ID: hsa-mir-614
chr12:13068713-13068902 +
Display Libraries
(1)
AGO2.ip 		(5)
B-CELL 		(8)
BREAST 		(12)
CELL-LINE 		(8)
CERVIX 		(1)
HEART 		(3)
LIVER 		(2)
LUNG 		(1)
OTHER 		(1)
PLACENTA 		(6)
SKIN 		(1)
SPLEEN 		(2)
TESTES 		(1)
THYMUS 		(1)
XRN.ip
Showing top 81 reads
GTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCCCGTTGTTTCCCTTCTAAGAAACGCAGTGGTCTCTGAAGCCTGCAGGGGCAGGCCAGCCCTGCACTGAACGCCTGTTCTTGCCAGGTGGCAGAAGGTTGCTGCTCATTTGAGCAGTACCTGTCACCCCTCCTCCCACTGCTGCGGCTGTTAAC
.............................................................(((((((((..((((((((.......)))...)))))..))))).))))..................................................
................................................................65.........................................................124................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR139184(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR189784SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139205(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		GSM532876(GSM532876)
G547T. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR040016(GSM532901)
G645N. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR139209(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		TAX577742(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR139180(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139188(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		GSM532872(GSM532872)
G652T. (cervix)		SRR189785SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.....................................................................TCTGAAGCCTGCAGGGGC.......................................................................................................1817.007.00---7.00---------------------------------------------------
.....................................................AAGAAACGCAGTGGTCTCTGAAGC.................................................................................................................2414.004.00-4.00-----------------------------------------------------
......................................................AGAAACGCAGTGGTCTCT......................................................................................................................1814.004.00----4.00--------------------------------------------------
........................................................AAACGCAGTGGTCTCTGAAGCCT...............................................................................................................2313.003.00-3.00-----------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCCtccc.........................................................................................................................................................26TCCC2.000.00--2.00----------------------------------------------------
...............................................................GTGGTCTCTGAAGCCTGCAGG..........................................................................................................2112.002.00-2.00-----------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCCGGCggcc......................................................................................................................................................29GGCC2.000.002.00------------------------------------------------------
.......................................................GAAACGCAGTGGTCTCTGAAGCC................................................................................................................2312.002.00-2.00-----------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCgacc..........................................................................................................................................................25GACC2.000.001.00-1.00----------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCCGGCacac......................................................................................................................................................29ACAC2.000.002.00------------------------------------------------------
..............................................................AGTGGTCTCTGAAGCCTGCAGGGG........................................................................................................2411.001.00------1.00------------------------------------------------
.................ATGAGCCACCGCGCCCGGCCCgata....................................................................................................................................................25GATA1.000.00----------------------------------1.00--------------------
.........................................................................................................................GGTGGCAGAAGGTTGCTGaggt...............................................22AGGT1.000.00--------------------------------1.00----------------------
............................................................................................................................................................TGTCACCCCTCCTCCCACTGCTG...........2311.001.00---------------------------------1.00---------------------
.........................................................................................................................................................ACCTGTCACCCCTCCTCCCACT...............2211.001.00---------1.00---------------------------------------------
...CTGGGATTACAGGCATGAGCCACCGCGCCggca..........................................................................................................................................................33GGCA1.000.00--1.00----------------------------------------------------
.........................................................................................................................GGTGGCAGAAGGTTGtt....................................................17TT1.000.00------------------------------1.00------------------------
.........................................................AACGCAGTGGTCTCTGAAt..................................................................................................................19T1.000.00------------------------------------------1.00------------
.........................................................AACGCAGTGGTCTCTGAAGCCTGCAGGGGCAGact..................................................................................................35ACT1.000.00----------------------------------------1.00--------------
.........TTACAGGCATGAGCCACCGCGCCCtccc.........................................................................................................................................................28TCCC1.000.001.00------------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCCGctt.........................................................................................................................................................26CTT1.000.001.00------------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCCGtcgc........................................................................................................................................................27TCGC1.000.00--1.00----------------------------------------------------
...........ACAGGCATGAGCCACCGgcgt..............................................................................................................................................................21GCGT1.000.00-------------------------------------------1.00-----------
..........TACAGGCATGAGCCACCGCGCCCGGagg........................................................................................................................................................28AGG1.000.001.00------------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCCGGCCCttgc....................................................................................................................................................31TTGC1.000.001.00------------------------------------------------------
..........TACAGGCATGAGCCACCGCGagc.............................................................................................................................................................23AGC1.000.00--1.00----------------------------------------------------
...........ACAGGCATGAGCCACCGCGCaccg...........................................................................................................................................................24ACCG1.000.001.00------------------------------------------------------
.........TTACAGGCATGAGCCACCGCGCCgcct..........................................................................................................................................................27GCCT1.000.001.00------------------------------------------------------
..........TACAGGCATGAGCCACCGtcaa..............................................................................................................................................................22TCAA1.000.00---------------------------1.00---------------------------
............................................................................................................................................................TGTCACCCCTCCTCCCACTGCTGCGGCTGg....30G1.000.00--1.00----------------------------------------------------
.....................................................................................................CTGAACGCCTGTTCTTGCC......................................................................1911.001.00----------------------1.00--------------------------------
...............................................................................................................................................................CACCCCTCCTCCCACcgc.............18CGC1.000.00------------1.00------------------------------------------
........................................................................................................................................................TACCTGTCACCCCTCCTCCCACT...............2311.001.00------------------------1.00------------------------------
................CATGAGCCACCGCGCCCcaat.........................................................................................................................................................21CAAT1.000.00-----------1.00-------------------------------------------
..................................................................................................GCACTGAACGCCTGTTC...........................................................................1711.001.00------------------1.00------------------------------------
...........ACAGGCATGAGCCACCGCGCCCGGCaaac......................................................................................................................................................29AAAC1.000.001.00------------------------------------------------------
..................................................................GTCTCTGAAGCCTGCAGGGGCAG.....................................................................................................2311.001.00-------------------------------------1.00-----------------
...................GAGCCACCGCGCCCGGCCCCGggcc..................................................................................................................................................25GGCC1.000.001.00------------------------------------------------------
..........................................................ACGCAGTGGTCTCTGAAGC.................................................................................................................1911.001.00-1.00-----------------------------------------------------
...............................................................GTGGTCTCTGAAGCCTGCAGGGGCAGGCCAGC...............................................................................................3211.001.00------1.00------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCCGGCgcag......................................................................................................................................................29GCAG1.000.001.00------------------------------------------------------
........................................................AAACGCAGTGGTCTCTGAAG..................................................................................................................2011.001.00-1.00-----------------------------------------------------
...........ACAGGCATGAGCCACCGCGCCgcct..........................................................................................................................................................25GCCT1.000.001.00------------------------------------------------------
.............................................................................................................................................................GTCACCCCTCCTCCCcgcg..............19CGCG1.000.00-------------------1.00-----------------------------------
...........ACAGGCATGAGCCACCGCGCCCGccg.........................................................................................................................................................26CCG1.000.00--1.00----------------------------------------------------
..................TGAGCCACCGCGCCCGGCCCCGcgtc..................................................................................................................................................26CGTC1.000.00--------------------------------------------1.00----------
..............................................................................................CCCTGCACTGAACGCCT...............................................................................1720.500.50------------------------------------------------0.50------
.TGCTGGGATTACAGGCATGAGCCgcga..................................................................................................................................................................27GCGA0.330.000.33------------------------------------------------------
...........................................................CGCAGTGGTCTCTGAAGC.................................................................................................................1830.330.33------0.33------------------------------------------------
..................TGAGCCACCGCGCCCGGCCCCGTT....................................................................................................................................................2470.290.29----0.29--------------------------------------------------
..GCTGGGATTACAGGCATGAcga......................................................................................................................................................................22CGA0.250.00--------------------------------------------------0.25----
.....GGGATTACAGGCATGAGtaga....................................................................................................................................................................21TAGA0.200.00-------------------------------------------------0.20-----
...CTGGGATTACAGGCATGAGtaga....................................................................................................................................................................23TAGA0.200.00-----------------------------------------------------0.20-
...CTGGGATTACAGGCATGAGCCgata..................................................................................................................................................................25GATA0.200.00-------------------------------------------------0.20-----
.....GGGATTACAGGCATGgata......................................................................................................................................................................19GATA0.170.00------------------------------------------------------0.17
GTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCCCGTTGTTTCCCTTCTAAGAAACGCAGTGGTCTCTGAAGCCTGCAGGGGCAGGCCAGCCCTGCACTGAACGCCTGTTCTTGCCAGGTGGCAGAAGGTTGCTGCTCATTTGAGCAGTACCTGTCACCCCTCCTCCCACTGCTGCGGCTGTTAAC
.............................................................(((((((((..((((((((.......)))...)))))..))))).))))..................................................
................................................................65.........................................................124................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR139184(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR189784SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139205(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		GSM532876(GSM532876)
G547T. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR040016(GSM532901)
G645N. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR139209(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		TAX577742(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR139180(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139188(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		GSM532872(GSM532872)
G652T. (cervix)		SRR189785SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
..................agcGCCACCGCGCCCGGC.......................................................................................................................................................... 18agc7.000.00-----2.00----1.00----------1.00---1.00--1.00--1.00-----------------------
................acatAGCCACCGCGCCCGGC.......................................................................................................................................................... 20acat4.000.00--------2.00------1.00-------------1.00-------------------------
..................ttcGCCACCGCGCCCGGC.......................................................................................................................................................... 18ttc3.000.00--------------------------------------1.001.00-----1.00---------
.................cactGCCACCGCGCCCGGC.......................................................................................................................................................... 19cact1.000.00-----------------------1.00-------------------------------
..........ctctGGCATGAGCCACCGCGCCCGGCC......................................................................................................................................................... 27ctct1.000.001.00------------------------------------------------------
.............AGGCATGAGCCACCGCGCCCGGCCCCGTT.................................................................................................................................................... 2911.001.001.00------------------------------------------------------
.................tcgcGCCACCGCGCCCGGC.......................................................................................................................................................... 19tcgc1.000.00--------------------------1.00----------------------------
...............accgGAGCCACCGCGCCCGGCC......................................................................................................................................................... 22accg1.000.00-----------------------------------------1.00-------------
...............gaacGAGCCACCGCGCCCGGC.......................................................................................................................................................... 21gaac1.000.00-----------------------------------------------1.00-------
...............tcccGAGCCACCGCGCCCGGC.......................................................................................................................................................... 21tccc1.000.00----------------1.00--------------------------------------
..........................................taagCCCTTCTAAGAAACGCA............................................................................................................................... 21taag1.000.00-----------------------------------1.00-------------------
....................ttCCACCGCGCCCGGCCC........................................................................................................................................................ 18tt1.000.00-------------1.00-----------------------------------------
..............taaATGAGCCACCGCGCCCGGCC......................................................................................................................................................... 23taa1.000.00-------1.00-----------------------------------------------
.................aagcGCCACCGCGCCCGGC.......................................................................................................................................................... 19aagc1.000.00------------------------------------1.00------------------
............aaaGCATGAGCCACCGCGCCCGGCCCC....................................................................................................................................................... 27aaa1.000.00-----------------1.00-------------------------------------
..............attgTGAGCCACCGCGCCCGGC.......................................................................................................................................................... 22attg1.000.00----------------------------------------------1.00--------
...............ggacGAGCCACCGCGCCCGGC.......................................................................................................................................................... 21ggac1.000.00--------------------1.00----------------------------------
...................................................................................................................................................caaAGTACCTGTCACCCC......................... 18caa1.000.00-------1.00-----------------------------------------------
...................ggGCCACCGCGCCCGGCCCCGTT.................................................................................................................................................... 23gg1.000.00--1.00----------------------------------------------------
....................................................................................................................................................................acCCTCCCACTGCTGCG......... 17ac1.000.00--------------1.00----------------------------------------
..................aacGCCACCGCGCCCGGC.......................................................................................................................................................... 18aac1.000.00-----1.00-------------------------------------------------
ggccCTGGGATTACAGGCATGAGCCACCG.................................................................................................................................................................. 29ggcc1.000.00--1.00----------------------------------------------------
..........gcctGGCATGAGCCACCGCGCCCGG........................................................................................................................................................... 25gcct1.000.00--1.00----------------------------------------------------
cgcTGCTGGGATTACAGGCATGAG........................................................................................................................................................................ 24cgc0.330.000.33------------------------------------------------------
gatgGCTGGGATTACAGGCATGAGC....................................................................................................................................................................... 25gatg0.250.00---------------------------------------------------0.25---
ctaaGCTGGGATTACAGGCAT........................................................................................................................................................................... 21ctaa0.200.00---------0.20---------------------------------------------
..............................................................................................................................................................TCACCCCTCCTCCCACT............... 1750.200.20----------------------------------------------------0.20--