ID: hsa-mir-548ag-1
chr4:61788287-61788452 +
Display Libraries
(2)
B-CELL
(6)
BRAIN
(7)
BREAST
(5)
CELL-LINE
(3)
CERVIX
(4)
HEART
(1)
HELA
(1)
KIDNEY
(4)
LIVER
(1)
LUNG
(1)
OTHER
(3)
OVARY
(9)
SKIN
(6)
SPLEEN
(2)
THYMUS
(4)
UTERUS
Showing top 60 reads
TATACTTCTGAGAATTTCTCTGAAATATAGAGGCAGATATTATTAGGTTGGTGCAAAGGTAATTGTGGTTTCTGCTTTTAAAGGTAATGGCAAATATTACATTTACTTTTGCACCAACCTAATACATATTCTTCTTAGATTTTCTTAGTCCCTTATTCATCCTCCT
..................................................((((((((((((.((((((...((((.(((....))).))))...)))))).))))))))))))....................................................
..................................................51...............................................................116................................................
SizePerfect hitTotal NormPerfect NormSRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189782SRR189784SRR189787SRR189783SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR139205(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189786SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139202(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR139203(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR139207(SRX050653)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR139206(SRX050644)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029124(GSM416753)
HeLa. (hela)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139184(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR139219(SRX050655)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040032(GSM532917)
G603N. (cervix)
SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR139217(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR139194(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191483(GSM715593)
11genomic small RNA (size selected RNA from t. (breast)
SRR189785
......................................................AAAGGTAATTGTGGTTTCTGC...........................................................................................21231.5031.5018.001.00-0.501.503.00----1.000.501.00---------------0.50---0.50----0.500.50----0.50-----0.50-0.50-0.500.50---0.50------
......................................................AAAGGTAATTGTGGTTTCTG............................................................................................20213.5013.503.007.50--2.00----------------------------0.50----------0.50--------------------
......................................................AAAGGTAATTGTGGTTTCT.............................................................................................19210.5010.506.500.50---------1.00------------------0.50----0.50------0.50---------0.50---------0.50--
......................................................AAAGGTAATTGTGGTTTC..............................................................................................1828.008.000.50-------2.002.00---1.50-------1.00-------0.50-------------------------0.50---------
......................................................AAAGGTAATTGTGGTTTCTGa...........................................................................................21A4.5013.502.00--------------1.00------------------------0.50------------------0.500.50----
......................................................AAAGGTAATTGTGGTTTCTGCa..........................................................................................22A3.0031.500.500.50---------0.50---------------------------0.50--------0.50--------0.50-------
......................................................AAAGGTAATTGTGGTTTCTtcc..........................................................................................22TCC2.5010.500.50------------------------------0.50-------------0.500.50--------------0.50---
......................................................AAAGGTAATTGTGGTTTCTGaa..........................................................................................22AA2.0013.502.00----------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCcgcc..........................................................................................22CGCC1.508.000.50--0.50----------0.50--------------------------------------------------
....................................................GCAAAGGTAATTGTGGTTTCTG............................................................................................2221.501.50--1.50--------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCTGt...........................................................................................21T1.5013.500.50------0.50--------------------------0.50------------------------------
....................................................GCAAAGGTAATTGTGGTTTCTGt...........................................................................................23T1.001.501.00----------------------------------------------------------------
...................................................................................................CATTTACTTTTGCACatct................................................19ATCT1.000.00--1.00--------------------------------------------------------------
..........................................................................................CAAATATTACATTTACagtt........................................................20AGTT1.000.00-------------------1.00---------------------------------------------
......................................................AAAGGTAATTGTGGTTTCTGCT..........................................................................................2211.001.00---1.00-------------------------------------------------------------
................................................................................................TTACATTTACTTTTGCttc...................................................19TTC1.000.00----------------------1.00------------------------------------------
......................................................AAAGGTAATTGTGGTTTCTat...........................................................................................21AT0.5010.50-------0.50---------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTttga...........................................................................................21TTGA0.500.00---0.50-------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTctgc............................................................................................20CTGC0.500.00-0.50---------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCgg............................................................................................20GG0.508.00-0.50---------------------------------------------------------------
.....................................................CAAAGGTAATTGTGGTTTtgt............................................................................................21TGT0.500.00------------------------------------0.50----------------------------
......................................................AAAGGTAATTGTGGTTgcc.............................................................................................19GCC0.500.000.50----------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTatg............................................................................................20ATG0.500.00-0.50---------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCTGgc..........................................................................................22GC0.5013.50---0.50-------------------------------------------------------------
......................................................AAAGGTAATTGTGGTgtct.............................................................................................19GTCT0.500.000.50----------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCTtcca.........................................................................................23TCCA0.5010.50----------0.50------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTtag............................................................................................20TAG0.500.00-0.50---------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCcggc..........................................................................................22CGGC0.508.00---0.50-------------------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCTtcct.........................................................................................23TCCT0.5010.50------------0.50----------------------------------------------------
......................................................AAAGGTAATTGTGGTTTCTtc...........................................................................................21TC0.5010.50----------0.50------------------------------------------------------
.....................................................CAAAGGTAATTGTGGTTa...............................................................................................18A0.500.00-----------------------------------------------0.50-----------------
......................................................AAAGGTAATTGTGGTTTCa.............................................................................................19A0.508.000.50----------------------------------------------------------------
.....................................................CAAAGGTAATTGTGGTTTttga...........................................................................................22TTGA0.500.00--------------------------------------------------------0.50--------
......................................................AAAGGTAATTGTGGTTTCTaa...........................................................................................21AA0.5010.50------------------0.50----------------------------------------------
.....................................................CAAAGGTAATTGTGGTTaa..............................................................................................19AA0.500.00------------------0.50----------------------------------------------
..........................................................................................................................TACATATTCTTCTTAG............................1650.200.20----------------------------------------------------------------0.20
TATACTTCTGAGAATTTCTCTGAAATATAGAGGCAGATATTATTAGGTTGGTGCAAAGGTAATTGTGGTTTCTGCTTTTAAAGGTAATGGCAAATATTACATTTACTTTTGCACCAACCTAATACATATTCTTCTTAGATTTTCTTAGTCCCTTATTCATCCTCCT
..................................................((((((((((((.((((((...((((.(((....))).))))...)))))).))))))))))))....................................................
..................................................51...............................................................116................................................
SizePerfect hitTotal NormPerfect NormSRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189782SRR189784SRR189787SRR189783SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR139205(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139173(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189786SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139202(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR139203(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR139207(SRX050653)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR139206(SRX050644)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029124(GSM416753)
HeLa. (hela)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR139191(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR139184(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR139219(SRX050655)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040032(GSM532917)
G603N. (cervix)
SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR139217(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR139194(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191483(GSM715593)
11genomic small RNA (size selected RNA from t. (breast)
SRR189785
..................................................tTGCAAAGGTAATTGTGGTTT............................................................................................... 21t4.000.00------2.00-------------0.50-----1.000.50-------------------------------------
..............................................................................................................tatgCAACCTAATACATAT..................................... 19tatg1.000.00----------------1.00------------------------------------------------
..................................................................................................tgtTTTACTTTTGCACCAACCT.............................................. 22tgt1.000.00-------1.00---------------------------------------------------------
................................................aGGTGCAAAGGTAATTGTGGTT................................................................................................ 22a1.000.00------------------------1.00----------------------------------------
......................................cTTATTAGGTTGGTGCAAAGGTAATTG..................................................................................................... 27c1.000.00--1.00--------------------------------------------------------------
.................................................atTGCAAAGGTAATTGTGGTTT............................................................................................... 22at1.000.00-----------------1.00-----------------------------------------------
.................................................ggaGCAAAGGTAATTGTGGT................................................................................................. 20gga0.500.00--------------0.50--------------------------------------------------
..................................................tTGCAAAGGTAATTGTGGTTTCT............................................................................................. 23t0.500.00--------------0.50--------------------------------------------------
..................................................cTGCAAAGGTAATTGTGGTTT............................................................................................... 21c0.500.00-----------------------0.50-----------------------------------------
................................................atGTGCAAAGGTAATTGT.................................................................................................... 18at0.500.00--0.50--------------------------------------------------------------
.................................................aGTGCAAAGGTAATTGTGGTTTC.............................................................................................. 23a0.500.00--------------------0.50--------------------------------------------
....................................tataTATTAGGTTGGTGCAAAGGTAATTG..................................................................................................... 29tata0.500.00--0.50--------------------------------------------------------------
........................................ctgTAGGTTGGTGCAAAGGTAATTG..................................................................................................... 25ctg0.500.00--0.50--------------------------------------------------------------
.................................................ttttCAAAGGTAATTGTGGTTT............................................................................................... 22tttt0.500.00------0.50----------------------------------------------------------
..................................................tTGCAAAGGTAATTGTGGTT................................................................................................ 20t0.500.00--------------------------------------------------0.50--------------
....................................................gcacAGGTAATTGTGGTTT............................................................................................... 19gcac0.500.00-----------------------------------------0.50-----------------------
..................................................ttgtAAAGGTAATTGTGGTTT............................................................................................... 21ttgt0.500.00-------------------------0.50---------------------------------------
.................................................tggtCAAAGGTAATTGTGGT................................................................................................. 20tggt0.500.00-----------------------0.50-----------------------------------------
...............................................gTGGTGCAAAGGTAATTGTGGTTT............................................................................................... 24g0.500.00-------------------------0.50---------------------------------------
.................................................ttTGCAAAGGTAATTGTGGTT................................................................................................ 21tt0.500.00---------------------------0.50-------------------------------------
..........................................gaAGGTTGGTGCAAAGGTAAT....................................................................................................... 21ga0.330.00-0.33---------------------------------------------------------------
.........................................gtgAGGTTGGTGCAAAGGTAAT....................................................................................................... 22gtg0.330.00---------------------------------------------------------------0.33-
............................................atgcTGGTGCAAAGGTAATTG..................................................................................................... 21atgc0.250.00--0.25--------------------------------------------------------------
.............................................ttaaGGTGCAAAGGTAATT...................................................................................................... 19ttaa0.200.00--0.20--------------------------------------------------------------
........................................................................................................cagTTTGCACCAACCTAATACA........................................ 22cag0.170.00-------0.17---------------------------------------------------------