ID: mmu-mir-1896
chr13:21536979-21537159 +
Display Libraries
(1)
AGO2.ip 		(3)
B-CELL 		(3)
BRAIN 		(6)
EMBRYO 		(4)
ESC 		(3)
LIVER 		(2)
OTHER 		(1)
OTHER.mut 		(1)
PIWI.mut 		(1)
SPLEEN 		(14)
TESTES
Showing top 43 reads
TTTCTCCAGTGTGAATCCTATGATGTCGAATAAGGTCGGAGGTCAAGCTGAAGGCTTTCCCACACTCATTACAGTGATGTCTTTTGGAACGACCATGGACTCTCTGATGGTGGGTGAGGAGGAGGGCCCGACTAAAGGTTTTCCCACACTCCTTGCATTCTCGGGGCTCATCCTGACTGTG
....................................................((((((((..((((((((((((.((.((((..(((.....))).)))))).))).)))))))))....)))))))).....................................................
..................................................51..............................................................................131................................................
SizePerfect hitTotal NormPerfect NormSRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT3()
Testes Data. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		mjTestesWT2()
Testes Data. (testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR206942(GSM723283)
other. (brain)
..............................TAAGGTCGGAGGTCAAGCTGAAGGC..............................................................................................................................2511.001.00----------------------------1.00-------
.....................................................................TACAGTGATGTCTTTTGGgtg...........................................................................................21GTG1.000.00----------------1.00-------------------
.............................ATAAGGTCGGAGGTCAgga.....................................................................................................................................19GGA1.000.00-------------1.00----------------------
............................................AAGCTGAAGGCTTTCCCACACTCATTACA............................................................................................................2911.001.00------------------------------1.00-----
...................................................................ATTACAGTGATGTCTTTTGGAACGACC.......................................................................................2711.001.00--------------------------1.00---------
...............TCCTATGATGTCGAATAAGGTCGGAGG...........................................................................................................................................2711.001.00------1.00-----------------------------
....................TGATGTCGAATAAGGTCGGAGGTCA........................................................................................................................................2511.001.00-----------------1.00------------------
TTTCTCCAGTGTGAATCCTATGATGTCGAATAAGGTCGGAGGTCAAGCTGAAGGCTTTCCCACACTCATTACAGTGATGTCTTTTGGAACGACCATGGACTCTCTGATGGTGGGTGAGGAGGAGGGCCCGACTAAAGGTTTTCCCACACTCCTTGCATTCTCGGGGCTCATCCTGACTGTG
....................................................((((((((..((((((((((((.((.((((..(((.....))).)))))).))).)))))))))....)))))))).....................................................
..................................................51..............................................................................131................................................
SizePerfect hitTotal NormPerfect NormSRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT3()
Testes Data. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		mjTestesWT2()
Testes Data. (testes)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR206942(GSM723283)
other. (brain)
.....................................................................................................................................AAAGGTTTTCCCACACTCCTTGC......................... 2312.002.001.00---------------------1.00-------------
........................................................................................................................................GGTTTTCCCACACTCCTTGC......................... 2012.002.001.00------------------1.00----------------
.......AGTGTGAATCCTATGATGTCGAAT...................................................................................................................................................... 2412.002.00-1.00--1.00-------------------------------
.....................................................................................................................................attGGTTTTCCCACACTCC............................. 19att1.000.00----1.00-------------------------------
.............................................................................................................GTGGGTGAGGAGGAGGGCCCGACTAA.............................................. 2611.001.00-------1.00----------------------------
.............................................................................................CATGGACTCTCTGATGGTGGGTGAGGA............................................................. 2711.001.00--1.00---------------------------------
................................................................................................................................................CACACTCCTTGCATTCTCGGGGCTCA........... 2611.001.00--1.00---------------------------------
.............................................................................................................................................TCCCACACTCCTTGCATTCT.................... 2011.001.00-----1.00------------------------------
...........................................................................................................................................................CATTCTCGGGGCTCATCCTGACT... 2311.001.00------------------------1.00-----------
......................................................................................................................................aaaaTTTTCCCACACTCCT............................ 19aaaa1.000.00---------1.00--------------------------
..............................TAAGGTCGGAGGTCAAGCTGA.................................................................................................................................. 2111.001.00-----------------------1.00------------
.................................................................................................................................GACTAAAGGTTTTCCCAC.................................. 1811.001.00--------------1.00---------------------
..TCTCCAGTGTGAATCCTATG............................................................................................................................................................... 2011.001.00-----------1.00------------------------
......CAGTGTGAATCCTATGATGTCGAATAA.................................................................................................................................................... 2711.001.00-------------------------1.00----------
........................................................................................ACGACCATGGACTCTCTGATGGT...................................................................... 2311.001.00-----------------------------1.00------
...................................................................................................................................................ACTCCTTGCATTCTCGGGGCTC............ 2211.001.00-1.00----------------------------------
...........................................................................................................................................aTTCCCACACTCCTTGC......................... 17a1.000.00-----1.00------------------------------
................................................................................CTTTTGGAACGACCATGGACTCTCT............................................................................ 2511.001.00--------------------------------1.00---
........................................................................AGTGATGTCTTTTGGAACGACCAT..................................................................................... 2411.001.001.00-----------------------------------
..................TATGATGTCGAATAAGGTCGGAGGTCAA....................................................................................................................................... 2811.001.00---1.00--------------------------------
.........................................................................................................................................aaTTTCCCACACTCCTTGCA........................ 20aa1.000.00-------------------------------1.00----
.........TGTGAATCCTATGATGTCGAATAAGGTCG............................................................................................................................................... 2911.001.00---------------------1.00--------------
...............................................................................................................................................................tTCGGGGCTCATCCTGACTGTG 22t1.000.00--------------------1.00---------------
...............................................................................................................................................................CTCGGGGCTCATCCTGACTGT. 2111.001.00---------------------------1.00--------
...........TGAATCCTATGATGTCGAATAAGGTCGGA............................................................................................................................................. 2911.001.00---1.00--------------------------------
....................................................................................................................AGGAGGAGGGCCCGACTAAA............................................. 2011.001.00---------------1.00--------------------
...........................................................................................................................................tctaCCACACTCCTTGCATTCTC................... 23tcta1.000.00------------------1.00-----------------
...........................................................................................ACCATGGACTCTCTGATGGTGGGTGAGGA............................................................. 2911.001.00--------1.00---------------------------
......................................................................................................................................AAGGTTTTCCCACACTCCTTGCATTCT.................... 2711.001.00----------1.00-------------------------
..............................................................................................................................................................TCTCGGGGCTCATCCTGACTGT. 2211.001.00------------1.00-----------------------
......................................................................................................................................AAGGTTTTCCCACACTCCTT........................... 2050.800.80-0.60--------------------------------0.20-
...............................................CTGAAGGCTTTCCCACACTCATTACA............................................................................................................ 2630.670.67--0.33---0.33-----------------------------
................................................TGAAGGCTTTCCCACACTCATTACA............................................................................................................ 2540.500.50-------0.250.25---------------------------
........................................................................................................................................GGTTTTCCCACACTCCT............................ 1770.290.29---------------------------------0.29--
.................................................GAAGGCTTTCCCACACTCATT............................................................................................................... 2150.200.20-0.20----------------------------------
............................................................................................................................................TTCCCACACTCCTTGCA........................ 1780.120.12---------0.12--------------------------