| (1) BRAIN | (1) BREAST | (5) CELL-LINE | (2) CERVIX | (6) OTHER | (2) SKIN | (1) XRN.ip |
| TATGAATCTTGAGAATTGATAGATCTGTCAGATTATAGAGGAGGAGGGAGTCTTATCAATGAGGTAGACCATGGGTTCTCATTGTAATAGTGTAGAATGTTGGTTAACTGTGGACTCCCTGGCTCTGTCTCAAATCTACTGATTCATAATTTTTGGGTGTGGGGCTTGGGAATGTGTTTTAAACAAGCTCTCCAA ...........................................................((((..((((((.((((((.((...((((.((.....))....))))..)).)))).)).))).)))..))))............................................................... ..................................................51............................................................................................145................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR189784 | SRR189783 | SRR343336 | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR040008(GSM532893) G727N. (cervix) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR040038(GSM532923) G531N. (cervix) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | TAX577743(Rovira) total RNA. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................AATGTTGGTTAACTGTGGACTCtg............................................................................ | 24 | TG | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................ATAATTTTTGGGTGTGGGGCTTGGGAAcg..................... | 29 | CG | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................AGGAGGAGGGAGTCTactc.......................................................................................................................................... | 19 | ACTC | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGTAATAGTGTAGAATGTTGG............................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................TGTGGGGCTTGGGAAcca.................... | 18 | CCA | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................GAGTCTTATCAATGAGGTAGA............................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................AGACCATGGGTTCTCATTGT.............................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................GGGTGTGGGGCTTGGGccgc..................... | 20 | CCGC | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................ATAGAGGAGGAGGGAGTCTTATC.......................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................TCTGTCTCAAATCTAg........................................................ | 16 | G | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................ACTGTGGACTCCCTGGCTCTGTCcc................................................................ | 25 | CC | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TATGAATCTTGAGAATTGATAGATCTGTCAGATTATAGAGGAGGAGGGAGTCTTATCAATGAGGTAGACCATGGGTTCTCATTGTAATAGTGTAGAATGTTGGTTAACTGTGGACTCCCTGGCTCTGTCTCAAATCTACTGATTCATAATTTTTGGGTGTGGGGCTTGGGAATGTGTTTTAAACAAGCTCTCCAA ...........................................................((((..((((((.((((((.((...((((.((.....))....))))..)).)))).)).))).)))..))))............................................................... ..................................................51............................................................................................145................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR189784 | SRR189783 | SRR343336 | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR040008(GSM532893) G727N. (cervix) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR040038(GSM532923) G531N. (cervix) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | TAX577743(Rovira) total RNA. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................agccGTGTAGAATGTTGGT........................................................................................... | 19 | agcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................................................cctcGTGGGGCTTGGGAATG..................... | 20 | cctc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..ctcATCTTGAGAATTGATA.............................................................................................................................................................................. | 19 | ctc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................cttCTGGCTCTGTCTCAAA............................................................. | 19 | ctt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................ctgtTTGGGAATGTGTTTT............... | 19 | ctgt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................gATAGTGTAGAATGTTG............................................................................................. | 17 | g | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................caaGCTCTGTCTCAAATC........................................................... | 18 | caa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |