ID: mmu-mir-1963
chr7:29868604-29868772 -
Display Libraries
(4)
AGO2.ip 		(2)
B-CELL 		(13)
BRAIN 		(7)
EMBRYO 		(4)
ESC 		(1)
KIDNEY 		(2)
OTHER 		(1)
OTHER.mut 		(3)
TESTES 		(5)
TOTAL-RNA
Showing top 43 reads
ATCAATCACTGCTGGAATGCTCCTGGTGTGTGCAGGAGAAGCAGGTCTGGATAGTAGGGCTGGGACGAGATCATGAGGCCTTCCTGGCCACTGGGAAGGACTCGGCCCTTGTCCCGCAGGTGATGGGTGTCTTTAGTGACGAGGATGTGAAGCAGATCCTGAAGATGAT
..........................................................((.((((((((....((((.(((((((((...))))))))).))))...))))))))))....................................................
.......................................................56.............................................................119................................................
SizePerfect hitTotal NormPerfect NormSRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		mjTestesWT4()
Testes Data. (testes)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR206942(GSM723283)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR206941(GSM723282)
other. (brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
............................................................TGGGACGAGATCATGAGGCCTTC......................................................................................23111.0011.002.00-1.002.00-3.001.00--------1.00----------------1.00----
.......................................................................................................................................GTGACGAGGATGTGAAGCAGA.............2118.008.00-8.00-----------------------------------
............................................................TGGGACGAGATCATGAGGCCTT.......................................................................................2216.006.001.00-2.001.00--1.00---------------------1.00--------
...........................................................................................................................................CGAGGATGTGAAGCAGgagt..........20GAGT5.000.00----2.00------------1.00---1.00-----------1.00---
.........................................................GGCTGGGACGAGATCATGAGGCCT........................................................................................2413.003.00----2.00---------------1.00----------------
...........................................................CTGGGACGAGATCATGAGGCCTTaa.....................................................................................25AA3.001.00--------2.00-1.00--------------------------
........................................................................................................................................TGACGAGGATGTGAAGata..............19ATA3.000.00---------3.00---------------------------
............................................................TGGGACGAGATCATGAGGCCT........................................................................................2113.003.00--1.00-----1.00-------------------------1.00--
............................................................TGGGACGAGATCATGAGGCC.........................................................................................2013.003.00------2.00--------------------1.00---------
............................................................TGGGACGAGATCATGAGGCCTTt......................................................................................23T2.006.001.00----1.00-------------------------------
................................................................................................AGGACTCGGCCCTTGTCCCGCAG..................................................2312.002.00------------1.00---1.00--------------------
...........................................................................................TGGGAAGGACTCGGCgc.............................................................17GC1.500.75-------0.25---0.25-0.750.25----------------------
...........................................................CTGGGACGAGATCATGAGGCCTTCatt...................................................................................27ATT1.001.001.00------------------------------------
............................................................TGGGACGAGATCATGAGGCCTTCat....................................................................................25AT1.0011.00-----------------------------1.00-------
...........................................................CTGGGACGAGATCATGAGGCa.........................................................................................21A1.000.00-------------------1.00-----------------
........................................................................................................................................TGACGAGGATGTGAAt.................16T1.000.00-------------1.00-----------------------
...........................................................................................................................................CGAGGATGTGAAGCAGgag...........19GAG1.000.00------------------1.00------------------
...........................................................CTGGGACGAGATCATGAGGCCTTa......................................................................................24A1.001.00------------------------------1.00------
............................................................TGGGACGAGATCATGAGGCCTTCt.....................................................................................24T1.0011.00--1.00----------------------------------
.........................................................GGCTGGGACGAGATCATGAGGggt........................................................................................24GGT1.000.00----------1.00--------------------------
................................................................................................................................GTCTTTAGTGACGAGGAT.......................1811.001.00--------------------------1.00----------
...........................................................................................................................................CGAGGATGTGAAGCAGgagc..........20GAGC1.000.00-----------------------1.00-------------
.......................................AGCAGGTCTGGATAGggc................................................................................................................18GGC1.000.00--------------1.00----------------------
...............................................................................................AAGGACTCGGCCCTTGTCCCGCAt..................................................24T1.000.001.00------------------------------------
...........................................................................................TGGGAAGGACTCGGCg..............................................................16G1.000.75-----------0.75------------------------0.25
..................................................................................................GACTCGGCCCTTGTCCCGCAGt.................................................22T1.000.00-------------------------------1.00-----
............................................................TGGGACGAGATCATGAGGC..........................................................................................1911.001.00---1.00---------------------------------
..............................TGCAGGAGAAGCAGGTCTGGtt.....................................................................................................................22TT1.000.00------------------------1.00------------
.........................................................................................................................................GACGAGGATGTGAAGattt.............19ATTT1.000.00----------------------1.00--------------
...........................................................CTGGGACGAGATCATGAGGCCTTC......................................................................................2411.001.001.00------------------------------------
...........................................................CTGGGACGAGATCATGAGGCCT........................................................................................2211.001.00--1.00----------------------------------
............................................................TGGGACGAGATCATGAGGCCTaa......................................................................................23AA1.003.00---1.00---------------------------------
.......................................................................................................................................GTGACGAGGATGTGAAGCAGATC...........2311.001.00------------1.00------------------------
..............................TGCAGGAGAAGCAGGattg........................................................................................................................19ATTG1.000.00-------1.00-----------------------------
...........................................................CTGGGACGAGATCATGAGGCCTT.......................................................................................2311.001.001.00------------------------------------
............................................................TGGGACGAGATCATGAGGCa.........................................................................................20A1.001.001.00------------------------------------
...................................................................................................................................................TGAAGCAGATCCTGAAGATGA.2111.001.00-------------------------1.00-----------
...........................................................................................TGGGAAGGACTCGGCgctc...........................................................19GCTC0.750.75-----------0.50-----------------------0.25-
...........................................................................................TGGGAAGGACTCGGC...............................................................1540.750.75-------0.75-----------------------------
...........................................................................................TGGGAAGGACTCGGCt..............................................................16T0.500.75-------0.25---0.25-------------------------
...........................................................................................TGGGAAGGACTCGGCact............................................................18ACT0.250.75-------0.25-----------------------------
...........................................................................................TGGGAAGGACTCGGCgct............................................................18GCT0.250.75-------0.25-----------------------------
...........................................................................................TGGGAAGGACTCGGCgccc...........................................................19GCCC0.250.75-----------0.25-------------------------
ATCAATCACTGCTGGAATGCTCCTGGTGTGTGCAGGAGAAGCAGGTCTGGATAGTAGGGCTGGGACGAGATCATGAGGCCTTCCTGGCCACTGGGAAGGACTCGGCCCTTGTCCCGCAGGTGATGGGTGTCTTTAGTGACGAGGATGTGAAGCAGATCCTGAAGATGAT
..........................................................((.((((((((....((((.(((((((((...))))))))).))))...))))))))))....................................................
.......................................................56.............................................................119................................................
SizePerfect hitTotal NormPerfect NormSRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		mjTestesWT4()
Testes Data. (testes)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR206942(GSM723283)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR206941(GSM723282)
other. (brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
....................................................................................................gttGGCCCTTGTCCCGCA................................................... 18gtt1.000.00-------1.00-----------------------------