ID: hsa-mir-548i-2
chr4:9557739-9557987 -
Display Libraries
(2)
AGO2.ip 		(3)
B-CELL 		(3)
BRAIN 		(7)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(5)
HEART 		(4)
KIDNEY 		(2)
LIVER 		(4)
LUNG 		(5)
OTHER 		(3)
OVARY 		(1)
PLACENTA 		(7)
SKIN 		(2)
THYMUS 		(1)
UTERUS
Showing top 71 reads
TCCTTTCCTGTGTTCCCAAACTTCGTTGATCTTCATCAATCCCTCTGATGTAGATGGCTCCGAAGTTTGCATCCTATTAGTTTGGTGCAAAAGTAATTGCGGATTTTGCCATTAAAAGTAATGGCAAAAATAGCAATTATTTTTGTACCAGCCTAGTATCTTTTCTCCTTCTAACAAAGTTCGTCCCTGATCCATCTCATCACCTATAACTACCTCCTCCATGCAGTTGATTCCCAGATCTGTATTATT
...................................................((((((((((((((....))))))))).....((((......))))..........................................)))))........................................................
...................................................................................................100.................................................................................................199................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR037937(GSM510475)
293cand2. (cell line)		SRR139184(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189785SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR029125(GSM416754)
U2OS. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR029129(GSM416758)
SW480. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR139166(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		TAX577738(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
........................................................................................AAAAGTAATTGCGGATTTTGa............................................................................................................................................21A3.000.00------------0.50--0.25-------0.250.25-0.25-0.25-0.25-----0.25-----0.250.25--0.25---------
........................................................................................AAAAGTAATTGCGGATTTTt.............................................................................................................................................20T1.250.00-0.25------0.25-----------------------------0.25-0.25----0.25----------
...................ACTTCGTTGATCTTCATCctg.................................................................................................................................................................................................................21CTG1.000.00----1.00---------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTtcc...........................................................................................................................................22TCC1.000.00-------------0.25--0.25----------0.25-----------0.25----------------
........................................................................................AAAAGTAATTGCGGATTTcgtc...........................................................................................................................................22CGTC0.750.000.25--0.50----------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTctgt............................................................................................................................................21CTGT0.750.000.75-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTc.............................................................................................................................................20C0.750.00-0.25-------------0.25----------------0.25-----------------------
........................................................................................AAAAGTAATTGCGGATTTcgcc...........................................................................................................................................22CGCC0.750.000.75-------------------------------------------------------
....................................................................................GTGCAAAAGTAATTGCGGAat................................................................................................................................................21AT0.500.00-----------------------------0.25-----0.25--------------------
........................................................................................AAAAGTAATTGCGGATTTTtc............................................................................................................................................21TC0.500.00--------0.25--------------------------------------0.25--------
........................................................................................AAAAGTAATTGCGGATTTTtgtc..........................................................................................................................................23TGTC0.500.00--------------0.50-----------------------------------------
............................................................................................................................CAAAAATAGCAATTActaa..........................................................................................................19CTAA0.330.00-0.33------------------------------------------------------
....................................................................................................................................................................................................................................GATTCCCAGATCTGTgcct..19GCCT0.330.00----------0.33---------------------------------------------
.........................................................................................................................................................................................................ACCTATAACTACCTCatag.............................19ATAG0.330.00---------0.33----------------------------------------------
...............................................................................................................................................................................................................AACTACCTCCTCCATtca........................18TCA0.330.00-------0.33------------------------------------------------
...............................................................................................................................................................................................................AACTACCTCCTCCATtcag.......................19TCAG0.330.00---------0.33----------------------------------------------
.....................................................................................................................................................................................................................................ATTCCCAGATCTGTATTtga20TGA0.330.00-------------------0.33------------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGtggc................................................................................................................................................23TGGC0.300.00----0.10-----------------0.10-------------------------------0.10-
........................................................................................AAAAGTAATTGCGGAcgcc..............................................................................................................................................19CGCC0.250.000.25-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGtt...........................................................................................................................................22TT0.250.00-------------------------0.25------------------------------
........................................................................................AAAAGTAATTGCGGATTTcgca...........................................................................................................................................22CGCA0.250.00---0.25----------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGtct..........................................................................................................................................23TCT0.250.000.25-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTgtgc............................................................................................................................................21GTGC0.250.00-------------0.25------------------------------------------
........................................................................................AAAAGTAATTGCGGATctgg.............................................................................................................................................20CTGG0.250.00-0.25------------------------------------------------------
...............................................................................GTTTGGTGCAAAAGTAAcc.......................................................................................................................................................19CC0.250.00-------------------------------0.25------------------------
.........................................................................................AAAGTAATTGCGGATTTgacc...........................................................................................................................................21GACC0.250.00-----0.25--------------------------------------------------
........................................................................................AAAAGTAATTGCGGATat...............................................................................................................................................18AT0.250.00-------------------------------------0.25------------------
........................................................................................AAAAGTAATTGCGGATTTcgct...........................................................................................................................................22CGCT0.250.00---0.25----------------------------------------------------
.......................................................................................CAAAAGTAATTGCGGATTTTcc............................................................................................................................................22CC0.250.00---0.25----------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTact...........................................................................................................................................22ACT0.250.00-----0.25--------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGac...........................................................................................................................................22AC0.250.00--------0.25-----------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGCCt..........................................................................................................................................23T0.250.00-----------0.25--------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTggc............................................................................................................................................21GGC0.250.000.25-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTtgc...........................................................................................................................................22TGC0.250.00-----------------------------------------0.25--------------
........................................................................................AAAAGTAATTGCGGATTTTGaa...........................................................................................................................................22AA0.250.00--------------------------------------------0.25-----------
........................................................................................AAAAGTAATTGCGGATTTgtc............................................................................................................................................21GTC0.250.000.25-------------------------------------------------------
.......................................................................................CAAAAGTAATTGCGGATTTTGgt...........................................................................................................................................23GT0.250.00----------------------------------0.25---------------------
........................................................................................AAAAGTAATTGCGGATTTcgt............................................................................................................................................21CGT0.250.000.25-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTtct...........................................................................................................................................22TCT0.250.00----------------0.25---------------------------------------
.......................................................................................CAAAAGTAATTGCGGATTTcgt............................................................................................................................................22CGT0.250.000.25-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGCtt..........................................................................................................................................23TT0.250.00-----0.25--------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGga...........................................................................................................................................22GA0.250.00---------------------------------0.25----------------------
........................................................................................AAAAGTAATTGCGGATgttg.............................................................................................................................................20GTTG0.250.00-0.25------------------------------------------------------
.................................................................................TTGGTGCAAAAGTAATTGCGtggc................................................................................................................................................24TGGC0.110.00----------------------0.11---------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGcaat................................................................................................................................................23CAAT0.100.00-----------------------------------------------------0.10--
..................................................................................TGGTGCAAAAGTAATTGCGacc.................................................................................................................................................22ACC0.100.00----------------------0.10---------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGaccg................................................................................................................................................23ACCG0.100.00----0.10---------------------------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGaggg................................................................................................................................................23AGGG0.100.00-------------------------------------------------------0.10
TCCTTTCCTGTGTTCCCAAACTTCGTTGATCTTCATCAATCCCTCTGATGTAGATGGCTCCGAAGTTTGCATCCTATTAGTTTGGTGCAAAAGTAATTGCGGATTTTGCCATTAAAAGTAATGGCAAAAATAGCAATTATTTTTGTACCAGCCTAGTATCTTTTCTCCTTCTAACAAAGTTCGTCCCTGATCCATCTCATCACCTATAACTACCTCCTCCATGCAGTTGATTCCCAGATCTGTATTATT
...................................................((((((((((((((....))))))))).....((((......))))..........................................)))))........................................................
...................................................................................................100.................................................................................................199................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR037937(GSM510475)
293cand2. (cell line)		SRR139184(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189785SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR029125(GSM416754)
U2OS. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR029129(GSM416758)
SW480. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR139166(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		TAX577738(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
.......................................................................................................................................................................................caCCTGATCCATCTCATC................................................ 18ca2.000.00--2.00-----------------------------------------------------
..........................................cggTGATGTAGATGGCTC............................................................................................................................................................................................. 18cgg1.000.00------1.00-------------------------------------------------
.........................................................................................cAAGTAATTGCGGATTTTG............................................................................................................................................. 19c0.500.00-0.50------------------------------------------------------
...........................................................................................................................................................................................................taATAACTACCTCCTCC............................. 17ta0.330.00--------------------0.33-----------------------------------
.............................................................................................................................................................................................................atatCTACCTCCTCCATGCAGT...................... 22atat0.330.00------------------0.33-------------------------------------
...............................................................................................gaaGCGGATTTTGCCATT........................................................................................................................................ 18gaa0.330.00----------0.33---------------------------------------------
.........................................................................................................................................ttTTTTTGTACCAGCCTA.............................................................................................. 18tt0.330.00-----0.33--------------------------------------------------
..............................................................................................................................................................................................gcaATCTCATCACCTATAACTACCTCCTCCAT........................... 32gca0.330.00---------------------0.33----------------------------------
...........................gataTTCATCAATCCCTCT........................................................................................................................................................................................................... 19gata0.330.00-----------------0.33--------------------------------------
.......................................................................................gcAAAGTAATTGCGGATTTT.............................................................................................................................................. 20gc0.250.00-0.25------------------------------------------------------
.......................................................................................cgAAAGTAATTGCGGATTTTG............................................................................................................................................. 21cg0.250.00-------0.25------------------------------------------------
.......................................................................................cggAAGTAATTGCGGATTTT.............................................................................................................................................. 20cgg0.250.00-------0.25------------------------------------------------
......................................................................................tcagAAGTAATTGCGGATTT............................................................................................................................................... 20tcag0.250.00---0.25----------------------------------------------------
.........................................................................................caaaTAATTGCGGATTTTG............................................................................................................................................. 19caaa0.250.00-0.25------------------------------------------------------
.......................................................................................tAAAAGTAATTGCGGATTTT.............................................................................................................................................. 20t0.250.00-0.25------------------------------------------------------
....................................................................................ggtCAAAAGTAATTGCGGATTTT.............................................................................................................................................. 23ggt0.250.00-0.25------------------------------------------------------
......................................................................................tCAAAAGTAATTGCGGATTTTG............................................................................................................................................. 22t0.250.00---0.25----------------------------------------------------
.........................................................................................tAAGTAATTGCGGATTTTGCCA.......................................................................................................................................... 22t0.250.00-----------0.25--------------------------------------------
......................................................................................gcagAAGTAATTGCGGATTTTG............................................................................................................................................. 22gcag0.250.000.25-------------------------------------------------------
...............................................................................ttgTGGTGCAAAAGTAATTGCGG................................................................................................................................................... 23ttg0.200.00-------------------------------------------------0.100.10-----
............................................................................................................................CAAAAATAGCAATTATTTT.......................................................................................................... 1970.140.14-0.14------------------------------------------------------
..............................................................................................................................................................................................................................GCAGTTGATTCCCAGATCTG....... 2090.110.11------------------------------------------------0.11-------
...............................................................................aaaTGGTGCAAAAGTAATTGCGG................................................................................................................................................... 23aaa0.100.00---------------------------------------------------0.10----
...............................................................................tggTGGTGCAAAAGTAATTGCGG................................................................................................................................................... 23tgg0.100.00----------------------------------------------------0.10---