ID: hsa-mir-619
chr12:109230634-109230832 -
Display Libraries
(2)
AGO2.ip
(6)
B-CELL
(1)
BRAIN
(5)
BREAST
(21)
CELL-LINE
(2)
CERVIX
(5)
HEART
(1)
KIDNEY
(5)
LIVER
(3)
LUNG
(1)
OTHER
(1)
PLACENTA
(8)
SKIN
(3)
SPLEEN
(2)
THYMUS
(1)
UTERUS
(1)
XRN.ip
Showing top 189 reads
GTGTTGCCATGTTGGCCAGGCTGGTCTCGAACCCCTGACCTCAAGTGATCCGCCCACCTCAGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACTGCGGTCGACCATGACCTGGACATGTTTGTGCCCAGTACTGTCAGTTTGCAGAGTGTCCCTCAGTGTGAGTGTGTCTGATGTTCTTGTGTGATTCCACCGGG
......................................................(((((((...(((((((((..(((....((((......))))))).))))))))).))))))).....................................................
....................................................................69...................................................................138...........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189783SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR343335SRR189786SRR139180(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)
SRR139217(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189787GSM532874(GSM532874)
G699T. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139205(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139167(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR343336SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR139190(SRX050652)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR139219(SRX050655)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR139164(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR038861(GSM458544)
MM466. (cell line)
SRR139207(SRX050653)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR139179(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038862(GSM458545)
MM472. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038857(GSM458540)
D20. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
...........................................AGTGATCCGCCCACCTCcccc.......................................................................................................................................21CCCC2.000.002.00------------------------------------------------------------------------
.................AGGCTGGTCTCGAACCCCgacg................................................................................................................................................................22GACG2.000.00-2.00-----------------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCCgaaa............................................................................................................................................24GAAA2.000.00------------------------1.00-----------------------1.00------------------------
.........TGTTGGCCAGGCTGGTCTCGAACCggcc..................................................................................................................................................................28GGCC2.000.002.00------------------------------------------------------------------------
...........TTGGCCAGGCTGGTCTCGAACCgacc..................................................................................................................................................................26GACC2.000.001.001.00-----------------------------------------------------------------------
..........................................AAGTGATCCGCCCACCTCAGCCTCagg..................................................................................................................................27AGG2.000.001.001.00-----------------------------------------------------------------------
.............................AACCCCTGACCTCAAGTGATCCGgc.................................................................................................................................................25GC2.000.00-2.00-----------------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCtttg.............................................................................................................................................23TTTG2.000.00-------------------2.00-----------------------------------------------------
...................................TGACCTCAAGTGATCCGCataa..............................................................................................................................................22ATAA2.000.00-------2.00-----------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCtatt.............................................................................................................................................23TATT2.000.00-----------1.00------------------1.00------------------------------------------
........ATGTTGGCCAGGCTGGTCTCGAAtaat....................................................................................................................................................................27TAAT2.000.00--------2.00----------------------------------------------------------------
...................................TGACCTCAAGTGATCCGaag................................................................................................................................................20AAG1.000.00------------1.00------------------------------------------------------------
...TTGCCATGTTGGCCAGGCTctcg.............................................................................................................................................................................23CTCG1.000.00-1.00-----------------------------------------------------------------------
...................................TGACCTCAAGTGATCCGatt................................................................................................................................................20ATT1.000.00---------1.00---------------------------------------------------------------
.....................................................................AAATGCTGGGATTACAGGCATGAGCCACTccc..................................................................................................32CCC1.000.00-1.00-----------------------------------------------------------------------
...........TTGGCCAGGCTGGTCTCGAACgggg...................................................................................................................................................................25GGGG1.000.00-----------------------------------------------------------------1.00-------
...............................................................................................................ACCTGGACATGTTTGTGCCCAGT.................................................................2311.001.00-----------------------------------------------------1.00-------------------
............TGGCCAGGCTGGTCTCGAACCCCTcgtg...............................................................................................................................................................28CGTG1.000.00-1.00-----------------------------------------------------------------------
....TGCCATGTTGGCCAGGCTctcg.............................................................................................................................................................................22CTCG1.000.00-1.00-----------------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCttta..............................................................................................................................................22TTTA1.000.00-----1.00-------------------------------------------------------------------
......................................CCTCAAGTGATCCGCCCgtaa............................................................................................................................................21GTAA1.000.00-----1.00-------------------------------------------------------------------
...................................................GCCCACCTCAGCCTCCCActta..............................................................................................................................22CTTA1.000.00------------------------------------------------------1.00------------------
.................AGGCTGGTCTCGAACCCCTGACCTCgggc.........................................................................................................................................................29GGGC1.000.001.00------------------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCCtaaa............................................................................................................................................24TAAA1.000.00--------------------------------------------------------1.00----------------
.........TGTTGGCCAGGCTGGTCTCGAACCat....................................................................................................................................................................26AT1.000.00-------------------------------------------------------------1.00-----------
...........TTGGCCAGGCTGGTCTaagc........................................................................................................................................................................20AAGC1.000.00-------------------------1.00-----------------------------------------------
........................TCTCGAACCCCTGACCTCcggc.........................................................................................................................................................22CGGC1.000.00-1.00-----------------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCataa.............................................................................................................................................23ATAA1.000.00--------------------------------1.00----------------------------------------
...TTGCCATGTTGGCCAGGCTGGTgggg..........................................................................................................................................................................26GGGG1.000.00-1.00-----------------------------------------------------------------------
....................................................................................AGGCATGAGCCACTGCGGacc..............................................................................................21ACC1.000.001.00------------------------------------------------------------------------
...............................................ATCCGCCCACCTCAGCCTCCCggga...............................................................................................................................25GGGA1.000.00-1.00-----------------------------------------------------------------------
.............................AACCCCTGACCTCAAGTGATCCGCCCtcct............................................................................................................................................30TCCT1.000.00-1.00-----------------------------------------------------------------------
.................AGGCTGGTCTCGAACCCCTGAgccc.............................................................................................................................................................25GCCC1.000.001.00------------------------------------------------------------------------
...........TTGGCCAGGCTGGTCTCGAACCCCTGgtca..............................................................................................................................................................30GTCA1.000.001.00------------------------------------------------------------------------
...........TTGGCCAGGCTGGTCTCGcca.......................................................................................................................................................................21CCA1.000.00----------------------------------------------------1.00--------------------
...................................TGACCTCAAGTGATCCGaaca...............................................................................................................................................21AACA1.000.00---------------------------------------1.00---------------------------------
.........................................................................................................................................GTCAGTTTGCAGAGTGTCC...........................................1911.001.00--1.00----------------------------------------------------------------------
............TGGCCAGGCTGGTCTCGAACtaaa...................................................................................................................................................................24TAAA1.000.00---------------------------1.00---------------------------------------------
...................................TGACCTCAAGTGATCCGCCCAaaa............................................................................................................................................24AAA1.000.00---------------------------------------------------------1.00---------------
................CAGGCTGGTCTCGAAaaaa....................................................................................................................................................................19AAAA1.000.00--------------1.00----------------------------------------------------------
...................................TGACCTCAAGTGATCCGCaat...............................................................................................................................................21AAT1.000.00----------------------------------------------------------1.00--------------
...........................................AGTGATCCGCCCACCTCAGCCTCagg..................................................................................................................................26AGG1.000.00-1.00-----------------------------------------------------------------------
..................................................CGCCCACCTCAGCCTCCCggg................................................................................................................................21GGG1.000.00-1.00-----------------------------------------------------------------------
..............................ACCCCTGACCTCAAGTGATCCGCg.................................................................................................................................................24G1.000.001.00------------------------------------------------------------------------
.........TGTTGGCCAGGCTGGTCTCGAACCCCTaccc...............................................................................................................................................................31ACCC1.000.00-1.00-----------------------------------------------------------------------
........ATGTTGGCCAGGCTGGTtcta..........................................................................................................................................................................21TCTA1.000.00---------------------------------------------------1.00---------------------
........ATGTTGGCCAGGCTGGTCTCGAACCCCaag.................................................................................................................................................................30AAG1.000.001.00------------------------------------------------------------------------
......................................................................................................................CATGTTTGTGCCCAGTgg...............................................................18GG1.000.00-----------1.00-------------------------------------------------------------
........ATGTTGGCCAGGCTGGgcgt...........................................................................................................................................................................20GCGT1.000.00-1.00-----------------------------------------------------------------------
...TTGCCATGTTGGCCAGGCTGGgcga...........................................................................................................................................................................25GCGA1.000.001.00------------------------------------------------------------------------
...............CCAGGCTGGTCTCGAACCCCgaac................................................................................................................................................................24GAAC1.000.00-1.00-----------------------------------------------------------------------
.....................................ACCTCAAGTGATCCGCCCtcga............................................................................................................................................22TCGA1.000.00---------1.00---------------------------------------------------------------
.......................................................................ATGCTGGGATTACAGGCATGAGCCAttt....................................................................................................28TTT1.000.00------------------------------------------------------------1.00------------
.........TGTTGGCCAGGCTGGTCTCGAACCCacc..................................................................................................................................................................28ACC1.000.001.00------------------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCCgaat............................................................................................................................................24GAAT1.000.00-----------------------------1.00-------------------------------------------
..........................................AAGTGATCCGCCCACtggc..........................................................................................................................................19TGGC1.000.00-1.00-----------------------------------------------------------------------
........ATGTTGGCCAGGCTGGTCTCGgtg.......................................................................................................................................................................24GTG1.000.00-1.00-----------------------------------------------------------------------
.........TGTTGGCCAGGCTGGTCTCGcagc......................................................................................................................................................................24CAGC1.000.00-1.00-----------------------------------------------------------------------
...TTGCCATGTTGGCCAGGCTGcagc............................................................................................................................................................................24CAGC1.000.00-1.00-----------------------------------------------------------------------
....TGCCATGTTGGCCAGGCTGGcccg...........................................................................................................................................................................24CCCG1.000.001.00------------------------------------------------------------------------
..................................CTGACCTCAAGTGATCCGCaaaa..............................................................................................................................................23AAAA1.000.00-------1.00-----------------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCCACta............................................................................................................................................24TA1.000.00-----------------1.00-------------------------------------------------------
...........TTGGCCAGGCTGGTCggat.........................................................................................................................................................................19GGAT1.000.00--------------------1.00----------------------------------------------------
.......................................................................ATGCTGGGATTACAGGCATGAaaa........................................................................................................24AAA1.000.00--------------------------------------------------1.00----------------------
..............GCCAGGCTGGTCTCGAACCCCTGAggtg.............................................................................................................................................................28GGTG1.000.00------------------------------------------------------------------1.00------
.............................................TGATCCGCCCACCTCAGCCccag...................................................................................................................................23CCAG1.000.001.00------------------------------------------------------------------------
................................................TCCGCCCACCTCAGCCcagg...................................................................................................................................20CAGG1.000.00-1.00-----------------------------------------------------------------------
.......................................................................ATGCTGGGATTACAGGCATGAGCCAtat....................................................................................................28TAT1.000.00------------------------------------1.00------------------------------------
...................................TGACCTCAAGTGATCCGCCtaat.............................................................................................................................................23TAAT1.000.00------------------1.00------------------------------------------------------
...................................TGACCTCAAGTGATCCGCCCgtta............................................................................................................................................24GTTA1.000.00-----------------------------------1.00-------------------------------------
.....GCCATGTTGGCCAGGCTGaaa.............................................................................................................................................................................21AAA1.000.00-------------------------------1.00-----------------------------------------
....................................................................................................................................................................................CTTGTGTGATTCCACCGGG1911.001.00--------------1.00----------------------------------------------------------
...................................TGACCTCAAGTGATCCGCtttt..............................................................................................................................................22TTTT1.000.00------------------------------------------1.00------------------------------
.....................TGGTCTCGAACCCCTGgacc..............................................................................................................................................................20GACC1.000.00---------------------------------------------------------------1.00---------
.........TGTTGGCCAGGCTGGTCTCGAACCgag...................................................................................................................................................................27GAG1.000.001.00------------------------------------------------------------------------
...............CCAGGCTGGTCTCGAACgctg...................................................................................................................................................................21GCTG1.000.00--------------------------------------------1.00----------------------------
.......................................................................ATGCTGGGATTACAGcgtt.............................................................................................................19CGTT0.500.00--------------------0.50----------------------------------------------------
......................................................................AATGCTGGGATTACAGcgtt.............................................................................................................20CGTT0.500.00-------------------------------------------------------------------0.50-----
........................................................................TGCTGGGATTACAGGCATGAGCCgcga....................................................................................................27GCGA0.330.000.33------------------------------------------------------------------------
...................................................................................CAGGCATGAGCCACTcga..................................................................................................18CGA0.250.00---------------------------------------------------------------------0.25---
................................................................................TTACAGGCATGAGCCACTGaag.................................................................................................22AAG0.250.00-----------------------------------------------------------------------0.25-
.........................................................................GCTGGGATTACAGGCATGAcga........................................................................................................22CGA0.250.00----------------------0.25--------------------------------------------------
............................................................................GGGATTACAGGCATGAGtaga......................................................................................................21TAGA0.200.00----------------------------------------------------------------------0.20--
..........................................................................CTGGGATTACAGGCATGAGtaga......................................................................................................23TAGA0.200.00------------------------------------------------------------------------0.20
..........................................................................CTGGGATTACAGGCATGAGCCgata....................................................................................................25GATA0.200.00----------------------------------------------------------------------0.20--
............................................................................GGGATTACAGGCATGgata........................................................................................................19GATA0.170.00---------------------------------------------------------------------0.17---
GTGTTGCCATGTTGGCCAGGCTGGTCTCGAACCCCTGACCTCAAGTGATCCGCCCACCTCAGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACTGCGGTCGACCATGACCTGGACATGTTTGTGCCCAGTACTGTCAGTTTGCAGAGTGTCCCTCAGTGTGAGTGTGTCTGATGTTCTTGTGTGATTCCACCGGG
......................................................(((((((...(((((((((..(((....((((......))))))).))))))))).))))))).....................................................
....................................................................69...................................................................138...........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189783SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR343335SRR189786SRR139180(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)
SRR139217(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189787GSM532874(GSM532874)
G699T. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139205(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139167(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR343336SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR139190(SRX050652)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR139219(SRX050655)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR139164(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR038861(GSM458544)
MM466. (cell line)
SRR139207(SRX050653)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR139179(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038862(GSM458545)
MM472. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038857(GSM458540)
D20. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
......cgccGTTGGCCAGGCTGGTCT............................................................................................................................................................................ 21cgcc38.000.0032.005.00--------------1.00--------------------------------------------------------
......tgccGTTGGCCAGGCTGGTCT............................................................................................................................................................................ 21tgcc30.000.0025.004.00--------------1.00--------------------------------------------------------
......cgccGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 24cgcc26.000.0010.0016.00-----------------------------------------------------------------------
......cgccGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 25cgcc15.000.009.006.00-----------------------------------------------------------------------
......tgccGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 24tgcc10.000.003.007.00-----------------------------------------------------------------------
.......gccGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 23gcc10.000.006.004.00-----------------------------------------------------------------------
.......gccGTTGGCCAGGCTGGTCT............................................................................................................................................................................ 20gcc10.000.0010.00------------------------------------------------------------------------
......tgccGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 25tgcc9.000.006.003.00-----------------------------------------------------------------------
.......gccGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 24gcc8.000.007.001.00-----------------------------------------------------------------------
..............ggccGGCTGGTCTCGAACCCCT................................................................................................................................................................... 22ggcc6.000.003.003.00-----------------------------------------------------------------------
......cgccGTTGGCCAGGCTGGTCTC........................................................................................................................................................................... 22cgcc4.000.003.001.00-----------------------------------------------------------------------
.......................ggtTCGAACCCCTGACCTCA............................................................................................................................................................ 20ggt3.000.00---3.00---------------------------------------------------------------------
.......gtcGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 24gtc3.000.001.002.00-----------------------------------------------------------------------
......cgtcGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 25cgtc3.000.002.001.00-----------------------------------------------------------------------
......................gggaTCGAACCCCTGACCT.............................................................................................................................................................. 19ggga3.000.00---------------2.00-----------------1.00---------------------------------------
.......................................................tccaCAGCCTCCCAAAATGCT........................................................................................................................... 21tcca3.000.00----3.00--------------------------------------------------------------------
..............ggccGGCTGGTCTCGAACCCCTGACCTCA............................................................................................................................................................ 29ggcc3.000.003.00------------------------------------------------------------------------
......cgcaGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 24cgca2.000.00-2.00-----------------------------------------------------------------------
......catcGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 24catc2.000.001.001.00-----------------------------------------------------------------------
.................................................aaaaCCACCTCAGCCTCCCAAA................................................................................................................................ 22aaaa2.000.00----------2.00--------------------------------------------------------------
...............................................cgtCGCCCACCTCAGCCTC..................................................................................................................................... 19cgt2.000.00------2.00------------------------------------------------------------------
..............ggccGGCTGGTCTCGAACCCCTGACCT.............................................................................................................................................................. 27ggcc2.000.002.00------------------------------------------------------------------------
......cgccGTTGGCCAGGCTGGT.............................................................................................................................................................................. 19cgcc2.000.002.00------------------------------------------------------------------------
..............................................gtcCCGCCCACCTCAGCCTCCCAA................................................................................................................................. 24gtc2.000.00-2.00-----------------------------------------------------------------------
......cgtcGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 24cgtc2.000.00-2.00-----------------------------------------------------------------------
......catcGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 25catc2.000.00-2.00-----------------------------------------------------------------------
.....................aaaTCTCGAACCCCTGAC................................................................................................................................................................ 18aaa2.000.00--2.00----------------------------------------------------------------------
...............................................tatCGCCCACCTCAGCCTCCCAA................................................................................................................................. 23tat2.000.00--2.00----------------------------------------------------------------------
.............................................tccaCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 24tcca2.000.002.00------------------------------------------------------------------------
.......................................................................................................................................................gaTCCCTCAGTGTGAGT............................... 17ga1.000.00----------------------------------------------1.00--------------------------
...............gccGGCTGGTCTCGAACCCCTGACCTCAA........................................................................................................................................................... 29gcc1.000.00-1.00-----------------------------------------------------------------------
.......................................cgcgAGTGATCCGCCCACCTCAGCCTC..................................................................................................................................... 27cgcg1.000.00-1.00-----------------------------------------------------------------------
........................................................................................................................gcgaTGTGCCCAGTACTGT............................................................ 19gcga1.000.00-----------------------------------------------------------1.00-------------
.............accgAGGCTGGTCTCGAACCCC.................................................................................................................................................................... 22accg1.000.00---------------------1.00---------------------------------------------------
..............ggttGGCTGGTCTCGAACCCCTGACCTCA............................................................................................................................................................ 29ggtt1.000.00-1.00-----------------------------------------------------------------------
..................................cctgCCTCAAGTGATCCGCCCACCT............................................................................................................................................ 25cctg1.000.00-1.00-----------------------------------------------------------------------
.cccTGCCATGTTGGCCAGGCTGGTC............................................................................................................................................................................. 25ccc1.000.00------------------1.00------------------------------------------------------
..............................................gggCCGCCCACCTCAGCCTCCCAAA................................................................................................................................ 25ggg1.000.001.00------------------------------------------------------------------------
............................................gcgtTCCGCCCACCTCAGCCTCCCAA................................................................................................................................. 26gcgt1.000.00-1.00-----------------------------------------------------------------------
........gtcgTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 22gtcg1.000.00-1.00-----------------------------------------------------------------------
............................................gggtTCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 25gggt1.000.001.00------------------------------------------------------------------------
..............cccgGGCTGGTCTCGAACCCCTGACCTCAA........................................................................................................................................................... 30cccg1.000.001.00------------------------------------------------------------------------
........gctcTGGCCAGGCTGGTCT............................................................................................................................................................................ 19gctc1.000.00-----1.00-------------------------------------------------------------------
.............................ttctCCTGACCTCAAGTGATCCGCC................................................................................................................................................. 25ttct1.000.00----------------------1.00--------------------------------------------------
..............................................agTCCGCCCACCTCAGCCTCCCAAAA............................................................................................................................... 26ag1.000.001.00------------------------------------------------------------------------
..................................................................................aaatGCATGAGCCACTGCGGT................................................................................................ 21aaat1.000.00--------------------------1.00----------------------------------------------
.............................................aaaaCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 24aaaa1.000.00---------------------------------------------1.00---------------------------
...............gccGGCTGGTCTCGAACCCCTGACCT.............................................................................................................................................................. 26gcc1.000.001.00------------------------------------------------------------------------
......cgcgGTTGGCCAGGCTGGT.............................................................................................................................................................................. 19cgcg1.000.001.00------------------------------------------------------------------------
.....................................................gaggCTCAGCCTCCCAAAATGCTGGGAT...................................................................................................................... 28gagg1.000.00-1.00-----------------------------------------------------------------------
..............................................tggtCGCCCACCTCAGCCTCCCAA................................................................................................................................. 24tggt1.000.00-1.00-----------------------------------------------------------------------
.............................................aataCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 24aata1.000.00-------------------------------------------------------1.00-----------------
....................................................acttCCTCAGCCTCCCAAAATG............................................................................................................................. 22actt1.000.00-------------------------------------------1.00-----------------------------
......taccGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 25tacc1.000.00-1.00-----------------------------------------------------------------------
......gccgGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 24gccg1.000.00-1.00-----------------------------------------------------------------------
..............................................gtcCCGCCCACCTCAGCCTCCCAAA................................................................................................................................ 25gtc1.000.00-1.00-----------------------------------------------------------------------
..............................................ggtgCGCCCACCTCAGCCTCCCAA................................................................................................................................. 24ggtg1.000.00-1.00-----------------------------------------------------------------------
.............................................aatTCCGCCCACCTCAGCCTCCCAA................................................................................................................................. 25aat1.000.00--------------------------------------------------------------1.00----------
............gacCCAGGCTGGTCTCGAACCCCTGACCT.............................................................................................................................................................. 29gac1.000.001.00------------------------------------------------------------------------
..............................ctctCTGACCTCAAGTGAT...................................................................................................................................................... 19ctct1.000.00-------------------------------------------------1.00-----------------------
.............................................gggcCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 24gggc1.000.00-1.00-----------------------------------------------------------------------
......cgccGTTGGCCAGGCTGGTCTCGAAC....................................................................................................................................................................... 26cgcc1.000.001.00------------------------------------------------------------------------
.....ccgcTGTTGGCCAGGCTGGTCT............................................................................................................................................................................ 22ccgc1.000.00------1.00------------------------------------------------------------------
.......................tatTCGAACCCCTGACCT.............................................................................................................................................................. 18tat1.000.00-----------------------------------------------1.00-------------------------
................................................agCGCCCACCTCAGCCTCCC................................................................................................................................... 20ag1.000.00----------------------------1.00--------------------------------------------
..............................................gggCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 23ggg1.000.00-1.00-----------------------------------------------------------------------
......cgcgGTTGGCCAGGCTGGTCT............................................................................................................................................................................ 21cgcg1.000.00-1.00-----------------------------------------------------------------------
..............................................agTCCGCCCACCTCAGCCTCCCAAAAT.............................................................................................................................. 27ag1.000.001.00------------------------------------------------------------------------
...............................................tcgtGCCCACCTCAGCCTCC.................................................................................................................................... 20tcgt1.000.001.00------------------------------------------------------------------------
..............gtccGGCTGGTCTCGAACCCCTGACCTCAAGT......................................................................................................................................................... 32gtcc1.000.00-1.00-----------------------------------------------------------------------
....................................................................ccgATGCTGGGATTACAGGCATGAGCCAC...................................................................................................... 29ccg1.000.001.00------------------------------------------------------------------------
.............................................................................aacgTACAGGCATGAGCCACTGCG.................................................................................................. 24aacg1.000.00------------1.00------------------------------------------------------------
............................................gcatTCCGCCCACCTCAGCCTCCCAAA................................................................................................................................ 27gcat1.000.00-1.00-----------------------------------------------------------------------
......................................................acaCTCAGCCTCCCAAAATGCT........................................................................................................................... 22aca1.000.00-----------------1.00-------------------------------------------------------
............................................gaggTCCGCCCACCTCAGCCTCCCAA................................................................................................................................. 26gagg1.000.001.00------------------------------------------------------------------------
...............................................tgCCGCCCACCTCAGCCTCCCAA................................................................................................................................. 23tg1.000.00-------------1.00-----------------------------------------------------------
...............agccGCTGGTCTCGAACCCCTGACCTCAAGT......................................................................................................................................................... 31agcc1.000.001.00------------------------------------------------------------------------
..............cgccGGCTGGTCTCGAACCCCTGA................................................................................................................................................................. 24cgcc1.000.001.00------------------------------------------------------------------------
......ggccGTTGGCCAGGCTGGTCT............................................................................................................................................................................ 21ggcc1.000.001.00------------------------------------------------------------------------
.............................................cagcCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 24cagc1.000.00-1.00-----------------------------------------------------------------------
...............................ttgCTGACCTCAAGTGATCCGCCCACCT............................................................................................................................................ 28ttg1.000.001.00------------------------------------------------------------------------
...................................cttCCTCAAGTGATCCGCCCA............................................................................................................................................... 21ctt1.000.00--------------------------------------1.00----------------------------------
......cagcGTTGGCCAGGCTGGTCTCGAA........................................................................................................................................................................ 25cagc1.000.001.00------------------------------------------------------------------------
......................gggaTCGAACCCCTGACCTCA............................................................................................................................................................ 21ggga1.000.00-------------------------------------1.00-----------------------------------
..............ggccGGCTGGTCTCGAACCCCTGA................................................................................................................................................................. 24ggcc1.000.00-1.00-----------------------------------------------------------------------
..............................................accCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 23acc1.000.00-1.00-----------------------------------------------------------------------
.............................cgagCCTGACCTCAAGTGAT...................................................................................................................................................... 20cgag1.000.00-1.00-----------------------------------------------------------------------
....gcgCATGTTGGCCAGGCTGGTCTCGA......................................................................................................................................................................... 26gcg1.000.001.00------------------------------------------------------------------------
.......................ggaTCGAACCCCTGACCTCA............................................................................................................................................................ 20gga1.000.00---1.00---------------------------------------------------------------------
...................................accCCTCAAGTGATCCGCCCACCT............................................................................................................................................ 24acc1.000.00-------------1.00-----------------------------------------------------------
........tccaTGGCCAGGCTGGTCTC........................................................................................................................................................................... 20tcca1.000.00----------------------------------------------------------------1.00--------
..............................................aaaaCGCCCACCTCAGCCTCCC................................................................................................................................... 22aaaa1.000.00----------------------------------1.00--------------------------------------
............aattCAGGCTGGTCTCGAAC....................................................................................................................................................................... 20aatt1.000.00--------1.00----------------------------------------------------------------
.........cgccGGCCAGGCTGGTCTCGAACCC..................................................................................................................................................................... 25cgcc1.000.00-----------------------1.00-------------------------------------------------
.............................................aatTCCGCCCACCTCAGCCTCCCA.................................................................................................................................. 24aat1.000.00----------------------------------------1.00--------------------------------
......caccGTTGGCCAGGCTGGTCTCGAACCCCT................................................................................................................................................................... 30cacc1.000.001.00------------------------------------------------------------------------
..............................................gggCCGCCCACCTCAGCCTCCCAA................................................................................................................................. 24ggg1.000.001.00------------------------------------------------------------------------
......agccGTTGGCCAGGCTGGTCT............................................................................................................................................................................ 21agcc1.000.00-1.00-----------------------------------------------------------------------
....atctATGTTGGCCAGGCTGGT.............................................................................................................................................................................. 21atct1.000.00-----------------------------------------1.00-------------------------------
................................................................taaCAAAATGCTGGGATTAC................................................................................................................... 20taa0.500.00--------------------------------------------------------------------0.50----
.....................................................................cgcTGCTGGGATTACAGGCATGAG.......................................................................................................... 24cgc0.330.000.33------------------------------------------------------------------------
.................................................gtgaCCACCTCAGCCTCCC................................................................................................................................... 19gtga0.250.00---------------------0.25---------------------------------------------------
.....................................................................gatgGCTGGGATTACAGGCATGAGC......................................................................................................... 25gatg0.250.00---------0.25---------------------------------------------------------------
.....................................................................ctaaGCTGGGATTACAGGCAT............................................................................................................. 21ctaa0.200.00-------------------------------------------------------------------0.20-----