ID: hsa-mir-555
chr1:155316091-155316286 -
Display Libraries
(1)
AGO2.ip 		(3)
BRAIN 		(6)
BREAST 		(6)
CELL-LINE 		(3)
HEART 		(1)
HELA 		(4)
LIVER 		(1)
RRP40.ip 		(18)
SKIN 		(1)
UTERUS 		(1)
XRN.ip
Showing top 49 reads
TCCCCAAACTGTATGTTTTTCTACAGGTATGGCAGCACTGTGATTGTATGGGAGTGAACTCAGATGTGGAGCACTACCTTTGTGAGCAGTGTGACCCAAGGCCTGTGGACAGGGTAAGCTGAACCTCTGATAAAACTCTGATCTATAAGTAGGAGAGGTAGCACATGGTATCTCACCTGTCCTGCTCCTGCTTTGC
..................................................((((((..(((.......))))))).))..(((..((((.((........))))))..)))...................................................
..................................................51...........................................................112..................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................CAAGGCCTGTGGACAGG...................................................................................1723.503.50---1.500.50----0.50------------------------0.500.50------
..............................................TATGGGAGTGAACTCAGATGTGGAGC............................................................................................................................2613.003.003.00-----------------------------------------
........................................................AACTCAGATGTGGAGCACTACCT.....................................................................................................................2313.003.003.00-----------------------------------------
..............................GGCAGCACTGTGATTGTATGG.................................................................................................................................................2113.003.00--2.00--1.00------------------------------------
..........................................................................................GTGACCCAAGGCCTGTGGACAGGG..................................................................................2412.002.00----2.00-------------------------------------
.......................................................................................AGTGTGACCCAAGGCCTGTGGACAGGG..................................................................................2712.002.002.00-----------------------------------------
...............................................................................................CCAAGGCCTGTGGACAGG...................................................................................1821.501.50--------1.50---------------------------------
................................................................................................CAAGGCCTGTGGACAGGGTAAG..............................................................................2211.001.00------1.00-----------------------------------
...................................................................................................................................................AGTAGGAGAGGTAGCACA...............................1811.001.00--------------1.00---------------------------
..................................................GGAGTGAACTCAGATGTGGAGCACTACCTTTGTG................................................................................................................3411.001.00-----------------1.00------------------------
.............................................................AGATGTGGAGCACTACC......................................................................................................................1711.001.00---1.00--------------------------------------
.........................................................ACTCAGATGTGGAGCACTACCT.....................................................................................................................2211.001.00---------------------1.00--------------------
................................................................................................CAAGGCCTGTGGACAGGG..................................................................................1811.001.00-----1.00------------------------------------
..................................................GGAGTGAACTCAGATGTGG...............................................................................................................................1911.001.00---------1.00--------------------------------
..CCCAAACTGTATGTTTTTCTACA...........................................................................................................................................................................2311.001.00------------1.00-----------------------------
..................................................GGAGTGAACTCAGATGTGGAGCA...........................................................................................................................2311.001.00----------------------1.00-------------------
...............................................................................TTGTGAGCAGTGTGACCCAAGGCCTGTGGACAGG...................................................................................3411.001.00--------------------------1.00---------------
.....................................CTGTGATTGTATGGGAGTGAACTCAGATGTG................................................................................................................................3111.001.00-------------------------1.00----------------
...........................TATGGCAGCACTGTGATTGTATGGGAG..............................................................................................................................................2711.001.00-1.00----------------------------------------
.....................................................................................GCAGTGTGACCCAAGGCCTGTGGACAGGG..................................................................................2911.001.00--1.00---------------------------------------
....................................................................................................................................................GTAGGAGAGGTAGCACATGG............................2011.001.00------------------------------1.00-----------
..................................................GGAGTGAACTCAGATGTGGAGCACTAt.......................................................................................................................27T1.000.00---------------------------1.00--------------
.............................TGGCAGCACTGTGATTGTATG..................................................................................................................................................2111.001.00----------------------------1.00-------------
..................................................................................TGAGCAGTGTGACCCAAGGC..............................................................................................2011.001.00-----------------------1.00------------------
....................................................................................AGCAGTGTGACCCAAGGCCTGTGGACAGGGagc...............................................................................33AGC1.000.00------------------1.00-----------------------
.............................................................AGATGTGGAGCACTACCTTT...................................................................................................................2011.001.00------1.00-----------------------------------
................................................TGGGAGTGAACTCAGATGTGGAGCA...........................................................................................................................2511.001.001.00-----------------------------------------
.................................AGCACTGTGATTGTATGGt................................................................................................................................................19T1.000.00-------1.00----------------------------------
............................................................CAGATGTGGAGCACTACCTT....................................................................................................................2011.001.00-------------------------------1.00----------
..........................................................CTCAGATGTGGAGCACTA........................................................................................................................1811.001.00------------------------1.00-----------------
.......................................GTGATTGTATGGGAGTGAACTCAGATGT.................................................................................................................................2811.001.00-------------------1.00----------------------
....................................ACTGTGATTGTATGGGAGTGAACTCtg.....................................................................................................................................27TG1.000.00-1.00----------------------------------------
..................................................................................TGAGCAGTGTGACCCAAGGCCTGTGGAC......................................................................................2811.001.00-1.00----------------------------------------
...............................GCAGCACTGTGATTGTATGGG................................................................................................................................................2111.001.00----------------1.00-------------------------
.................................AGCACTGTGATTGTATGGG................................................................................................................................................1911.001.00-------1.00----------------------------------
..................................................................................................................................................AAGTAGGAGAGGTAGCACtctg............................22TCTG1.000.00----------1.00-------------------------------
...........................................TTGTATGGGAGTGAACTCAGATGTGGAG.............................................................................................................................2811.001.00--------------------------------1.00---------
..................................GCACTGTGATTGTATGGGAGTGAACTC.......................................................................................................................................2711.001.00-----------------------------1.00------------
............................................................CAGATGTGGAGCACTACC......................................................................................................................1811.001.00---------------1.00--------------------------
................................................................................................CAAGGCCTGTGGACAG....................................................................................1670.430.43------------------------------------0.43-----
...................................................GAGTGAACTCAGATGTG................................................................................................................................1730.330.33-------------------------------------0.33----
.................................................................................................AAGGCCTGTGGACAGG...................................................................................1640.250.25-0.25----------------------------------------
..................................................................................................................................................AAGTAGGAGAGGTAGC..................................1660.170.17----------------------------------------0.17-
.................TTTCTACAGGTATGG....................................................................................................................................................................1570.140.14-----------------------------------------0.14
TCCCCAAACTGTATGTTTTTCTACAGGTATGGCAGCACTGTGATTGTATGGGAGTGAACTCAGATGTGGAGCACTACCTTTGTGAGCAGTGTGACCCAAGGCCTGTGGACAGGGTAAGCTGAACCTCTGATAAAACTCTGATCTATAAGTAGGAGAGGTAGCACATGGTATCTCACCTGTCCTGCTCCTGCTTTGC
..................................................((((((..(((.......))))))).))..(((..((((.((........))))))..)))...................................................
..................................................51...........................................................112..................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................................gatCATGGTATCTCACCT.................. 18gat1.000.00-------------1.00----------------------------
..................................................................................gcttCAGTGTGACCCAAGGCCTG........................................................................................... 23gctt1.000.00---------------------------------1.00--------
...............................................................................................................................................................tgatCATGGTATCTCACCT.................. 19tgat1.000.00--------------------1.00---------------------
...................................................................................................................................................................CATGGTATCTCACCTG................. 1640.500.50----------0.25---------------------------0.25---
................................................................................................................................................................gatCATGGTATCTCACCTG................. 19gat0.250.50---------------------------------------0.25--