ID: hsa-mir-548i-4
chrX:83480710-83480886 -
Display Libraries
(1)
AGO2.ip 		(3)
B-CELL 		(3)
BRAIN 		(6)
BREAST 		(11)
CELL-LINE 		(4)
HEART 		(4)
KIDNEY 		(2)
LIVER 		(3)
LUNG 		(5)
OTHER 		(3)
OVARY 		(1)
PLACENTA 		(5)
SKIN 		(1)
THYMUS
Showing top 64 reads
GGCTGGAGCTTCTGTGAAATCCCAATTTTTATTTAAAAGAATTATGTGTTAGGTTGGTGCAAAAGTAATTGCGGATTTTGCCATACTTTTAACGGCAAAAACCACAAATATTATTGCACCAACCTATAAGAGCAGGGCAGTGCAGGCCGGTGTGCTCTGCATGGGGCTGCTTGCCTT
..................................................((((((((((((.((((.(((.((.(((((((...........))))))).)).))).)))).))))))))))))....................................................
..................................................51..........................................................................127................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782SRR189787SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR029125(GSM416754)
U2OS. (cell line)		SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR029129(GSM416758)
SW480. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		TAX577738(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
............................................................AAAAGTAATTGCGGATTTTGa................................................................................................21A3.000.00-----------0.50--0.25---0.250.25-0.25-0.25-0.25----0.25-----0.250.25--0.25----------
............................................................AAAAGTAATTGCGGATTTTt.................................................................................................20T1.250.00-0.25------0.25-----------------------0.25-0.25----0.25-----------
........................................................................................................................AACCTATAAGAGCAGtag.......................................18TAG1.000.00-1.00-------------------------------------------------
..................ATCCCAATTTTTATTTAttc...........................................................................................................................................20TTC1.000.00------1.00--------------------------------------------
............................................................AAAAGTAATTGCGGATTTTtcc...............................................................................................22TCC1.000.00------------0.25--0.25------0.25----------0.25-----------------
........................................................................................................CAAATATTATTGCACatt.......................................................18ATT1.000.00-----1.00---------------------------------------------
........................................................................................................CAAATATTATTGCACCtctt.....................................................20TCTT1.000.00---1.00-----------------------------------------------
......................CAATTTTTATTTAAAActc........................................................................................................................................19CTC1.000.00-------1.00-------------------------------------------
.........................................TTATGTGTTAGGTTGtaa......................................................................................................................18TAA1.000.00----1.00----------------------------------------------
............................................................AAAAGTAATTGCGGATTTcgtc...............................................................................................22CGTC0.750.000.25-0.50------------------------------------------------
............................................................AAAAGTAATTGCGGATTctgt................................................................................................21CTGT0.750.000.75--------------------------------------------------
............................................................AAAAGTAATTGCGGATTTTc.................................................................................................20C0.750.00-0.25------------0.25-----------0.25------------------------
............................................................AAAAGTAATTGCGGATTTcgcc...............................................................................................22CGCC0.750.000.75--------------------------------------------------
........................................................GTGCAAAAGTAATTGCGGAat....................................................................................................21AT0.500.00------------------------0.25----0.25---------------------
............................................................AAAAGTAATTGCGGATTTTtc................................................................................................21TC0.500.00--------0.25--------------------------------0.25---------
............................................................AAAAGTAATTGCGGATTTTtgtc..............................................................................................23TGTC0.500.00-------------0.50-------------------------------------
..............................................TGTTAGGTTGGTGCAAAAGTgaa............................................................................................................23GAA0.330.00-----------------0.33---------------------------------
......................................................TGGTGCAAAAGTAATTGCGtggc....................................................................................................23TGGC0.300.00----------------0.10-------------------------0.10------0.10-
............................................................AAAAGTAATTGCGGAcgcc..................................................................................................19CGCC0.250.000.25--------------------------------------------------
............................................................AAAAGTAATTGCGGATTTTGtt...............................................................................................22TT0.250.00--------------------0.25------------------------------
............................................................AAAAGTAATTGCGGATTTcgca...............................................................................................22CGCA0.250.00--0.25------------------------------------------------
............................................................AAAAGTAATTGCGGATTTTGtct..............................................................................................23TCT0.250.000.25--------------------------------------------------
............................................................AAAAGTAATTGCGGATTgtgc................................................................................................21GTGC0.250.00------------0.25--------------------------------------
............................................................AAAAGTAATTGCGGATctgg.................................................................................................20CTGG0.250.00-0.25-------------------------------------------------
.............................................................AAAGTAATTGCGGATTTgacc...............................................................................................21GACC0.250.00---------0.25-----------------------------------------
............................................................AAAAGTAATTGCGGATat...................................................................................................18AT0.250.00-------------------------------0.25-------------------
............................................................AAAAGTAATTGCGGATTTcgct...............................................................................................22CGCT0.250.00--0.25------------------------------------------------
...........................................................CAAAAGTAATTGCGGATTTTcc................................................................................................22CC0.250.00--0.25------------------------------------------------
............................................................AAAAGTAATTGCGGATTTTact...............................................................................................22ACT0.250.00---------0.25-----------------------------------------
............................................................AAAAGTAATTGCGGATTTTGac...............................................................................................22AC0.250.00--------0.25------------------------------------------
............................................................AAAAGTAATTGCGGATTTTGCCt..............................................................................................23T0.250.00----------0.25----------------------------------------
............................................................AAAAGTAATTGCGGATTTggc................................................................................................21GGC0.250.000.25--------------------------------------------------
............................................................AAAAGTAATTGCGGATTTTtgc...............................................................................................22TGC0.250.00-----------------------------------0.25---------------
............................................................AAAAGTAATTGCGGATTTTGaa...............................................................................................22AA0.250.00--------------------------------------0.25------------
............................................................AAAAGTAATTGCGGATTTgtc................................................................................................21GTC0.250.000.25--------------------------------------------------
...........................................................CAAAAGTAATTGCGGATTTTGgt...............................................................................................23GT0.250.00----------------------------0.25----------------------
............................................................AAAAGTAATTGCGGATTTcgt................................................................................................21CGT0.250.000.25--------------------------------------------------
............................................................AAAAGTAATTGCGGATTTTtct...............................................................................................22TCT0.250.00---------------0.25-----------------------------------
...........................................................CAAAAGTAATTGCGGATTTcgt................................................................................................22CGT0.250.000.25--------------------------------------------------
............................................................AAAAGTAATTGCGGATTTTGCtt..............................................................................................23TT0.250.00---------0.25-----------------------------------------
............................................................AAAAGTAATTGCGGATTTTGga...............................................................................................22GA0.250.00---------------------------0.25-----------------------
............................................................AAAAGTAATTGCGGATgttg.................................................................................................20GTTG0.250.00-0.25-------------------------------------------------
....................................................GTTGGTGCAAAAGTAATTGCGtc......................................................................................................23TC0.140.00-------------------------------------------0.14-------
.....................................................TTGGTGCAAAAGTAATTGCGtggc....................................................................................................24TGGC0.110.00----------------0.11----------------------------------
......................................................TGGTGCAAAAGTAATTGCGcaat....................................................................................................23CAAT0.100.00------------------------------------------------0.10--
....................................................GTTGGTGCAAAAGTAATTGCtcgc.....................................................................................................24TCGC0.100.00----------------0.10----------------------------------
......................................................TGGTGCAAAAGTAATTGCGacc.....................................................................................................22ACC0.100.00----------------0.10----------------------------------
......................................................TGGTGCAAAAGTAATTGCGaccg....................................................................................................23ACCG0.100.00------------------------------------------0.10--------
......................................................TGGTGCAAAAGTAATTGCGaggg....................................................................................................23AGGG0.100.00--------------------------------------------------0.10
GGCTGGAGCTTCTGTGAAATCCCAATTTTTATTTAAAAGAATTATGTGTTAGGTTGGTGCAAAAGTAATTGCGGATTTTGCCATACTTTTAACGGCAAAAACCACAAATATTATTGCACCAACCTATAAGAGCAGGGCAGTGCAGGCCGGTGTGCTCTGCATGGGGCTGCTTGCCTT
..................................................((((((((((((.((((.(((.((.(((((((...........))))))).)).))).)))).))))))))))))....................................................
..................................................51..........................................................................127................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782SRR189787SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR029125(GSM416754)
U2OS. (cell line)		SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR029129(GSM416758)
SW480. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		TAX577738(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
..................................................................cacTGCGGATTTTGCCATA............................................................................................ 19cac1.000.001.00--------------------------------------------------
.............................................................cAAGTAATTGCGGATTTTG................................................................................................. 19c0.500.00-0.50-------------------------------------------------
..................................................................................agctTTTTAACGGCAAAAA............................................................................ 19agct0.500.00-0.50-------------------------------------------------
...........................................................gcAAAGTAATTGCGGATTTT.................................................................................................. 20gc0.250.00-0.25-------------------------------------------------
...........................................................cgAAAGTAATTGCGGATTTTG................................................................................................. 21cg0.250.00---0.25-----------------------------------------------
...........................................................cggAAGTAATTGCGGATTTT.................................................................................................. 20cgg0.250.00---0.25-----------------------------------------------
..........................................................tcagAAGTAATTGCGGATTT................................................................................................... 20tcag0.250.00--0.25------------------------------------------------
.............................................................caaaTAATTGCGGATTTTG................................................................................................. 19caaa0.250.00-0.25-------------------------------------------------
...........................................................tAAAAGTAATTGCGGATTTT.................................................................................................. 20t0.250.00-0.25-------------------------------------------------
........................................................ggtCAAAAGTAATTGCGGATTTT.................................................................................................. 23ggt0.250.00-0.25-------------------------------------------------
..........................................................tCAAAAGTAATTGCGGATTTTG................................................................................................. 22t0.250.00--0.25------------------------------------------------
.............................................................tAAGTAATTGCGGATTTTGCCA.............................................................................................. 22t0.250.00----------0.25----------------------------------------
..........................................................gcagAAGTAATTGCGGATTTTG................................................................................................. 22gcag0.250.000.25--------------------------------------------------
...................................................ttgTGGTGCAAAAGTAATTGCGG....................................................................................................... 23ttg0.200.00--------------------------------------------0.100.10-----
...................................................aaaTGGTGCAAAAGTAATTGCGG....................................................................................................... 23aaa0.100.00----------------------------------------------0.10----
...................................................tggTGGTGCAAAAGTAATTGCGG....................................................................................................... 23tgg0.100.00-----------------------------------------------0.10---