ID: hsa-mir-548i-1
chr3:125509197-125509445 -
Display Libraries
(2)
AGO2.ip 		(3)
B-CELL 		(4)
BRAIN 		(7)
BREAST 		(9)
CELL-LINE 		(2)
CERVIX 		(4)
HEART 		(4)
KIDNEY 		(2)
LIVER 		(3)
LUNG 		(5)
OTHER 		(3)
OVARY 		(1)
PLACENTA 		(8)
SKIN 		(2)
THYMUS 		(1)
UTERUS
Showing top 73 reads
TCCTTTCCTGTGTTCCCAAACTTTGTTGATCTTCATCAATCCCTCTGATGCAGATGGCTCTGAAGTTTGCACCCTATTAGGTTGGTGCAAAAGTAATTGCGGATTTTGCCATTAAAAGTAATGGCAAAAATAGCAATTATTTTTGTACCAGCCTAGTATCTTTTCTCCTTCTACCAAACTTTGTCCCTGAGCCATCTCATCACCTATAACTACCTCCTCCATGCAGTTGATTCCCAGATCTGTATTATT
...................................................((((((((((((((....))))))))))....((((......))))....................................))))..(((....)))...................................................
...................................................................................................100.................................................................................................199................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782SRR189787SRR037937(GSM510475)
293cand2. (cell line)		SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189785SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029125(GSM416754)
U2OS. (cell line)		SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR040042(GSM532927)
G428N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR029129(GSM416758)
SW480. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		TAX577738(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
........................................................................................AAAAGTAATTGCGGATTTTGa............................................................................................................................................21A3.000.00---------0.50--0.25--------0.250.25-0.25-0.25-0.25----0.25-----0.250.25--0.25--------------
........................................................................................AAAAGTAATTGCGGATTTTt.............................................................................................................................................20T1.250.00-0.25---0.25-----------------------------0.25-0.25----0.25---------------
........................................................................................AAAAGTAATTGCGGATTTTtcc...........................................................................................................................................22TCC1.000.00----------0.25---0.25----------0.25----------0.25---------------------
........................................................................................AAAAGTAATTGCGGATTTcgtc...........................................................................................................................................22CGTC0.750.000.25-0.50-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTctgt............................................................................................................................................21CTGT0.750.000.75---------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTc.............................................................................................................................................20C0.750.00-0.25----------0.25----------------0.25----------------------------
........................................................................................AAAAGTAATTGCGGATTTcgcc...........................................................................................................................................22CGCC0.750.000.75---------------------------------------------------------
....................................................................................GTGCAAAAGTAATTGCGGAat................................................................................................................................................21AT0.500.00---------------------------0.25----0.25-------------------------
........................................................................................AAAAGTAATTGCGGATTTTtc............................................................................................................................................21TC0.500.00-----0.25--------------------------------------0.25-------------
........................................................................................AAAAGTAATTGCGGATTTTtgtc..........................................................................................................................................23TGTC0.500.00-----------0.50----------------------------------------------
..............................................GATGCAGATGGCTCTGAAGT.......................................................................................................................................................................................2020.500.50-------------0.50--------------------------------------------
............................................................................................................................CAAAAATAGCAATTActaa..........................................................................................................19CTAA0.330.00-0.33--------------------------------------------------------
....................................................................................................................................................................................................................................GATTCCCAGATCTGTgcct..19GCCT0.330.00-------0.33--------------------------------------------------
.........................................................................................................................................................................................................ACCTATAACTACCTCatag.............................19ATAG0.330.00------0.33---------------------------------------------------
...............................................................................................................................................................................................................AACTACCTCCTCCATtca........................18TCA0.330.00----0.33-----------------------------------------------------
...............................................................................................................................................................................................................AACTACCTCCTCCATtcag.......................19TCAG0.330.00------0.33---------------------------------------------------
.....................................................................................................................................................................................................................................ATTCCCAGATCTGTATTtga20TGA0.330.00------------------0.33---------------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGtggc................................................................................................................................................23TGGC0.300.00---------------0.10-----------------------------0.10----------0.10-
........................................................................................AAAAGTAATTGCGGAcgcc..............................................................................................................................................19CGCC0.250.000.25---------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGtt...........................................................................................................................................22TT0.250.00-----------------------0.25----------------------------------
........................................................................................AAAAGTAATTGCGGATTTcgca...........................................................................................................................................22CGCA0.250.00--0.25-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGtct..........................................................................................................................................23TCT0.250.000.25---------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTgtgc............................................................................................................................................21GTGC0.250.00----------0.25-----------------------------------------------
........................................................................................AAAAGTAATTGCGGATctgg.............................................................................................................................................20CTGG0.250.00-0.25--------------------------------------------------------
.........................................................................................AAAGTAATTGCGGATTTgacc...........................................................................................................................................21GACC0.250.00---0.25------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATat...............................................................................................................................................18AT0.250.00----------------------------------0.25-----------------------
........................................................................................AAAAGTAATTGCGGATTTcgct...........................................................................................................................................22CGCT0.250.00--0.25-------------------------------------------------------
.......................................................................................CAAAAGTAATTGCGGATTTTcc............................................................................................................................................22CC0.250.00--0.25-------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTact...........................................................................................................................................22ACT0.250.00---0.25------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGac...........................................................................................................................................22AC0.250.00-----0.25----------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGCCt..........................................................................................................................................23T0.250.00--------0.25-------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTggc............................................................................................................................................21GGC0.250.000.25---------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTtgc...........................................................................................................................................22TGC0.250.00--------------------------------------0.25-------------------
........................................................................................AAAAGTAATTGCGGATTTTGaa...........................................................................................................................................22AA0.250.00-----------------------------------------0.25----------------
........................................................................................AAAAGTAATTGCGGATTTgtc............................................................................................................................................21GTC0.250.000.25---------------------------------------------------------
.......................................................................................CAAAAGTAATTGCGGATTTTGgt...........................................................................................................................................23GT0.250.00-------------------------------0.25--------------------------
........................................................................................AAAAGTAATTGCGGATTTcgt............................................................................................................................................21CGT0.250.000.25---------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTtct...........................................................................................................................................22TCT0.250.00--------------0.25-------------------------------------------
.......................................................................................CAAAAGTAATTGCGGATTTcgt............................................................................................................................................22CGT0.250.000.25---------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGCtt..........................................................................................................................................23TT0.250.00---0.25------------------------------------------------------
........................................................................................AAAAGTAATTGCGGATTTTGga...........................................................................................................................................22GA0.250.00------------------------------0.25---------------------------
........................................................................................AAAAGTAATTGCGGATgttg.............................................................................................................................................20GTTG0.250.00-0.25--------------------------------------------------------
................................................................................GTTGGTGCAAAAGTAATTGCGtc..................................................................................................................................................23TC0.140.00----------------------------------------------0.14-----------
.........................................................................CTATTAGGTTGGTGCAct..............................................................................................................................................................18CT0.110.00------------------------------------------------0.11---------
.................................................................................TTGGTGCAAAAGTAATTGCGtggc................................................................................................................................................24TGGC0.110.00---------------0.11------------------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGcaat................................................................................................................................................23CAAT0.100.00-------------------------------------------------------0.10--
................................................................................GTTGGTGCAAAAGTAATTGCtcgc.................................................................................................................................................24TCGC0.100.00---------------0.10------------------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGacc.................................................................................................................................................22ACC0.100.00---------------0.10------------------------------------------
..................................................................................TGGTGCAAAAGTAATTGCGaccg................................................................................................................................................23ACCG0.100.00---------------------------------------------0.10------------
..................................................................................TGGTGCAAAAGTAATTGCGaggg................................................................................................................................................23AGGG0.100.00---------------------------------------------------------0.10
TCCTTTCCTGTGTTCCCAAACTTTGTTGATCTTCATCAATCCCTCTGATGCAGATGGCTCTGAAGTTTGCACCCTATTAGGTTGGTGCAAAAGTAATTGCGGATTTTGCCATTAAAAGTAATGGCAAAAATAGCAATTATTTTTGTACCAGCCTAGTATCTTTTCTCCTTCTACCAAACTTTGTCCCTGAGCCATCTCATCACCTATAACTACCTCCTCCATGCAGTTGATTCCCAGATCTGTATTATT
...................................................((((((((((((((....))))))))))....((((......))))....................................))))..(((....)))...................................................
...................................................................................................100.................................................................................................199................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782SRR189787SRR037937(GSM510475)
293cand2. (cell line)		SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189785SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR139186(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029125(GSM416754)
U2OS. (cell line)		SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR040042(GSM532927)
G428N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR029129(GSM416758)
SW480. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		TAX577738(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR139185(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139172(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
.........................................................................................cAAGTAATTGCGGATTTTG............................................................................................................................................. 19c0.500.00-0.50--------------------------------------------------------
...........................................................................................................................................................................................................taATAACTACCTCCTCC............................. 17ta0.330.00-------------------0.33--------------------------------------
.............................................................................................................................................................................................................atatCTACCTCCTCCATGCAGT...................... 22atat0.330.00-----------------0.33----------------------------------------
...............................................................................................gaaGCGGATTTTGCCATT........................................................................................................................................ 18gaa0.330.00-------0.33--------------------------------------------------
.........................................................................................................................................ttTTTTTGTACCAGCCTA.............................................................................................. 18tt0.330.00---0.33------------------------------------------------------
..............................................................................................................................................................................................gcaATCTCATCACCTATAACTACCTCCTCCAT........................... 32gca0.330.00--------------------0.33-------------------------------------
...........................gataTTCATCAATCCCTCT........................................................................................................................................................................................................... 19gata0.330.00----------------0.33-----------------------------------------
.......................................................................................gcAAAGTAATTGCGGATTTT.............................................................................................................................................. 20gc0.250.00-0.25--------------------------------------------------------
.......................................................................................cgAAAGTAATTGCGGATTTTG............................................................................................................................................. 21cg0.250.00----0.25-----------------------------------------------------
.......................................................................................cggAAGTAATTGCGGATTTT.............................................................................................................................................. 20cgg0.250.00----0.25-----------------------------------------------------
......................................................................................tcagAAGTAATTGCGGATTT............................................................................................................................................... 20tcag0.250.00--0.25-------------------------------------------------------
.........................................................................................caaaTAATTGCGGATTTTG............................................................................................................................................. 19caaa0.250.00-0.25--------------------------------------------------------
.......................................................................................tAAAAGTAATTGCGGATTTT.............................................................................................................................................. 20t0.250.00-0.25--------------------------------------------------------
....................................................................................ggtCAAAAGTAATTGCGGATTTT.............................................................................................................................................. 23ggt0.250.00-0.25--------------------------------------------------------
......................................................................................tCAAAAGTAATTGCGGATTTTG............................................................................................................................................. 22t0.250.00--0.25-------------------------------------------------------
.........................................................................................tAAGTAATTGCGGATTTTGCCA.......................................................................................................................................... 22t0.250.00--------0.25-------------------------------------------------
......................................................................................gcagAAGTAATTGCGGATTTTG............................................................................................................................................. 22gcag0.250.000.25---------------------------------------------------------
...............................................................................ttgTGGTGCAAAAGTAATTGCGG................................................................................................................................................... 23ttg0.200.00--------------------------------------------------0.10-0.10-----
............................................................................................................................CAAAAATAGCAATTATTTT.......................................................................................................... 1970.140.14-0.14--------------------------------------------------------
..................................................................................................................................................................TTCTCCTTCTACCAAACTTTGTCCCTGAGCCATCTC................................................... 3690.110.11-----------------------------------------------0.11----------
..............................................................................................................................................................................................................................GCAGTTGATTCCCAGATCTG....... 2090.110.11-------------------------------------------------0.11--------
..............................................................................................................................................................................................GCCATCTCATCACCTATAAC....................................... 20100.100.10---------------------------------------------------0.10------
...............................................................................aaaTGGTGCAAAAGTAATTGCGG................................................................................................................................................... 23aaa0.100.00-----------------------------------------------------0.10----
...............................................................................tggTGGTGCAAAAGTAATTGCGG................................................................................................................................................... 23tgg0.100.00------------------------------------------------------0.10---