ID: mmu-mir-1907
chr15:50720521-50720710 -
Display Libraries
(1)
B-CELL 		(10)
BRAIN 		(1)
CELL-LINE 		(5)
EMBRYO 		(7)
ESC 		(2)
LYMPH 		(3)
OTHER 		(4)
OTHER.mut 		(1)
OVARY 		(4)
SPLEEN 		(8)
TESTES 		(1)
TOTAL-RNA 		(2)
UTERUS
Showing top 71 reads
AATCCCGATTTGCCAAAAAAAGAAGTTTCAGGCCGGTGCCCCCTCCCCCTCCCAGCCCCACTCCCCCTCGCTGTCTCTTGCTGGCTGATTTTAATTCTCTCCTACCGGGAGCAGCAGAGGATCTGGAGGTGGCTGGACCCGAGGGGCCGCCGCCGCCGCTGCTGCAAGTTTTCTGGGGGCTCCTGGCAAA
...................................................((((((...((((.((((((((.((((((.(((..((.........))..))).)))))))))).))))....))))..))))))......................................................
..................................................51.......................................................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT3()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR073955(GSM629281)
total RNA. (blood)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT2()
Testes Data. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
.....................................................................................................................AGGATCTGGAGGTGGCTG.......................................................1817.007.00------1.00-2.001.00----------------1.00--1.00----------1.00----
.......................................................................................................ACCGGGAGCAGCAGAGGA.....................................................................1817.007.003.00--------------------2.00--1.00------------------1.00-
.....................................................................................................................AGGATCTGGAGGTGGCTGG......................................................1917.007.00---3.00-2.00-------1.00----1.00--------------------------
......................................................................................GATTTTAATTCTCTCCTACCGGG.................................................................................2315.005.00-5.00-------------------------------------------
.................................................................................................................GCAGAGGATCTGGAGGTGGCTGGACC...................................................2614.004.004.00--------------------------------------------
.........................................................................................................CGGGAGCAGCAGAGGATCTGGAGGTGGC.........................................................2814.004.004.00--------------------------------------------
.......................................................................................................ACCGGGAGCAGCAGAGGATCTGG................................................................2313.003.00-3.00-------------------------------------------
....................................................................................................................GAGGATCTGGAGGTGGCTGG......................................................2012.002.00----------1.00-----1.00----------------------------
..................................................................................................................CAGAGGATCTGGAGGTGGCTGGAC....................................................2412.002.002.00--------------------------------------------
.............................................................................................ATTCTCTCCTACCGGGAGCAGCAG.........................................................................2412.002.00--2.00------------------------------------------
.....................................................................................................CTACCGGGAGCAGCAGAG.......................................................................1812.002.00--2.00------------------------------------------
...................................................................................................................................................................GCAAGTTTTCTGGGGGCTCCTGGCA..2512.002.00-----------------2.00---------------------------
.................................................................................................................................TGGCTGGACCCGAGGGGC...........................................1812.002.00--------------------------------1.00------1.00-----
...................................................................................................................AGAGGATCTGGAGGTGGCTGGACCC..................................................2512.002.00----2.00----------------------------------------
....................................................................................................CCTACCGGGAGCAGCAGAGGAT....................................................................2212.002.00----2.00----------------------------------------
.................................................................................................................GCAGAGGATCTGGAGGTG...........................................................1821.501.50------1.50--------------------------------------
...................................................................................................................AGAGGATCTGGAGGTGGC.........................................................1821.501.50--0.500.50-0.50---------------------------------------
.............................................................................................................AGCAGCAGAGGATCTGGA...............................................................1821.501.50---1.00-0.50---------------------------------------
...............................................................................................................CAGCAGAGGATCTGGAGGT............................................................1911.001.00----------------------1.00----------------------
.....................................................................................................................................................................AAGTTTTCTGGGGGCTCCT......1911.001.00----------1.00----------------------------------
................................................................................................CTCTCCTACCGGGAGCAGCAGA........................................................................2211.001.00--------------------1.00------------------------
.............CAAAAAAAGAAGTTTCAGGC.............................................................................................................................................................2011.001.001.00--------------------------------------------
...........................................................................................................................TGGAGGTGGCTGGACCCG.................................................1811.001.00------------------------------------1.00--------
.............................................................................................................AGCAGCAGAGGATCTGGctag............................................................21CTAG1.000.00-----1.00---------------------------------------
...........................................................................................................................................................................TCTGGGGGCTCCTGGCAA.1811.001.00----1.00----------------------------------------
..............................................................................................................................AGGTGGCTGGACCCGAGGGGCCGC........................................2411.001.00--------1.00------------------------------------
...........GCCAAAAAAAGAAGTTTCAGGCCGGTGC.......................................................................................................................................................2811.001.001.00--------------------------------------------
.......................................................................................................ACCGGGAGCAGCAGAGta.....................................................................18TA1.000.001.00--------------------------------------------
................................................................................................................................GTGGCTGGACCCGAGGGGC...........................................1911.001.00---------------1.00-----------------------------
........................................................................................................................ATCTGGAGGTGGCTGGACCCGA................................................2211.001.00-------------------------------1.00-------------
................AAAAAGAAGTTTCAGagct...........................................................................................................................................................19AGCT1.000.00--------------1.00------------------------------
...................................................................................................TCCTACCGGGAGCAGCAGAGGATCTGGA...............................................................2811.001.001.00--------------------------------------------
........................................................................................................CCGGGAGCAGCAGAGGATCTGGAGGTGG..........................................................2811.001.001.00--------------------------------------------
.....................................................................................................................................................................AAGTTTTCTGGGGGCTCCTGGC...2211.001.00--------------------1.00------------------------
.............................................................................................................AGCAGCAGAGGATCTGca...............................................................18CA1.000.00---1.00-----------------------------------------
.......................................................................................................................GATCTGGAGGTGGCTGGACCCGA................................................2311.001.00----------------------------1.00----------------
......................................................................................................TACCGGGAGCAGCAGActtt....................................................................20CTTT1.000.00-----------------------------------1.00---------
.................................................................................................................GCAGAGGATCTGGAGGTGGCTG.......................................................2211.001.00-------------------1.00-------------------------
.......................................................................................................ACCGGGAGCAGCAGAtga.....................................................................18TGA1.000.001.00--------------------------------------------
.........................................................................................................CGGGAGCAGCAGAGGATCTGGAG..............................................................2311.001.00-------------1.00-------------------------------
.................................................................................................................GCAGAGGATCTGGAGGcg...........................................................18CG1.000.00------1.00--------------------------------------
...........................................................................................................GGAGCAGCAGAGGATCTGGAGG.............................................................2211.001.00--1.00------------------------------------------
.....................................................................................................................AGGATCTGGAGGTGGCTGt......................................................19T1.007.00------------------1.00--------------------------
............................................................................................................................................................CGCTGCTGCAAGTTTTCTGG..............2011.001.00-----------------------1.00---------------------
.............................................................................................................................GAGGTGGCTGGACCCGAGGGG............................................2111.001.00----------------------------------1.00----------
.....................................................................................................CTACCGGGAGCAGCAGAGGATCTG.................................................................2411.001.00----------------1.00----------------------------
...................................................................................................................AGAGGATCTGGAGGTGGCTG.......................................................2011.001.00---------------1.00-----------------------------
.......................................................................................................ACCGGGAGCAGCAGAGGATCTG.................................................................2211.001.00---------------------------------1.00-----------
..........................................................................................................................CTGGAGGTGGCTGGACCCG.................................................1911.001.00-----------1.00---------------------------------
............................................................................................................................GGAGGTGGCTGGACCCGAGG..............................................2011.001.00-----------1.00---------------------------------
................................................................................................CTCTCCTACCGGGAGCAGCAGAGGAT....................................................................2611.001.00-------------------------------------1.00-------
...................................................................................................................................................CGCCGCCGCCGCTGCaggc........................19AGGC1.000.00---------------------------1.00-----------------
..........................................................................................................................CTGGAGGTGGCTGGACCC..................................................1820.500.50--------------------------------------------0.50
AATCCCGATTTGCCAAAAAAAGAAGTTTCAGGCCGGTGCCCCCTCCCCCTCCCAGCCCCACTCCCCCTCGCTGTCTCTTGCTGGCTGATTTTAATTCTCTCCTACCGGGAGCAGCAGAGGATCTGGAGGTGGCTGGACCCGAGGGGCCGCCGCCGCCGCTGCTGCAAGTTTTCTGGGGGCTCCTGGCAAA
...................................................((((((...((((.((((((((.((((((.(((..((.........))..))).)))))))))).))))....))))..))))))......................................................
..................................................51.......................................................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT3()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR073955(GSM629281)
total RNA. (blood)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT2()
Testes Data. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
.............................................................................TTGCTGGCTGATTTTAATTCTCTCCTACCGGG................................................................................. 3213.003.003.00--------------------------------------------
...........................................................ACTCCCCCTCGCTGTCTCTTG.............................................................................................................. 2112.002.002.00--------------------------------------------
..................................................................................GGCTGATTTTAATTCTCTCCTACCGGG................................................................................. 2712.002.00------------2.00--------------------------------
...........................................................................................................................................ccccGGGCCGCCGCCGCCGCTG............................. 22cccc1.000.00-------1.00-------------------------------------
...........................................................................................................................................acccGGGCCGCCGCCGCCGCTG............................. 22accc1.000.00-------1.00-------------------------------------
........................................gagaCCCCCTCCCAGCCCC................................................................................................................................... 19gaga1.000.00---------1.00-----------------------------------
....................................aataCCCTCCCCCTCCCAG....................................................................................................................................... 19aata1.000.00-------------------1.00-------------------------
..................................................................................................................................................cgtCCGCCGCCGCTGCTGC......................... 19cgt1.000.00-------------------------1.00-------------------
.....................................................................................................................AGGATCTGGAGGTGGCTGGACCCG................................................. 2411.001.00--------------1.00------------------------------
..................................ttTGCCCCCTCCCCCTCC.......................................................................................................................................... 18tt1.000.00------------------------------------------1.00--
............................................................CTCCCCCTCGCTGTCTCTTGCTGG.......................................................................................................... 2411.001.001.00--------------------------------------------
..........................agacGGCCGGTGCCCCCTCC................................................................................................................................................ 20agac1.000.00---------1.00-----------------------------------
...........................................................................................................................................aGAGGGGCCGCCGCCGC.................................. 17a1.000.00--------------------------------------1.00------
................................................cgatCAGCCCCACTCCCCC........................................................................................................................... 19cgat1.000.00-----------------------------------------1.00---
.............................................................................................................................................ttccGCCGCCGCCGCCGCTGCT........................... 22ttcc1.000.00-------1.00-------------------------------------
..........................................actgCCCTCCCAGCCCCACT................................................................................................................................ 20actg1.000.00----------------------1.00----------------------
....................................................tAGCCCCACTCCCCCTC......................................................................................................................... 17t1.000.00----------1.00----------------------------------
............................................................................................................................................tcGGGGCCGCCGCCGCCG................................ 18tc1.000.00------------------------------1.00--------------
........................................gcgcCCCCCTCCCAGCCCC................................................................................................................................... 19gcgc1.000.00--1.00------------------------------------------