ID: hsa-mir-622
chr13:90883386-90883581 +
Display Libraries
(1)
AGO2.ip 		(1)
B-CELL 		(16)
BREAST 		(7)
CELL-LINE 		(1)
CERVIX 		(2)
LIVER 		(2)
OTHER 		(2)
PLACENTA
Showing top 28 reads
GATCATGGCAGACATTCGGCCCAATACGATGAGCTGGCTGGGAAGAACCGAGAGAAGCTGGACAAGTACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCATCACACAGTCTGCTGAGGTTGGAGCTGCTGAGATGACACTCACGGAGCTGAGACATACAGTCTAGTCCTTGGAGATCGACTTGGACTCCA
.....................................................((...(((.((..(((((((((((((..((((.(((....))).)).))...)))))))))))))..)).))).))..................................................
........................................................57............................................................................135...........................................................
SizePerfect hitTotal NormPerfect NormSRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189784GSM532876(GSM532876)
G547T. (cervix)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR139199(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)
..............................................................................................................ACAGTCTGCTGAGGTTGGAGC.................................................................2127.007.000.50--------1.00----1.00---0.500.500.50-0.500.500.50-0.500.500.50--
..................................................................................................................TCTGCTGAGGTTGGAGCTGC..............................................................2023.503.503.00--0.50---------------------------
.........................................................................................GAGCACCACAGTGGTttg.........................................................................................18TTG1.000.00-----1.00-------------------------
...................................................................................................................CTGCTGAGGTTGGAGCTGCTG............................................................2121.001.00-1.00-----------------------------
.................................CTGGCTGGGAAGAACtcat................................................................................................................................................19TCAT1.000.00--1.00----------------------------
.................................................................................................................GTCTGCTGAGGTTGGctg.................................................................18CTG1.000.00----1.00--------------------------
................................................................................................................................AGCTGCTGAGATGACta...................................................17TA1.000.00-----------1.00-------------------
..............................................................................................................ACAGTCTGCTGAGGTTGGAGt.................................................................21T1.000.00------------1.00------------------
..................................................................................................................TCTGCTGAGGTTGGAGCTGCTGA...........................................................2321.001.00-----------------0.50-------0.50-----
...................................................GAGAAGCTGGACAAGaacg..............................................................................................................................19AACG1.000.00---------------1.00---------------
.................................................................................................................GTCTGCTGAGGTTGGAGCTGCTGAGA.........................................................2621.001.00-1.00-----------------------------
................................................................................................................AGTCTGCTGAGGTTGGAtct................................................................20TCT1.000.00------1.00------------------------
.........................................................................CTCAGCAGATTGAGGgc..........................................................................................................17GC1.000.00----------1.00--------------------
................................................................................................................AGTCTGCTGAGGTTGGAGCTGCTG............................................................2421.001.00-0.50-----------0.50-----------------
..............................................................................................................ACAGTCTGCTGAGGTTGagc..................................................................20AGC1.000.00-------1.00-----------------------
....................................................................................................................TGCTGAGGTTGGAGCTGCTGA...........................................................2121.001.000.50--0.50---------------------------
....................................................................................................................TGCTGAGGTTGGAGCTGC..............................................................1820.500.50---0.50---------------------------
....................................................................................................................TGCTGAGGTTGGAGCTGCTGAG..........................................................2220.500.50-0.50-----------------------------
...............................................................................................................CAGTCTGCTGAGGTTGGAGC.................................................................2020.500.50---------------------0.50---------
.................................................................................................................GTCTGCTGAGGTTGGAG..................................................................1720.500.50-0.50-----------------------------
..................................................................................................................TCTGCTGAGGTTGGAGCTGCTG............................................................2220.500.50-------------0.50-----------------
.................................................................................................................GTCTGCTGAGGTTGGAGCTGCTGA...........................................................2420.500.50-0.50-----------------------------
...............................................................................................................CAGTCTGCTGAGGTTGGAGCTGCT.............................................................2420.500.50----------------0.50--------------
.......................................................................................................................TGAGGTTGGAGCTGCTGA...........................................................1830.330.330.33------------------------------
.......................................................................................................................TGAGGTTGGAGCTGCTGAa..........................................................19A0.330.330.33------------------------------
....................................................................CTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGT............................................................................................3680.250.25-----------------------------0.120.12
..................................................................TACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTG..............................................................................................3680.250.25-----------------------------0.120.12
GATCATGGCAGACATTCGGCCCAATACGATGAGCTGGCTGGGAAGAACCGAGAGAAGCTGGACAAGTACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCATCACACAGTCTGCTGAGGTTGGAGCTGCTGAGATGACACTCACGGAGCTGAGACATACAGTCTAGTCCTTGGAGATCGACTTGGACTCCA
.....................................................((...(((.((..(((((((((((((..((((.(((....))).)).))...)))))))))))))..)).))).))..................................................
........................................................57............................................................................135...........................................................
SizePerfect hitTotal NormPerfect NormSRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189784GSM532876(GSM532876)
G547T. (cervix)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR139199(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)
.............................................................................................................................................gttaTCACGGAGCTGAGACA................................... 20gtta1.000.00--1.00----------------------------
.....................................................................................................................tagaAGGTTGGAGCTGCTG............................................................ 19taga1.000.00--------1.00----------------------