ID: hsa-mir-573
chr4:24521765-24521963 -
Display Libraries
(21)
B-CELL
(15)
BREAST
(58)
CELL-LINE
(5)
FIBROBLAST
(2)
HEART
(6)
HELA
(3)
LIVER
(1)
OTHER
(2)
RRP40.ip
(41)
SKIN
(1)
THYMUS
(4)
UTERUS
(1)
XRN.ip
Showing top 72 reads
TAATAACCTTAGAGAAACATGTAGGATTTTCTACAAAAAGTGTCGGCTGCTTTAGCGGTTTCTCCCTGAAGTGATGTGTAACTGATCAGGATCTACTCATGTCGTCTTTGGTAAAGTTATGTCGCTTGTCAGGGTGAGGAGAGTTTTTGAGATGCAAATTTTCCCGTTTTTGTTTTATTACCATGGAGAAATGTAATAG
.....................................................(((..((((.((((((((((((..((((((.((((((((..((....)).))))).)))..))))))))))))..)))))).))))...)))......................................................
..................................................51................................................................................................149................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM359192(GSM359192)
HepG2_3pM_6. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR038855(GSM458538)
D10. (cell line)
GSM359193(GSM359193)
HepG2_3pM_7. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
GSM359187(GSM359187)
HepG2_2pM_1. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037931(GSM510469)
293GFP. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038854(GSM458537)
MM653. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359191(GSM359191)
HepG2_3pM_5. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359188(GSM359188)
HepG2_2pM_2. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)
SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359190(GSM359190)
HepG2_3pM_4. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
GSM359205(GSM359205)
HepG2_nucl_up. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................CTGAAGTGATGTGTAACTGATCAGG.............................................................................................................251683.00683.0089.0041.0021.0025.0060.0042.0010.0035.008.002.0014.0019.00-14.003.0013.0011.0011.0016.007.009.008.007.008.005.008.004.00-8.004.001.007.002.006.006.007.009.006.003.00-6.005.00-2.004.004.001.004.005.001.006.00-2.004.002.005.00-5.003.003.002.00---4.001.00-2.00-4.004.002.00-1.001.00-3.001.00-3.001.001.00-3.001.00-1.002.002.00-2.002.002.00----2.00---1.00-2.00-2.002.00--1.001.00-1.001.001.001.00---1.00-1.00-1.00-----1.00----1.00-1.00--1.00-1.00--1.001.001.00-----1.00----
..................................................................TGAAGTGATGTGTAACTGATC................................................................................................................211462.00462.00125.0096.0034.0020.0010.0030.0014.0016.0023.0015.006.00-1.005.008.00-2.001.00-3.001.002.001.00-2.00-2.00--3.00-1.003.00--1.00-2.001.004.00--3.002.003.00-1.002.00-1.00-----1.00-----2.00-1.00-2.00-1.00-----1.00---1.00----1.00-------------------------1.00-------------------1.00-1.00-1.00--------------1.00--1.001.00--1.00--
.................................................................CTGAAGTGATGTGTAACTGATC................................................................................................................221271.00271.0079.0050.0020.0054.003.00-----2.001.005.003.002.001.004.003.00-1.00--3.002.00-1.00-3.00--9.001.002.002.00----2.00--1.00-2.00--3.001.00----------1.00------1.00-1.00-----1.00-------------------1.00-1.00----2.00-------------------------1.00------1.00--------1.00--------------
.................................................................CTGAAGTGATGTGTAACTGATCAG..............................................................................................................241221.00221.0035.0036.0051.001.0010.002.0011.00-3.00-7.005.001.00-4.005.00---3.002.00--1.002.00-1.00-2.003.00--2.00-----1.003.001.00-4.00--2.001.00-1.001.001.001.002.001.001.00-----1.00--2.00--1.00-1.00--1.001.001.001.00------2.00----------------------------------------1.00--------------------1.00-----1.00-------
.................................................................CTGAAGTGATGTGTAACTGATCAGGA............................................................................................................26178.0078.0014.004.008.001.005.003.00-3.00--1.00----2.00-2.00---1.002.001.001.001.001.00-1.001.00----2.002.00----1.001.00---1.001.00------1.001.00-2.00--1.00--------------------2.00---1.002.001.00------------2.00-1.001.00-1.00--1.00-----------------------------1.00-------------------
.................................................................CTGAAGTGATGTGTAACTGATCA...............................................................................................................23160.0060.004.001.004.002.002.00-6.00-2.0018.00--2.00------1.002.00-1.00---1.003.00---------1.00-----1.00-------1.001.00-------1.00-------2.00---2.00----------------1.00----------------------------1.00--------------------------------------
..................................................................TGAAGTGATGTGTAACTGATCAGG.............................................................................................................24132.0032.009.001.006.002.00------1.00----------1.00------------1.00----1.00--------------------------2.00--------1.00--------1.00--------1.00-1.00--------1.00---------------1.00------1.00----------1.00------------------
.................................................................CTGAAGTGATGTGTAACTGAT.................................................................................................................21130.0030.005.00-2.004.00--------9.001.00-1.00-----------2.00----1.001.00--------1.00-----------------------------1.00--------------------------------------------1.00-------1.00-------------------------------
..................................................................TGAAGTGATGTGTAACTGATCAG..............................................................................................................23119.0019.006.002.005.00-------1.00-----1.00--1.00---1.00-----------------------------------------------1.00------------------------1.00------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGATCA...............................................................................................................22118.0018.003.00---1.00-11.00-----------------1.00-------------------------------------------1.00---------------------------1.00------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGAT.................................................................................................................20110.0010.003.001.001.00----------------------1.00-2.00---1.00----------------------------------------------------------------------1.00------------------------------------------------------
.....................................................................AGTGATGTGTAACTGATCAG..............................................................................................................2019.009.00------8.00---------------------------------------------------------------------------------------1.00--------------------------------------------------------------
.....................................................................AGTGATGTGTAACTGATCA...............................................................................................................1917.007.00--------2.00-----5.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCAGa.............................................................................................................25A7.00221.00-5.00-1.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GAAGTGATGTGTAACTGATC................................................................................................................2016.006.002.004.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................AAGTGATGTGTAACTGATC................................................................................................................1915.005.00-5.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GAAGTGATGTGTAACTGATCA...............................................................................................................2115.005.00-5.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTG...................................................................................................................1815.005.00------------5.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................TAGGATTTTCTACAAgcaa...............................................................................................................................................................19GCAA5.000.00--------------------------------------------------------------5.00----------------------------------------------------------------------------------------------
................................................................CCTGAAGTGATGTGTAACTGATCAGG.............................................................................................................2615.005.001.00----------1.00--1.00----------------------------------------------1.00--------------------------------------------------------------------------------------1.00--------
.................................................................CTGAAGTGATGTGTAAC.....................................................................................................................1714.004.00-1.00-------------------------------------------------3.00---------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACT....................................................................................................................1814.004.00---------------------------------------------------1.00------------------------------2.00------1.00-------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCAGt.............................................................................................................25T4.00221.00----1.00------1.00-------------------------------------1.00------------------------------------------------1.00----------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGA..................................................................................................................2014.004.00----1.00-----------------------------------------------1.00-1.00--------------------------------------------------------------------------------------------------1.00---
..........................................................................................ATCTACTCATGTCGTCTTTGGTA......................................................................................2313.003.00-3.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTG...................................................................................................................1913.003.002.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................AGTGATGTGTAACTGATC................................................................................................................1813.003.00-------------------------------------------------2.00------------------------------------------------1.00----------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGATt................................................................................................................21T3.0010.00--------------------------2.00------------------------------------1.00---------------------------------------------------------------------------------------------
.....................................................................AGTGATGTGTAACTGATCAGG.............................................................................................................2113.003.00--------------------------------------------------------2.00-1.00--------------------------------------------------------------------------------------------------
......................................................................GTGATGTGTAACTGATC................................................................................................................1713.003.00--3.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCcgg.............................................................................................................25CGG2.00271.00---------------------------------1.00--------------------1.00------------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGATCAGa.............................................................................................................24A2.0019.00-------------1.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCAGGAa...........................................................................................................27A2.0078.00----1.00------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGATCggg.............................................................................................................24GGG2.00462.001.00-----------------------------------------------------------------1.00------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCAtg.............................................................................................................25TG2.0060.00------------------------------------------------1.00----------1.00-------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGA..................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
.................................................................CTGAAGTGATGTGTAACTtat.................................................................................................................21TAT1.004.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
...................................AAAAGTGTCGGCTGCTTTAGCGGT............................................................................................................................................2411.001.00--------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
..................................................................TGAAGTGATGTGTAACTGATCAGc.............................................................................................................24C1.0019.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACT....................................................................................................................1721.001.00------------0.50--------------------------------------0.50---------------------------------------------------------------------------------------------------------
......CCTTAGAGAAACATGTAGGAT............................................................................................................................................................................2111.001.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGgtc................................................................................................................21GTC1.005.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATaagg.............................................................................................................25AAGG1.0030.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
........TTAGAGAAACATGTAGGATTTTCca......................................................................................................................................................................25CA1.000.00------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGctc................................................................................................................21CTC1.005.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGctc................................................................................................................22CTC1.003.00---------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...................................................................................GATCAGGATCTACTCATGTCGTCTTT..........................................................................................2611.001.00--------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
........................................................................GATGTGTAACTGATCAGG.............................................................................................................1811.001.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATgagg.............................................................................................................25GAGG1.0030.00------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
......................................................................GTGATGTGTAACTGATCcg..............................................................................................................19CG1.003.00----------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCtgg.............................................................................................................25TGG1.00271.00--------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
................................................................CCTGAAGTGATGTGTAACTGATCAtt.............................................................................................................26TT1.000.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
................................................................CCTGAAGTGATGTGTAACTGATgagg.............................................................................................................26GAGG1.000.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
................................................................CCTGAAGTGATGTGTAACTGATCAGGA............................................................................................................2711.001.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGttc................................................................................................................21TTC1.005.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCAt..............................................................................................................24T1.0060.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATaa...............................................................................................................23AA1.0030.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................TGAAGTGATGTGTAACTGAcc................................................................................................................21CC1.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GAAGTGATGTGTAACTGgtc................................................................................................................20GTC1.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCAGc.............................................................................................................25C1.00221.00---------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
.................................................................CTGAAGTGATGTGTAACTGATCAcg.............................................................................................................25CG1.0060.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
................................................................CCTGAAGTGATGTGTAACTGATC................................................................................................................2311.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................AGCGGTTTCTCCCTGAAGTGAcgtg.........................................................................................................................25CGTG1.000.00------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
..............................................................................................................................................................TTTTCCCGTTTTTGTTcatt.....................20CATT1.000.00------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
...................................................................GAAGTGATGTGTAACTGAT.................................................................................................................1920.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------0.50-
..................................................................TGAAGTGATGTGTAACTtgtc................................................................................................................21TGTC0.501.00--0.50----------------------------------------------------------------------------------------------------------------------------------------------------------
.................CATGTAGGATTTTCTA......................................................................................................................................................................1640.250.25-------------------------0.25-----------------------------------------------------------------------------------------------------------------------------------
...........GAGAAACATGTAGGA.............................................................................................................................................................................1560.170.17-----------------------------------------------------------------------------------------------------------0.17-------------------------------------------------
.................................................................CTGAAGTGATGTGTA.......................................................................................................................1570.140.14--0.14----------------------------------------------------------------------------------------------------------------------------------------------------------
TAATAACCTTAGAGAAACATGTAGGATTTTCTACAAAAAGTGTCGGCTGCTTTAGCGGTTTCTCCCTGAAGTGATGTGTAACTGATCAGGATCTACTCATGTCGTCTTTGGTAAAGTTATGTCGCTTGTCAGGGTGAGGAGAGTTTTTGAGATGCAAATTTTCCCGTTTTTGTTTTATTACCATGGAGAAATGTAATAG
.....................................................(((..((((.((((((((((((..((((((.((((((((..((....)).))))).)))..))))))))))))..)))))).))))...)))......................................................
..................................................51................................................................................................149................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM359192(GSM359192)
HepG2_3pM_6. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR038855(GSM458538)
D10. (cell line)
GSM359193(GSM359193)
HepG2_3pM_7. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
GSM359187(GSM359187)
HepG2_2pM_1. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037931(GSM510469)
293GFP. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038854(GSM458537)
MM653. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359191(GSM359191)
HepG2_3pM_5. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359188(GSM359188)
HepG2_2pM_2. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)
SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359190(GSM359190)
HepG2_3pM_4. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
GSM359205(GSM359205)
HepG2_nucl_up. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................ataAGGATTTTCTACAAA.................................................................................................................................................................. 18ata2.000.00---------------------------------------------------------------------------2.00---------------------------------------------------------------------------------
...........................................................................................................................ggacGTCAGGGTGAGGAGA......................................................... 19ggac1.000.00----------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
..............................aTACAAAAAGTGTCGG......................................................................................................................................................... 16a1.000.00--------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
.....................................................................................TCAGGATCTACTCAT................................................................................................... 1580.120.12------------------------------------------------------------------------------------------------------------------------------------------------------------0.12