ID: mmu-mir-1953
chr2:151793215-151793403 -
Display Libraries
(2)
AGO2.ip 		(2)
AGO3.ip 		(14)
B-CELL 		(7)
BRAIN 		(7)
CELL-LINE 		(18)
EMBRYO 		(6)
ESC 		(5)
FIBROBLAST 		(1)
KIDNEY 		(7)
LIVER 		(1)
LUNG 		(5)
LYMPH 		(16)
OTHER 		(7)
OTHER.mut 		(2)
PANCREAS 		(4)
PIWI.ip 		(3)
SKIN 		(10)
SPLEEN 		(22)
TESTES 		(4)
THYMUS 		(8)
TOTAL-RNA 		(1)
UTERUS
Showing top 102 reads
GCCATTACTGGAAGTGGTGGTGGGCTGGGCCAGGTTTGATTTCTCCCCCAGGTGCTGCCTGGTCTTGGGAAAGTTCTCAGGCTTCTGAGAATTTGCAGGAGCAGAAGGCTGTGAGGTTCCCCTCTTCCTGGCAGCCCTAAGATCTGGGGAGCCAGCTCTTCCATTGTTCTGCCTCCCCCGTGGTGTGAG
..................................................((....(((.((.(((.(((.((((((....((.....)).)))))).))).))).)).)))....))...................................................
............................................................61..................................................................129..........................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		GSM416732(GSM416732)
MEF. (cell line)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjTestesWT3()
Testes Data. (testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR073955(GSM629281)
total RNA. (blood)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		GSM475281(GSM475281)
total RNA. (testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR206939(GSM723280)
other. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR037901(GSM510437)
testes_rep2. (testes)		mjLiverWT3()
Liver Data. (liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR037926(GSM510464)
e9p5_rep4. (embryo)		SRR037911(GSM510448)
newborn_rep4. (total RNA)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
.................................................................TGGGAAAGTTCTCAGGCTTCTG......................................................................................................221442.00442.00376.002.001.001.001.001.004.00---1.00--1.00-1.00---2.002.00-2.00-4.003.001.003.00-3.002.004.00--1.00--3.001.00--3.00---2.002.00---1.00--2.001.00--2.00--1.001.00-1.00-----------1.00--------1.00--------1.00------1.00-----1.00----------------1.00-------------
.................................................................TGGGAAAGTTCTCAGGCTTCT.......................................................................................................211302.00302.0052.0036.0017.0014.0014.0014.002.009.007.007.00-3.008.008.00-8.008.008.007.004.001.008.00-3.001.001.00--4.00---2.001.002.006.002.002.00-1.00-2.002.00-2.00--1.003.001.002.00--1.002.00-2.00--1.001.001.00--1.00-3.00----2.002.00---1.00-2.00---1.00---1.001.00----------------1.001.00------1.00----1.00----1.00----1.00-----1.00---
.................................................................TGGGAAAGTTCTCAGGCTTCTGt.....................................................................................................23T238.00442.00166.00---1.00-4.001.001.00-4.001.00-------1.004.00-3.001.001.00--2.00---1.00-2.003.00-1.00-1.001.00--1.001.001.003.001.002.00-1.001.00---1.00--1.00-2.001.00-3.00-2.00-----1.00--1.002.001.00----2.00---------1.00--------1.00--1.00-----1.00-1.00--1.00--1.00-1.00--1.00---1.00-----1.00-----
.................................................................TGGGAAAGTTCTCAGGCTTCTGA.....................................................................................................231141.00141.0073.00-------1.005.005.003.00--2.00---1.00-2.00-3.00-1.00-4.00--4.00-1.00------1.002.00---1.00---1.001.001.00--------1.00--1.00-2.00-1.00-3.002.001.001.00--------1.00-----1.001.00-2.001.001.001.002.00--------1.00-1.00---1.00---1.00--1.00-------------1.00---1.00----
.................................................................TGGGAAAGTTCTCAGGCTTCTGAa....................................................................................................24A30.00141.0028.00----------------------------------------------------------------1.00----------------------------1.00------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTT.........................................................................................................19127.0027.0022.001.001.00----------------------------------------1.00-------------------------------------------1.00-----------------------------------------------1.00-
.................................................................TGGGAAAGTTCTCAGGCTTC........................................................................................................20122.0022.002.006.00-2.00---2.001.00---1.002.00---1.001.00----2.00------------1.00-------------------------------------------------------------------------------------------------1.00--
.......................................................................................................GAAGGCTGTGAGGTTCCCCTCT................................................................22119.0019.0010.00-----1.00------------------1.001.001.00------------------2.00----2.00---------------------------------------1.00---------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTt......................................................................................................22T14.00302.006.001.00-1.001.001.00---------1.00---------1.00--2.00------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGtt....................................................................................................24TT11.00442.008.00-1.00-----1.00----------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................GGAAAGTTCTCAGGCTTCTGt.....................................................................................................21T11.000.0011.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGtat...................................................................................................25TAT9.00442.005.00-------------1.00-------------------------------------------------------------1.00------2.00-----------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGAt....................................................................................................24T8.00141.00-3.00----1.00----------------1.00--------------1.001.00---------1.00---------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCT..........................................................................................................1818.008.003.00-2.00-------------------------1.00-1.00------------------------------------------------1.00---------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTat.....................................................................................................23AT8.00302.00-1.001.001.00----1.00-------1.00----------------1.00---------------------------------------------------1.00-----------1.00---------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGta....................................................................................................24TA7.00442.004.00-----1.00------------1.00---------------------------------------------1.00-----------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCa.......................................................................................................21A6.0022.00-1.00-1.00--------1.00--------------------1.00-------------------1.00-----------------------1.00-----------------------------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGGCTG..............................................................................2616.006.00--------------3.00------------------------------------------------------------------2.00------------------------------------------------1.00------
.................................................................TGGGAAAGTTCTCAGGCTTCTGAaga..................................................................................................26AGA5.00141.00----------------------------------------5.00------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGAGt...................................................................................................25T5.000.005.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................GGGAAAGTTCTCAGGCTTCTGt.....................................................................................................22T5.001.001.00-------------------------------3.00-----------------------------------------------------------------1.00--------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGGCT...............................................................................2514.004.00--------------2.00-------------------------------------1.00--1.00---------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTtt.....................................................................................................23TT4.00302.001.00------------------------2.00----------------------------------------------------------------------1.00----------------------------------------
................................................................TTGGGAAAGTTCTCAGGCTTCT.......................................................................................................2214.004.003.00--------------------------------------1.00-------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGAaa...................................................................................................25AA4.00141.002.00-------------1.00----------------------------------------------------------1.00---------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGAat...................................................................................................25AT4.00141.00----------2.00-------------------------1.00------------------1.00---------------------------------------------------------------------------------
......ACTGGAAGTGGTGGTGGGC....................................................................................................................................................................1913.003.003.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGc.....................................................................................................23C3.00442.001.00----------2.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGtaa...................................................................................................25TAA3.00442.00------------------------------1.00-------1.00----------------------------------------------------------------------------1.00---------------------
....................................................................................................................................AGCCCTAAGATCTGGGGAGC.....................................2013.003.003.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTaa.....................................................................................................23AA3.00302.00-------1.00----1.00---1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GAAGGCTGTGAGGTTCCCCTt.................................................................21T2.002.00---------------------------------1.00-----------------1.00-------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTa......................................................................................................22A2.00302.00-----------------1.00-------------------------1.00---------------------------------------------------------------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGGCTGTG............................................................................2812.002.00----------------------------------------------------------1.00------------------------------------------------------------1.00-----------------
.................................................................TGGGAAAGTTCTCAGGCTTgtg......................................................................................................22GTG2.0027.002.00----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GAAGGCTGTGAGGTTCCCCT..................................................................2012.002.00-1.00--------------------------------------------------1.00------------------------------------------------------------------------------------
..................................................................GGGAAAGTTCTCAGGCTTCTGA.....................................................................................................2212.002.002.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTta.....................................................................................................23TA2.00302.001.00-----------------------------------------1.00----------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGttt...................................................................................................25TTT2.00442.00---1.00------------------------------------------------------1.00------------------------------------------------------------------------------
..................................................................GGGAAAGTTCTCAGGCTTCT.......................................................................................................2012.002.00--------------------------------1.00---------------------------------------------------------------------------------------1.00----------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGGCTGT.............................................................................2712.002.00-----------------------------------------------------------------------------------------------1.00------------------------------1.00----------
.................................................................TGGGAAAGTTCTCAGGCTTCTGg.....................................................................................................23G2.00442.001.00-----------------------1.00----------------------------------------------------------------------------------------------------------------
..............................................................................AGGCTTCTGAGAATTTGC.............................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................GGGAAAGTTCTCAGGCTTCTta.....................................................................................................22TA1.002.001.00----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................AGGCTTCTGAGAATTTGCA............................................................................................1911.001.001.00----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GAAGGCTGTGAGGTTCCCCaa.................................................................21AA1.000.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------
................................................................TTGGGAAAGTTCTCAGGCTTgt.......................................................................................................22GT1.000.001.00----------------------------------------------------------------------------------------------------------------------------------------
................................................................TTGGGAAAGTTCTCAGGCTTCTa......................................................................................................23A1.004.00------------------------------------------------------------------------------------1.00----------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTtaa......................................................................................................22TAA1.0027.00------------------------------------1.00----------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCcgt.....................................................................................................23CGT1.0022.001.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTatg......................................................................................................22ATG1.0027.001.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTtg.....................................................................................................23TG1.00302.00----------------------------------------1.00------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGga....................................................................................................24GA1.00442.00------------------------------------------1.00----------------------------------------------------------------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGA....................................................................................2011.001.00------------------------------1.00----------------------------------------------------------------------------------------------------------
...........................................TCCCCCAGGTGCTGCtggt...............................................................................................................................19TGGT1.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCct.........................................................................................................19CT1.000.00-------------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................GGGAAAGTTCTCAGGCTTCTG......................................................................................................2111.001.001.00----------------------------------------------------------------------------------------------------------------------------------------
.........................................TCTCCCCCAGGTGCTGCtggg...............................................................................................................................21TGGG1.000.00----------------------------------------------------------------------------------------------------------------------------1.00------------
...........................................................TGGTCTTGGGAAAGTTCTCAGGCTTCTG......................................................................................................2811.001.00-----------------------------------------------1.00-----------------------------------------------------------------------------------------
.......................................................................................................GAAGGCTGTGAGGTTCCCCTC.................................................................2111.001.00-------------------------------------------------------------------------------------------------------------1.00---------------------------
........................................................................................GAATTTGCAGGAGCAGAAGGCTGTG............................................................................2511.001.00-------------------------------------------------------1.00---------------------------------------------------------------------------------
.......................................................................................................GAAGGCTGTGAGGTTCCCCTCTa...............................................................23A1.0019.00---------------------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGCCCTAAGATCTGGGcagc.....................................20CAGC1.000.001.00----------------------------------------------------------------------------------------------------------------------------------------
............................................................................................TTGCAGGAGCAGAAGtcgg..............................................................................19TCGG1.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------------------
..................................................................GGGAAAGTTCTCAGGCT..........................................................................................................1731.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................CAGAAGGCTGTGAGGTTCCCCT..................................................................2211.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCctct.......................................................................................................21CTCT1.000.001.00----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................ATTTGCAGGAGCAGAAGGCTGT.............................................................................2211.001.00--------------------------------------------1.00--------------------------------------------------------------------------------------------
.......................................................................................................GAAGGCTGTGAGGTTCCCCatt................................................................22ATT1.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTttgt.....................................................................................................23TTGT1.0027.001.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTata......................................................................................................22ATA1.0027.001.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGGatga.............................................................................27ATGA1.001.00----------------------------------------------------1.00------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGAc....................................................................................................24C1.00141.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCggt.....................................................................................................23GGT1.0022.001.00----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................GGCTGTGAGGTTCCCCTC.................................................................1811.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGGC................................................................................2411.001.00----------------------------------------------------1.00------------------------------------------------------------------------------------
...........................................................................................................GCTGTGAGGTTCCCCTCT................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGGCTGTGA...........................................................................2911.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------
........................................................................................GAATTTGCAGGAGCAGAAGGCTGTGAG..........................................................................2711.001.00--------------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGGCTTCTGAaat..................................................................................................26AAT1.00141.00--------------------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................TGGGAAAGTTCTCAGactt.........................................................................................................19ACTT1.000.001.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................TGAGAATTTGCAGGAGCAGAAGG.................................................................................2311.001.00-------------------------------------------------------1.00---------------------------------------------------------------------------------
..................................................................GGGAAAGTTCTCAGGCTTC........................................................................................................1920.500.50-0.50---------------------------------------------------------------------------------------------------------------------------------------
GCCATTACTGGAAGTGGTGGTGGGCTGGGCCAGGTTTGATTTCTCCCCCAGGTGCTGCCTGGTCTTGGGAAAGTTCTCAGGCTTCTGAGAATTTGCAGGAGCAGAAGGCTGTGAGGTTCCCCTCTTCCTGGCAGCCCTAAGATCTGGGGAGCCAGCTCTTCCATTGTTCTGCCTCCCCCGTGGTGTGAG
..................................................((....(((.((.(((.(((.((((((....((.....)).)))))).))).))).)).)))....))...................................................
............................................................61..................................................................129..........................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		GSM416732(GSM416732)
MEF. (cell line)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjTestesWT3()
Testes Data. (testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR073955(GSM629281)
total RNA. (blood)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		GSM475281(GSM475281)
total RNA. (testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR206939(GSM723280)
other. (brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR037901(GSM510437)
testes_rep2. (testes)		mjLiverWT3()
Liver Data. (liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR037926(GSM510464)
e9p5_rep4. (embryo)		SRR037911(GSM510448)
newborn_rep4. (total RNA)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
...................................................................GGAAAGTTCTCAGGCTTCTG...................................................................................................... 2014.004.004.00----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................TTCCCCTCTTCCTGGCAGCCCTA.................................................. 2313.003.003.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................aaGGAGCCAGCTCTTCCA.......................... 18aa2.000.00------------------------------------------------1.00--------------------------------------------------------------------------------1.00-------
......................................................................................................................CCCCTCTTCCTGGCAGCCCTAAGATCTGGGG........................................ 3112.002.002.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GTTCTGCCTCCCCCGTGGTG.... 2012.002.002.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................gcatCCAGCTCTTCCATTGT...................... 20gcat1.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................tatCCAGCTCTTCCATTG....................... 18tat1.000.00--------------------------------------------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................aaaCAGCTCTTCCATTGT...................... 18aaa1.000.00--------------------------------------------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................atCCAGCTCTTCCATTGT...................... 18at1.000.00---------------------------------------------------------------------1.00-------------------------------------------------------------------
........cgcgAGTGGTGGTGGGCTGGG................................................................................................................................................................ 21cgcg1.000.00----------------------------------------------------------------------------------1.00------------------------------------------------------
...........................................................................................................GCTGTGAGGTTCCCCTCTTCCTG........................................................... 2311.001.00---------------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................catCCAGCTCTTCCATTGT...................... 19cat1.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CAGCTCTTCCATTGTTCTGCCT............... 2211.001.00------------------------------1.00----------------------------------------------------------------------------------------------------------
...........................................................................................................GCTGTGAGGTTCCCCTCTTCCT............................................................ 2211.001.00--------------------------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TCTTCCATTGTTCTGCCTCCCCCGTG....... 2611.001.001.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................cTTGTTCTGCCTCCCCCGT........ 19c1.000.00-------------------------------------1.00---------------------------------------------------------------------------------------------------
..............................................................................................................GTGAGGTTCCCCTCTTCCT............................................................ 1911.001.001.00----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CTTCCATTGTTCTGCCT............... 1720.500.50----------------------------------------------------------------------------------------------------------------------------------------0.50
.............................................................................................................................TCCTGGCAGCCCTAAG................................................ 1670.430.43--------------------------------------------------------------------0.43--------------------------------------------------------------------
................................................................................................................................................................CCATTGTTCTGCCTCCCC........... 1830.330.33-------------------------------------------------0.33---------------------------------------------------------------------------------------