.004.00-3.00-3.006.00-6.003.002.002.001.001.001.002.00--1.001.00-1.002.001.00---1.00------1.00-1.00-1.00---1.00---
............................................................GTAAAGGCTGGGCTGAGAcgt.............................................................................................................................21CGT57.000.008.009.008.005.007.007.003.002.00--1.00-1.00-1.00--1.00--1.002.00-------------------1.00-----
............................................................GTAAAGGCTGGGCTGAGAcg..............................................................................................................................20CG11.000.001.00--3.00-2.001.00-1.00-----------------1.00-----1.00-----1.00--------
............................................................GTAAAGGCTGGGCTGAGAcgtt............................................................................................................................22CGTT8.000.002.002.001.00------1.00-2.00-----------------------------------
..............................................................AAAGGCTGGGCTGAGAGGgcga..........................................................................................................................22GCGA6.002.001.001.001.00---1.00---------------1.00-------------------1.00----
..............................................................AAAGGCTGGGCTGAGAGGgcgt..........................................................................................................................22GCGT5.002.002.002.001.00--------------------------------------------
............................................................GTAAAGGCTGGGCTGAGAcga.............................................................................................................................21CGA4.000.00---1.001.00-----1.00--------------------1.00---------------
..............................................................AAAGGCTGGGCTGAGAGG..............................................................................................................................1812.002.00-1.00-----------1.00---------------------------------
............................................................GTAAAGGCTGGGCTGAGAagt.............................................................................................................................21AGT2.000.00-----------1.00-----------------1.00-----------------
............................................................GTAAAGGCTGGGCTGAGAcgag............................................................................................................................22CGAG2.000.00-1.001.00--------------------------------------------
............................................................GTAAAGGCTGGGCTGAGAGGt.............................................................................................................................21T2.000.00---1.00-1.00-----------------------------------------
............................................................GTAAAGGCTGGGCTGAGAcgc.............................................................................................................................21CGC2.000.00---2.00-------------------------------------------
............................................................GTAAAGGCTGGGCTGAaacg..............................................................................................................................20AACG2.000.00---2.00-------------------------------------------
............................................................GTAAAGGCTGGGCTGAGAGGtggc..........................................................................................................................24TGGC2.000.00-----------------1.00------------1.00----------------
............................................................GTAAAGGCTGGGCTGAGtcgt.............................................................................................................................21TCGT1.140.430.43-0.29-0.14-0.14-----------------0.14----------------------
..............................................................AAAGGCTGGGCTGAGAGGg.............................................................................................................................19G1.002.00------------------------------------1.00----------
............................................................GTAAAGGCTGGGCTGAGAcat.............................................................................................................................21CAT1.000.00------------1.00----------------------------------
............................................................GTAAAGGCTGGGCTGAGAGGtg............................................................................................................................22TG1.000.00---------------1.00-------------------------------
..................................................................GCTGGGCTGAGAGGACg...........................................................................................................................17G1.000.00---------------------------1.00-------------------
............................................................GTAAAGGCTGGGCTGAGAagtg............................................................................................................................22AGTG1.000.00-------------------1.00---------------------------
..............................................................AAAGGCTGGGCTGAGAGGgaga..........................................................................................................................22GAGA1.002.00------------------1.00----------------------------
............................................................GTAAAGGCTGGGCTGAGAGac.............................................................................................................................21AC1.000.00---1.00-------------------------------------------
..............................................................AAAGGCTGGGCTGAGAGGgggt..........................................................................................................................22GGGT1.002.00-1.00---------------------------------------------
............................................................GTAAAGGCTGGGCTGAGAcgga............................................................................................................................22CGGA1.000.00--1.00--------------------------------------------
............................................................GTAAAGGCTGGGCTGAGAtgt.............................................................................................................................21TGT1.000.00---1.00-------------------------------------------
............................................................GTAAAGGCTGGGCTGAGAagat............................................................................................................................22AGAT1.000.00----------------------------------1.00------------
............................................................GTAAAGGCTGGGCTGAt.................................................................................................................................17T1.000.00--------------------------------------------1.00--
............................................................GTAAAGGCTGGGCTGAGAtttg............................................................................................................................22TTTG1.000.00--------------1.00--------------------------------
............................................................GTAAAGGCTGGGCTGAGAcca.............................................................................................................................21CCA1.000.00--------1.00--------------------------------------
..............................................................AAAGGCTGGGCTGAGAGGgcat..........................................................................................................................22GCAT1.002.00------------------1.00----------------------------
............................................................GTAAAGGCTGGGCTGAGAagtt............................................................................................................................22AGTT1.000.00--1.00--------------------------------------------
..............................................................AAAGGCTGGGCTGAGAGGgctt..........................................................................................................................22GCTT1.002.00-------------1.00---------------------------------
..............................................................AAAGGCTGGGCTGAGAGGgcta..........................................................................................................................22GCTA1.002.001.00----------------------------------------------
..............................................................AAAGGCTGGGCTGAGAcgg.............................................................................................................................19CGG1.000.00--------1.00--------------------------------------
..................................................................GCTGGGCTGAGAGGAtga..........................................................................................................................18TGA1.000.00-----1.00-----------------------------------------
............................................................GTAAAGGCTGGGCTGAc.................................................................................................................................17C1.000.00----1.00------------------------------------------
............................................................GTAAAGGCTGGGCTGAGAGGgcga..........................................................................................................................24GCGA1.000.00----------------------------------------1.00------
....................................................................TGGGCTGAGAGGACActc........................................................................................................................18CTC1.000.00--------1.00--------------------------------------
............................................................GTAAAGGCTGGGCTGAGAct..............................................................................................................................20CT1.000.00----------1.00------------------------------------
...............................................................AAGGCTGGGCTGAGAGGccg...........................................................................................................................20CCG1.000.00-----1.00-----------------------------------------
............................................................GTAAAGGCTGGGCTGAGAc...............................................................................................................................19C1.000.00---------------------------------1.00-------------
............................................................GTAAAGGCTGGGCTGAGAGGtaa...........................................................................................................................23TAA1.000.00---------------1.00-------------------------------
...............................................................AAGGCTGGGCTGAGAGGgcga..........................................................................................................................21GCGA1.000.00------1.00----------------------------------------
............................................................GTAAAGGCTGGGCTGAGccgt.............................................................................................................................21CCGT0.710.430.140.140.140.140.14------------------------------------------
.............................................................................................ATGGACCCAGTAGATA.................................................................................................1620.500.50---------------------------------------------0.50-
............................................................GTAAAGGCTGGGCTGAG.................................................................................................................................1770.430.430.140.14-0.14-------------------------------------------
..............................................................................................TGGACCCAGTAGATA.................................................................................................1540.250.25----------------------------------------------0.25
............................................................GTAAAGGCTGGGCTGAGgctt.............................................................................................................................21GCTT0.140.43----------0.14------------------------------------
............................................................GTAAAGGCTGGGCTGAGcggt.............................................................................................................................21CGGT0.140.430.14----------------------------------------------
............................................................GTAAAGGCTGGGCTGAGtcat.............................................................................................................................21TCAT0.140.43----0.14------------------------------------------
............................................................GTAAAGGCTGGGCTGAGgtgt.............................................................................................................................21GTGT0.140.43-0.14---------------------------------------------
............................................................GTAAAGGCTGGGCTGAGtcgg.............................................................................................................................21TCGG0.140.43-----0.14-----------------------------------------
............................................................GTAAAGGCTGGGCTGAGcaat.............................................................................................................................21CAAT0.140.430.14----------------------------------------------
............................................................GTAAAGGCTGGGCTGAGcca..............................................................................................................................20CCA0.140.43-0.14---------------------------------------------
............................................................GTAAAGGCTGGGCTGAGgcgt.............................................................................................................................21GCGT0.140.43-0.14---------------------------------------------
GTTGGCATCATGTCACTTCAGGTTAGATGTACATGCTCTTGATGTACAGGGCATCATTTGGTAAAGGCTGGGCTGAGAGGACATCTTTGTTCCATGGACCCAGTAGATAGGCAGCTTCTGCTTCCAGGAACAACTTGTCTGTTTTTCAGTCTATCTACTTCCTAAAATTTCAATTTGCTCACATAGCACTTAAGAGAAGAGCTCTC
...........................................................(((....)))((((((((((((((...(((((((.((((...((((((.((....)))))))))))))))))))..)))))...)))))))))......................................................
........................................................57.................................................................................................156................................................
SizePerfect hitTotal NormPerfect NormSRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		mjLiverWT1()
Liver Data. (liver)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		mjTestesWT4()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR206940(GSM723281)
other. (brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR037937(GSM510475)
293cand2. (cell line)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)		mjTestesWT2()
Testes Data. (testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)
.....................................................................................................................................ggcGTCTGTTTTTCAGTCT...................................................... 19ggc1.000.00--------1.00--------------------------------------
.....................................................................................................................................cccGTCTGTTTTTCAGTCT...................................................... 19ccc1.000.00--------1.00--------------------------------------
.....................................................................................................................................tgcGTCTGTTTTTCAGTCT...................................................... 19tgc1.000.00--------1.00--------------------------------------
............................................................................................................caGCAGCTTCTGCTTCCAG............................................................................... 19ca1.000.00----1.00------------------------------------------
.....................................................................................................................................acgGTCTGTTTTTCAGTCT...................................................... 19acg1.000.00--------1.00--------------------------------------
...................................................................................................................................................tttaTATCTACTTCCTAAA........................................ 19ttta1.000.00-------------------------1.00---------------------
....................................................................................................................................................taCTATCTACTTCCTAA......................................... 17ta1.000.00-----1.00-----------------------------------------