ID: hsa-mir-554
chr1:151518222-151518417 +
Display Libraries
(1)
BRAIN
(1)
BREAST
(7)
CELL-LINE
(2)
CERVIX
(2)
HEART
(3)
LIVER
(1)
PLACENTA
(2)
SKIN
(1)
THYMUS
Showing top 23 reads
GGAGAGTCCCAGGGGTGAGAGGAAGGCCTACAGATAGACCCAGGGTGAAGACCTGAGTAACCTTTGCTAGTCCTGACTCAGCCAGTACTGGTCTTAGACTGGTGATGGGTCAGGGTTCATATTTTGGCATCTCTCTCTGGGCATCTTTCCTCTTCTTTTTTAGACCTCATGACCAAGGCAGCTGGTGTCCCCTGCT
...................................................((.(((.......((((((((((((((((((((((.(((....)))))))))..))))))))))........)))))).....))).))........................................................
..................................................51.............................................................................................146................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR139200(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR139218(SRX050647)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................TTTCCTCTTCTTTTTTtacg...............................20TACG2.000.00-2.00------------------
.......................................................................................................................................TCTGGGCATCTTTCCTCTTCTTTTctag.................................28CTAG2.000.002.00-------------------
...............................................................................................AGACTGGTGATGGGTCAGGGT................................................................................2111.001.00-----1.00--------------
.........................................................................................................................................................................TGACCAAGGCAGCTGctcg........19CTCG1.000.001.00-------------------
..................................................................................................................................................TTCCTCTTCTTTTTTtcat...............................19TCAT1.000.00----------------1.00---
............................................GTGAAGACCTGAGTAAtc......................................................................................................................................18TC1.000.00---1.00----------------
.................................................................................................................................................................AGACCTCATGACCAAGGCAGCTG............2311.001.00--1.00-----------------
................................................................................................................................ATCTCTCTCTGGGCATCTTTCCTCTTCTTT......................................3011.001.00---------1.00----------
.................................................................GCTAGTCCTGACTCAGCCcaat.............................................................................................................22CAAT1.000.00------1.00-------------
..........AGGGGTGAGAGGAAGGCCTgtg....................................................................................................................................................................22GTG1.000.001.00-------------------
................................................................................................................................................CTTTCCTCTTCTTTTTTtccg...............................21TCCG1.000.00-1.00------------------
................................GATAGACCCAGGGTGtg...................................................................................................................................................17TG1.000.00--------------1.00-----
................................................................................................................................................CTTTCCTCTTCTTTTTTcag................................20CAG1.000.00-------------1.00------
.................................................................................................................................................TTTCCTCTTCTTTTTTttag...............................20TTAG1.000.00-----------------1.00--
................................................................TGCTAGTCCTGACTCAG...................................................................................................................1720.500.50-------------------0.50
GGAGAGTCCCAGGGGTGAGAGGAAGGCCTACAGATAGACCCAGGGTGAAGACCTGAGTAACCTTTGCTAGTCCTGACTCAGCCAGTACTGGTCTTAGACTGGTGATGGGTCAGGGTTCATATTTTGGCATCTCTCTCTGGGCATCTTTCCTCTTCTTTTTTAGACCTCATGACCAAGGCAGCTGGTGTCCCCTGCT
...................................................((.(((.......((((((((((((((((((((((.(((....)))))))))..))))))))))........)))))).....))).))........................................................
..................................................51.............................................................................................146................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR139200(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR139218(SRX050647)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................tGCATCTTTCCTCTTCTTT...................................... 19t1.000.00------------------1.00-
............................................................................................................................................aCATCTTTCCTCTTCTTT...................................... 18a1.000.00----------1.00---------
........................................................................................................................................ctttGCATCTTTCCTCTTCT........................................ 20cttt1.000.00-------1.00------------
........................................................................................................................................aattGCATCTTTCCTCTTC......................................... 19aatt1.000.00------------1.00-------
..................................................................cagGTCCTGACTCAGCCA................................................................................................................ 18cag1.000.00---------------1.00----
.................................................................................aggGTACTGGTCTTAGAC................................................................................................. 18agg1.000.00--------1.00-----------
........................................................................................................................................ctttGCATCTTTCCTCTTCTTT...................................... 22cttt1.000.00----1.00---------------
...................................................................................tggcCTGGTCTTAGACTGGT............................................................................................. 20tggc1.000.00-----------1.00--------
...........................................................................................................................................tatcTCTTTCCTCTTCTTTT..................................... 20tatc1.000.00--1.00-----------------