ID: mmu-mir-1893
chr18:6490512-6490694 -
Display Libraries
(13)
AGO2.ip
(9)
B-CELL
(20)
BRAIN
(1)
CELL-LINE
(1)
DCR.mut
(11)
EMBRYO
(11)
ESC
(5)
FIBROBLAST
(3)
HEART
(7)
LIVER
(4)
LYMPH
(12)
OTHER
(11)
OTHER.mut
(1)
PANCREAS
(8)
PIWI.ip
(3)
PIWI.mut
(1)
SKIN
(9)
SPLEEN
(37)
TESTES
(4)
THYMUS
(1)
UTERUS
Showing top 220 reads
GGAGACCGAAACTCCGGTTCTCCATGATCCCGCTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATCTGCTGCGCCTGAGATGAGTAAACTGTCGTTTCGGGCGCGGGCGCTGGACGCCTCGAAGCCGCTGCCGGTCTTCCGCTGTGAGGATCTGCCCGACCTGCACGAATACGCCTCGATA
..................................................(((((((((((((........))))))))))))).((((.....))))...((((((....))).)))..................................................
........................................................................73.................................................................140.........................................
SizePerfect hitTotal NormPerfect NormmjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)
SRR059773(GSM562835)
CD4_Dicer. (spleen)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
mjLiverWT2()
Liver Data. (liver)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
mjTestesWT3()
Testes Data. (testes)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM179088(GSM179088)
Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
RuiDcrKO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dicer skin)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR073955(GSM629281)
total RNA. (blood)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM314558(GSM314558)
ESC wild type (454). (ESC)
SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR206942(GSM723283)
other. (brain)
GSM475281(GSM475281)
total RNA. (testes)
SRR206941(GSM723282)
other. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
.............................................................................................................................................................CCGACCTGCACGAATggcg.......19GGCG120.003.00----4.003.00-19.00-13.005.007.009.002.001.00-1.001.005.00-7.00----3.001.00-1.00------1.00-3.001.00--1.001.001.002.00--3.00-------3.00---1.003.00-----2.00-------2.00-2.00-1.00---2.002.001.00------------1.00-----------------------1.00-1.00-1.00-----1.001.00---
.............................................................................................................................................................CCGACCTGCACGAATggc........18GGC107.003.0040.00---12.002.00-1.00-5.0010.005.00-2.004.001.00-2.003.00---1.00--3.00--1.001.00----2.00---1.00--1.00-2.00---------3.00---------1.00--------1.00------------------1.00-------1.00----------------------------------1.00-
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGTC.............................................26161.0061.00-18.0014.003.00--9.00-9.00-------2.00--1.00---------3.00--2.00-------------------------------------------------------------------------------------------------------
.............................................................................TGAGATGAGTAAACTGTCGTTTCGGGC...............................................................................27135.0035.00-9.0010.006.00--1.00-2.00------------1.00--------1.00--------1.00----------1.00----------------------------------1.00-----------------------------1.00--------1.00-----------
.............................................................................................................................................................CCGACCTGCACGAATgg.........17GG20.003.00----1.006.00---1.00--1.003.00---2.00------2.00--3.00-----------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATggca.......19GGCA18.003.0013.00----2.00-------1.00---1.00------------------------1.00---------------------------------------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGTAAACTG..........................................................................................27110.0010.00---2.00--2.00-3.00----------1.00------------------------------1.00------------------------------------1.00------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGTAAACTGT.........................................................................................2819.009.00---3.00----1.00----------2.00------------1.00-------1.00---------1.00-------------------------------------------------------------------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGTCT............................................2718.008.00-1.004.00---1.00-2.00-------------------------------------------------------------------------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGT................................................................................................2115.005.00-----------------------5.00----------------------------------------------------------------------------------------------------------------
.................................................................ATCTGCTGCGCCTGAGATGAGT................................................................................................2215.005.00-------------1.00------------1.00-1.00---------1.00------------------1.00------------------------------------------------------------------------------
...........................................................AGAGGTATCTGCTGCGCCTGAGATGA..................................................................................................2615.005.00-1.00---------------------------------------------------------1.00--1.00-------------------------------1.00--------------------------------------1.00--
..................................................................TCTGCTGCGCCTGAGATGAGTAAACTGTC........................................................................................2915.005.00--2.001.00-----------------------------------------------------------------------------------------2.00------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATg..........16G5.003.00-----2.00------2.00---------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGG...............................................2415.005.00------4.00---------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................GCTGGACGCCTCGAAGCCG......................................................1915.005.00---------------------------3.00------------------------1.00----------------1.00------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATggt........18GGT5.003.00---------1.00---1.00---------------------------2.00----------1.00-----------------------------------------------------------------------------------
..................................................................................TGAGTAAACTGTCGTTTCGGGCGCG............................................................................2513.003.00--1.001.00----------------------------1.00-------------------------------------------------------------------------------------------------------
...........................................................AGAGGTATCTGCTGCGCCTGAGATG...................................................................................................2513.003.00--------------1.00-1.00---------------------------------------------1.00-------------------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGTAAACT...........................................................................................2613.003.00-1.00---------------------------------------------------------------------------------------1.00--------------------------------------1.00-------
.............................................................................................................................................................CCGACCTGCACGAAT...........1513.003.00-----2.00--------------------------------------1.00-------------------------------------------------------------------------------------------
...........................................................AGAGGTATCTGCTGCGCCTGAGA.....................................................................................................2313.003.00-----------------------------------------------------------1.00--1.00--------------------------------------1.00----------------------------------
.............................................................................TGAGATGAGTAAACTGTCGTTTCGGGCG..............................................................................2813.003.00--1.001.00----------------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................CTGTCGTTTCGGGCGCGGGC.........................................................................2013.003.00------------------------------3.00---------------------------------------------------------------------------------------------------------
..........................................................................................CTGTCGTTTCGGGCGCGGGCG........................................................................2113.003.00------------------------------------------------------3.00---------------------------------------------------------------------------------
.......................................................................................................CGCGGGCGCTGGACGCCTCGAAGCCGC.....................................................2712.002.00------2.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................GCTGCGCCTGAGATGAGT................................................................................................1812.002.00-----------------1.00----------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................GCGCTGGACGCCTCGAAGCCGCTG...................................................2412.002.00---------------------------------1.00-----------------------------------------------------------------------------------1.00------------------
.............................................................................................................................................................CCGACCTGCACGAATgga........18GGA2.003.00---------------------------------------------------------------------------------2.00------------------------------------------------------
........................................................................................................................................................TCTGCCCGACCTGCACGAATACGCCTC....2712.002.00--1.00---1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................TGAGTAAACTGTCGTTTCGGGCGC.............................................................................2412.002.00-------------------1.00--------------------------------------------------1.00-----------------------------------------------------------------
.............................................TTTCCCCAGAGCGGAGAGGTA.....................................................................................................................2112.002.00-----2.00----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGTa.............................................26A2.002.00-1.00----1.00---------------------------------------------------------------------------------------------------------------------------------
.............................................................................TGAGATGAGTAAACTGTCGTTTCGGG................................................................................2612.002.00-2.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................CTGCGCCTGAGATGAGTAAACTGT.........................................................................................2412.002.00--------------2.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................GCTGGACGCCTCGAAGCCGCTG...................................................2212.002.00---------------------------------------------1.00---------------------------------1.00--------------------------------------------------------
..............................................................................GAGATGAGTAAACTGTCGTT.....................................................................................2012.002.00-----------------------------------2.00----------------------------------------------------------------------------------------------------
......................................................................................................GCGCGGGCGCTGGACGCCTCGAAGCC.......................................................2612.002.00------------------------2.00---------------------------------------------------------------------------------------------------------------
............................................................................................GTCGTTTCGGGCGCGGGCGCTG.....................................................................2212.002.00-----------------------2.00----------------------------------------------------------------------------------------------------------------
...................................GCCGGGGCCGTTTCCCCAGAGCGGA...........................................................................................................................2512.002.00----------------------------------------------------------------------------------------2.00-----------------------------------------------
.............................................................................................TCGTTTCGGGCGCGGGCG........................................................................1812.002.00-------------------------------------------------------------2.00--------------------------------------------------------------------------
...............................................................................................................CTGGACGCCTCGAAGCCG......................................................1812.002.00---------------------1.00--------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGT..............................................2512.002.00-1.00-----------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................ATGAGTAAACTGTCGTTTCGGG................................................................................2212.002.00---------------------------------------------------------------2.00------------------------------------------------------------------------
.......................................................................................AAACTGTCGTTTCGGGCGCG............................................................................2012.002.00----------------1.00---------------------------------------1.00-------------------------------------------------------------------------------
............................................................................CTGAGATGAGTAAACatgg........................................................................................19ATGG1.000.00------------------------------------------------------------------------------------------1.00---------------------------------------------
.....................................................................................................GGCGCGGGCGCTGGACGCCTCGA...........................................................2311.001.00---------------------------------------------------------1.00------------------------------------------------------------------------------
................................................................................GATGAGTAAACTGTCGTTTCGGGCGC.............................................................................2611.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------
........................................................CGGAGAGGTATCTGCTG..............................................................................................................1711.001.00----------------1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................AACTGTCGTTTCGGGCG..............................................................................1711.001.00--------------------------------------------------------------------------------------------------------1.00-------------------------------
............................................................................................................................................................CCCGACCTGCACGAATACGCCTCG...2411.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------------
.............................................................................................................................................CGCTGTGAGGATCTGCCCGAC.....................2111.001.00-------------------------------------------------------------------------1.00--------------------------------------------------------------
.........................................................................................................................CGAAGCCGCTGCCGGTCTT...........................................1911.001.00-------------------------------------------------------------------------1.00--------------------------------------------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGTt.............................................26T1.002.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GGCGCGGGCGCTGGACGC................................................................1811.001.00------------------------------------------------------------------------------------------------------------------1.00---------------------
............................................................................................................................................................CCCGACCTGCACGAATggcg.......20GGCG1.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................ATCTGCCCGACCTGCACGAA............2011.001.00---------------------------------------------------------------------------1.00------------------------------------------------------------
..............................................................................GAGATGAGTAAACTGgt........................................................................................17GT1.000.00-------------------------------------------------------------------------------------------------------------1.00--------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGtc..............................................25TC1.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................GCTGGACGCCTCGAAGCCGCTGC..................................................2311.001.00---------------------------------------------1.00------------------------------------------------------------------------------------------
..............................................................................................................GCTGGACGCCTCGAAGCCGCT....................................................2111.001.00------------------------------------------------------------------------------------------------1.00---------------------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGTCa............................................27A1.0061.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.............................................................AGGTATCTGCTGCGCCTGA.......................................................................................................1911.001.00--------------------------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................ATGAGTAAACTGTCGTTTCGGGC...............................................................................2311.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................AGGTATCTGCTGCGCCTGAGATGAGTA...............................................................................................2711.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................GCGGGCGCTGGACGCCTCGAAGCCGC.....................................................2611.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGGCGCTGGACGCCTCGAAGCCGCTGC..................................................2811.001.00------------------------------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................CGCTGTGAGGATCTGga.........................17GA1.000.00------------------------------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................GCTGGACGCCTCGAAGCC.......................................................1811.001.00--------------------------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................CTGGACGCCTCGAAGCCGCTG...................................................2111.001.00----------------------------------------------------------------------------------------------------------------------------------1.00-----
.............................................................................TGAGATGAGTAAACTGTCGTTTCGGGag..............................................................................28AG1.002.00-----------------------------------------------------------------------1.00----------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGTAAACTGTCGT......................................................................................3111.001.00---------------------------------------1.00------------------------------------------------------------------------------------------------
....................................................................................................................CGCCTCGAAGCCGCTGCCGGTCTTCCGC.......................................2811.001.00-----------------------------1.00----------------------------------------------------------------------------------------------------------
......................................................................CTGCGCCTGAGATGAGTAAACTGTCG.......................................................................................2611.001.00---------------------------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATggtg.......19GGTG1.003.00-------------1.00--------------------------------------------------------------------------------------------------------------------------
........................................................................................AACTGTCGTTTCGGGat..............................................................................17AT1.000.00------------------------------------------------------------------------------------------------------------1.00---------------------------
.............................................................................................................CGCTGGACGCCTCGAAGCCGCTG...................................................2311.001.00-------------------------------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................CCCGACCTGCACGAATggc........19GGC1.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATcgta.......19CGTA1.003.00--------------------------1.00-------------------------------------------------------------------------------------------------------------
......................................................AGCGGAGAGGTATCTGCTGCGCCTGA.......................................................................................................2611.001.00--------------------------------------------------------------------------------------------------------------1.00-------------------------
............................................................GAGGTATCTGCTGCGCCTGAGATGA..................................................................................................2511.001.00----------------------------------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................CGTTTCGGGCGCGGGC.........................................................................1611.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------
...................................................................................GAGTAAACTGTCGTTTCGGG................................................................................2011.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
......................................................................................TAAACTGTCGTTTCGGGCG..............................................................................1911.001.00-------------------------------------------------------------1.00--------------------------------------------------------------------------
...............................................TCCCCAGAGCGGAGAGGTATCTGCTGC.............................................................................................................2711.001.00------------------------------------------1.00---------------------------------------------------------------------------------------------
....................................................................................AGTAAACTGTCGTTTCGGGCGCGG...........................................................................2411.001.00------------------------------------1.00---------------------------------------------------------------------------------------------------
...........................................................AGAGGTATCTGCTGCGCCTGAGAT....................................................................................................2411.001.00----------------------------------------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATACGCCTCGATA2611.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.............................................................................TGAGATGAGTAAACTGTCGTTTCGG.................................................................................2511.001.00--------------------------------------------------------------------------------------------------------------------------1.00-------------
............................................................................................................GCGCTGGACGCCTCGAAGCCG......................................................2111.001.00----------------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................GCCTGAGATGAGTAAACT...........................................................................................1811.001.00------------------------------------------1.00---------------------------------------------------------------------------------------------
......................................................................................TAAACTGTCGTTTCGGGCGCGGGCGCTG.....................................................................2811.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................TTCGGGCGCGGGCGCTGGAC..................................................................2011.001.00-------------------------------------------------------------------1.00--------------------------------------------------------------------
.....................................................................GCTGCGCCTGAGATGAGTAAAC............................................................................................2211.001.00------------------------------------------------------------------------------------------1.00---------------------------------------------
..........................................................................GCCTGAGATGAGTAAACTGTCGTT.....................................................................................2411.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------
...............................................................................AGATGAGTAAACTGTCGTTTCGGGCGC.............................................................................2711.001.00--------------------------------------------------------------------------------------------1.00-------------------------------------------
...........................................CGTTTCCCCAGAGCGGAGAGGT......................................................................................................................2211.001.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
........................................................................................................................TCGAAGCCGCTGCCGGTCTTCCGCTGTGA..................................2911.001.00-----------------------------------------------------------------1.00----------------------------------------------------------------------
.......................................................................................AAACTGTCGTTTCGGGCGCcggc.........................................................................23CGGC1.000.00---------------1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................AGTAAACTGTCGTTTCGGGCGCGGGC.........................................................................2611.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................GGGCGCTGGACGCCTCGAAGCCG......................................................2311.001.00----------------------------------1.00-----------------------------------------------------------------------------------------------------
................................................................................GATGAGTAAACTGTCGTTTCGG.................................................................................2211.001.00-------------------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................CGGGCGCGGGCGCTGGACGCCTCGAAGCC.......................................................2911.001.00---------------------------------1.00------------------------------------------------------------------------------------------------------
............................................................................CTGAGATGAGTAAACTGTCG.......................................................................................2011.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................GCTGCGCCTGAGATGAG.................................................................................................1711.001.00---------------------------------------------------------------------------------------------------------------1.00------------------------
.............................................................................................................................................................CCGACCTGCACGAATACGCCTCG...2311.001.00----------------------------------------------------------------1.00-----------------------------------------------------------------------
..................................................................................................TCGGGCGCGGGCGCTGGACGCC...............................................................2211.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATtgca.......19TGCA1.003.001.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................GAGAGGTATCTGCTGCGCCTGAGAT....................................................................................................2511.001.00----------------------------------------------------------------------------------------------------------1.00-----------------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGTg.............................................26G1.002.00----------------------------------------1.00-----------------------------------------------------------------------------------------------
........................................................................................AACTGTCGTTTCGGGCGCGG...........................................................................2011.001.00------------------------------------1.00---------------------------------------------------------------------------------------------------
............................................................................................................GCGCTGGACGCCTCGAAGCCGC.....................................................2211.001.00------------------------------------------------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................TTCCGCTGTGAGGATCTGCC.........................2011.001.00---------------------------------------------------1.00------------------------------------------------------------------------------------
............................................GTTTCCCCAGAGCGGAGAGG.......................................................................................................................2011.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
...........................................................AGAGGTATCTGCTGCGCCTGA.......................................................................................................2111.001.00-------------------------------------------------------------------------------------------------------------------------------1.00--------
............................................................................................................................AGCCGCTGCCGGTCTTCCG........................................1911.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................................TGTCGTTTCGGGCGCGGGCGCT......................................................................2211.001.00--------------------------------------------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATggag.......19GGAG1.003.00---------1.00------------------------------------------------------------------------------------------------------------------------------
......................................................................CTGCGCCTGAGATGAGTAAACT...........................................................................................2211.001.00---------------------------------1.00------------------------------------------------------------------------------------------------------
.....................................................................................GTAAACTGTCGTTTCGGGCGCGGGC.........................................................................2511.001.00-------------------------------1.00--------------------------------------------------------------------------------------------------------
..................................................................................TGAGTAAACTGTCGTTTCGGGCGCGG...........................................................................2611.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CGCGGGCGCTGGACGCCTCGAAGCCG......................................................2611.001.00----------------------------------------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATACG........1811.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
........................................................CGGAGAGGTATCTGCTGCGCCTGAGATGAGTA...............................................................................................3211.001.00--------------------------------------------------------------------------------------------1.00-------------------------------------------
.................................................................................................................................CTGCCGGTCTTCCGCTGT....................................1811.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CGCTGGACGCCTCGAAGC........................................................1811.001.00-----------------------------------------------------------------------------------------------1.00----------------------------------------
............................................................................................................................................CCGCTGTGAGGATCTGCCCGACCTGCAC...............2811.001.00---------------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................CGGGCGCGGGCGCTGGACGCCTCGAAGC........................................................2811.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................CGCCTGAGATGAGTAAACTGTCGTTTCGG.................................................................................2911.001.00-----------------------------------------------------------------------1.00----------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATtgcg.......19TGCG1.003.00-----------1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................GTTTCGGGCGCGGGCGCT......................................................................1811.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................GTAAACTGTCGTTTCGGGCGCGGGCG........................................................................2611.001.00--------1.00-------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................CTGGACGCCTCGAAGCCGC.....................................................1911.001.00---------------------------------------------------1.00------------------------------------------------------------------------------------
............................................................................................................................................CCGCTGTGAGGATCTGCCCGACCTGCA................2711.001.00--------------------------------------------------------------------------------------------------------------------1.00-------------------
................................................................................................................TGGACGCCTCGAAGCCGCTGCCGGTtt............................................27TT1.002.00--------1.00-------------------------------------------------------------------------------------------------------------------------------
..........................................................................................CTGTCGTTTCGGGCGCG............................................................................1711.001.00----------------1.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................TGAGATGAGTAAACTGTCGTTTCGGtc...............................................................................27TC1.001.00---------------------------------------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................TCCGCTGTGAGGATCTGCCCGACCTGC.................2711.001.00--------------------------------1.00-------------------------------------------------------------------------------------------------------
..............................................................GGTATCTGCTGCGCCTGAGATGAGT................................................................................................2511.001.00-----------------------------------------------------------------------------------------------------------------1.00----------------------
...........................................................................CCTGAGATGAGTAAACTG..........................................................................................1811.001.00--------------------------------------------------------------------------------1.00-------------------------------------------------------
........................................................................GCGCCTGAGATGAGTAAACTGT.........................................................................................2211.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGTAAAatgt.........................................................................................28ATGT1.000.00---1.00------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGTGAGGATCTGCCCGACCTGCACGA.............2611.001.00------------------------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................CTGTCGTTTCGGGCGCGG...........................................................................1811.001.00---------------------------------------------------------------------------1.00------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATgtcg.......19GTCG1.003.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CCCGACCTGCACGAATACGC.......2011.001.00-----------------------------------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................TTCCGCTGTGAGGATCTG...........................1811.001.00------------------------------------------------------------------------------------------------------1.00---------------------------------
................................................................................................................................................TGTGAGGATCTGCCCGACCTGCACGAA............2711.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................AAACTGTCGTTTCGGGCGCGGGC.........................................................................2311.001.00---------------------------------------------------------------------------------------------------------1.00------------------------------
.............................................................................................................................................................CCGACCTGCACGAATAgcgt......20GCGT1.000.00--------------1.00-------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATAagg.......19AGG1.000.00----------------------------------1.00-----------------------------------------------------------------------------------------------------
................................................................TATCTGCTGCGCCTGAGATGAGTAAACTG..........................................................................................2911.001.00-------------------------------------------------------------------------------------1.00--------------------------------------------------
.....................................................................................................................GCCTCGAAGCCGCTGC..................................................1620.500.50---------------------------------------------------------------------------------------------------------------------------------------0.50
GGAGACCGAAACTCCGGTTCTCCATGATCCCGCTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATCTGCTGCGCCTGAGATGAGTAAACTGTCGTTTCGGGCGCGGGCGCTGGACGCCTCGAAGCCGCTGCCGGTCTTCCGCTGTGAGGATCTGCCCGACCTGCACGAATACGCCTCGATA
..................................................(((((((((((((........))))))))))))).((((.....))))...((((((....))).)))..................................................
........................................................................73.................................................................140.........................................
SizePerfect hitTotal NormPerfect NormmjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (blood)
SRR059773(GSM562835)
CD4_Dicer. (spleen)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (liver)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
mjLiverWT2()
Liver Data. (liver)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR073954(GSM629280)
total RNA. (blood)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
mjTestesWT3()
Testes Data. (testes)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR037929(GSM510467)
e7p5_rep3. (embryo)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM179088(GSM179088)
Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
RuiDcrKO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dicer skin)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
GSM475280(GSM475280)
Mili-IP. (mili testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (gland)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR073955(GSM629281)
total RNA. (blood)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM314558(GSM314558)
ESC wild type (454). (ESC)
SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR206942(GSM723283)
other. (brain)
GSM475281(GSM475281)
total RNA. (testes)
SRR206941(GSM723282)
other. (brain)
SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
............................................................GAGGTATCTGCTGCGCCTGAGATGAGTA............................................................................................... 2816.006.00---3.00--1.00-2.00-------------------------------------------------------------------------------------------------------------------------------
........................................................................GCGCCTGAGATGAGTAAACTGTCGTT..................................................................................... 2613.003.00-------------------1.00-----------1.00--------1.00-----------------------------------------------------------------------------------------------
.........................................................GGAGAGGTATCTGCTGCGCCTG........................................................................................................ 2212.002.00------------------------2.00---------------------------------------------------------------------------------------------------------------
..........................................................................GCCTGAGATGAGTAAACTGTCGTTTC................................................................................... 2612.002.00--------------------------------------------------------------------2.00-------------------------------------------------------------------
........................................................CGGAGAGGTATCTGCTGCGCCTGAG...................................................................................................... 2512.002.00---------------------------------------------1.00---1.00--------------------------------------------------------------------------------------
.........................................GCCGTTTCCCCAGAGCGG............................................................................................................................ 1812.002.00----1.00----------------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GGATCTGCCCGACCTGCACGAATACGCCTC.... 3012.002.00----------------------------------------------2.00-----------------------------------------------------------------------------------------
..........................................................................GCCTGAGATGAGTAAACT........................................................................................... 1812.002.00----2.00-----------------------------------------------------------------------------------------------------------------------------------
.......GAAACTCCGGTTCTCCATGAT........................................................................................................................................................... 2112.002.00----2.00-----------------------------------------------------------------------------------------------------------------------------------
.......GAAACTCCGGTTCTCCATGATCCC........................................................................................................................................................ 2412.002.00--------------------------------------------------------1.00----------1.00--------------------------------------------------------------------
...........................................................................................................agtaCTGGACGCCTCGAAGC........................................................ 20agta2.000.00-------------------------------------------------1.00-------------------1.00------------------------------------------------------------------
..........................................................GAGAGGTATCTGCTGCGCCT......................................................................................................... 2011.001.00---------------------------------------------------1.00------------------------------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAG................................................................................................. 2011.001.00------------------------------------------------------------------------1.00---------------------------------------------------------------
.........AACTCCGGTTCTCCATGATCCCGC...................................................................................................................................................... 2411.001.00---------------------------------------------------------------------------------------------------------------------------------1.00------
..................................................CCAGAGCGGAGAGGTAT.................................................................................................................... 1711.001.00-----------------------------------1.00----------------------------------------------------------------------------------------------------
..........................................................................................................................................................TGCCCGACCTGCACGAATACGCCTCGA.. 2711.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.......GAAACTCCGGTTCTCCATGATC.......................................................................................................................................................... 2211.001.00---------------------------------1.00------------------------------------------------------------------------------------------------------
................GTTCTCCATGATCCCGCT..................................................................................................................................................... 1811.001.00-----------------------------------------------------------------------------------------------------------------------1.00----------------
.....................................CGGGGCCGTTTCCCCAGAGCGGA........................................................................................................................... 2311.001.00--------------------------1.00-------------------------------------------------------------------------------------------------------------
............................................................GAGGTATCTGCTGCGCCT......................................................................................................... 1811.001.00------------------------------------------------------------------------------------------------------------------------1.00---------------
........................................................CGGAGAGGTATCTGCTGCGCCTGAGA..................................................................................................... 2611.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................ATCTGCTGCGCCTGAGATGAGT................................................................................................ 2211.001.00-----------------1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................GACCTGCACGAATACGCCTCGATA 2411.001.00--------------------------------------------------------------------------------------------------1.00-------------------------------------
.....................................................................................................................................CGGTCTTCCGCTGTGAGGAT.............................. 2011.001.00-----------------------------------------------------------------------------1.00----------------------------------------------------------
.................................................................ATCTGCTGCGCCTGAGATGAGTAA.............................................................................................. 2411.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................GGAGAGGTATCTGCTGCGCCTGAGAT.................................................................................................... 2611.001.00---------------------------------1.00------------------------------------------------------------------------------------------------------
........aacCTCCGGTTCTCCATGATCCCGC...................................................................................................................................................... 25aac1.000.00------------------------------------------------1.00---------------------------------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGT................................................................................................ 2111.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
..........................................................GAGAGGTATCTGCTGCGCCTGAGAT.................................................................................................... 2511.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
........................................................................GCGCCTGAGATGAGTAAACTGTCGT...................................................................................... 2511.001.00------------------------------------------------------------------------------------------------------------------------------1.00---------
.....................................................................GCTGCGCCTGAGATGAGTAAACTGTC........................................................................................ 2611.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GTCTTCCGCTGTGAGGATCTGCCCGA...................... 2611.001.00-----------------------------------------------------------------1.00----------------------------------------------------------------------
..................................................................TCTGCTGCGCCTGAGATGAGTAAACTG.......................................................................................... 2711.001.00-------------------1.00--------------------------------------------------------------------------------------------------------------------
................GTTCTCCATGATCCCGCTGGCCG................................................................................................................................................ 2311.001.00----------------------------------------------------------------1.00-----------------------------------------------------------------------
.........................................................GGAGAGGTATCTGCTGCGCCTGAGATGA.................................................................................................. 2811.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................GGGCCGTTTCCCCAGAGCGGAGAGGTATC................................................................................................................... 2911.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------
...........................................................................................................................AAGCCGCTGCCGGTCTTCCGCTGTGA.................................. 2611.001.00-----------------------------1.00----------------------------------------------------------------------------------------------------------
...........................................................AGAGGTATCTGCTGCGCCT......................................................................................................... 1911.001.00------------------------------------------------------------------------------------1.00---------------------------------------------------
............TCCGGTTCTCCATGATCCCGCTGGCC................................................................................................................................................. 2611.001.00--------------------------------------------------------1.00-------------------------------------------------------------------------------
...........CTCCGGTTCTCCATGATCCCG....................................................................................................................................................... 2111.001.00------------------------------------1.00---------------------------------------------------------------------------------------------------
...........CTCCGGTTCTCCATGATCCC........................................................................................................................................................ 2011.001.00----------------------------------------------------------------------------------------------------------------1.00-----------------------
................................................................TATCTGCTGCGCCTGAGATG................................................................................................... 2011.001.00-------------1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CTGCCCGACCTGCACGAATACGCC...... 2411.001.00-------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................CCTGCACGAATACGCCTCGAT. 2111.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
..............CGGTTCTCCATGATCCCG....................................................................................................................................................... 1811.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GTCTTCCGCTGTGAGGATCTGCCCGACCTGC................. 3111.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------
.......................................GGGCCGTTTCCCCAGAGCGG............................................................................................................................ 2011.001.00------------------------------------------------------------------------------1.00---------------------------------------------------------
...................................................................CTGCTGCGCCTGAGATGAGTAAA............................................................................................. 2311.001.00----------------------------------------------------------------------------------------------------------------------1.00-----------------
..........................................CCGTTTCCCCAGAGCGGAG.......................................................................................................................... 1911.001.00---------------------1.00------------------------------------------------------------------------------------------------------------------
...................................................................................GAGTAAACTGTCGTTTCGGGCGCGGGCGC....................................................................... 2911.001.00----------------------------------------------------------1.00-----------------------------------------------------------------------------
........................................GGCCGTTTCCCCAGAGCGG............................................................................................................................ 1911.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................................TCCCCAGAGCGGAGAGG....................................................................................................................... 1711.001.00-----------------------------------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................GAGGATCTGCCCGACCTG.................. 1811.001.00-------------------------------------------------------------------------------1.00--------------------------------------------------------
....................................................................................AGTAAACTGTCGTTTCGGGCGC............................................................................. 2211.001.00-------------------------------------------------------------------------------------------------------1.00--------------------------------
.......................................................................................................................................GTCTTCCGCTGTGAGGAT.............................. 1811.001.00--------------------------------------------------------------------------------------1.00-------------------------------------------------
............................................................................................................gggtTGGACGCCTCGAAGCC....................................................... 20gggt1.000.00----------------------------------------------------------1.00-----------------------------------------------------------------------------
......................................................AGCGGAGAGGTATCTGCTGCGCCTG........................................................................................................ 2511.001.00--------------------------------------1.00-------------------------------------------------------------------------------------------------
..........ACTCCGGTTCTCCATGATCCCGCTGGCC................................................................................................................................................. 2811.001.00-----------------------------------------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................TTCCGCTGTGAGGATCTGCCCG....................... 2211.001.00-------------------------------------1.00--------------------------------------------------------------------------------------------------
.........................................GCCGTTTCCCCAGAGCGGA........................................................................................................................... 1911.001.00--------------1.00-------------------------------------------------------------------------------------------------------------------------
..........cCTCCGGTTCTCCATGATCCCGCTG.................................................................................................................................................... 25c1.000.00-----------------------------------------------------------------------------------------------------------1.00----------------------------
......................................................................................................................................GGTCTTCCGCTGTGAGGATCTGCCCGAC..................... 2811.001.00---------------------------------------1.00------------------------------------------------------------------------------------------------
...............................................................................................................CTGGACGCCTCGAAGCCG...................................................... 1811.001.00--------------------------------------------------------------------------------------1.00-------------------------------------------------
.........................................................................................................accGCGCTGGACGCCTCG............................................................ 18acc1.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCGACCTGCACGAATACGCCTCGATA 2611.001.00-------------------------------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGGATCTGCCCGACCTGC................. 1811.001.00----------------------------------------------------------1.00-----------------------------------------------------------------------------
............................................................................................................................................................tCCGACCTGCACGAAT........... 16t1.000.00----------------------------------1.00-----------------------------------------------------------------------------------------------------
.....CCGAAACTCCGGTTCTCCATG............................................................................................................................................................. 2111.001.00----------------------------------------------------------------------------------------------------1.00-----------------------------------