| (1) AGO1.ip | (1) AGO2.ip | (5) B-CELL | (16) CELL-LINE | (1) FIBROBLAST | (2) HEART | (3) HELA | (1) LIVER | (4) OTHER | (6) SKIN | (1) UTERUS | (1) XRN.ip |
| CAGCATCCCAGCTCCTCAGGTGAATTAATACATGGCCAAGCCCTAAGCCTGCTCTAGCCTAATTTTAGATCTGGTCTGCTTCAGTTTCACTCCAAGCAGACTTGACCTACAATTAGCCTAGAGCAGAACTAAGGTGATCTGTGTGCTTTCTCCCCACCTGACAGAAGAAAATGT ..................................................((.((((((.(((.((.(((((((((.((.....))..))))))))).)).))).)))))).))....................................................... .......................................................56..................................................................124................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | DRR001489(DRX001043) Hela short nuclear cell fraction, control. (hela) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR189786 | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR037936(GSM510474) 293cand1. (cell line) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | DRR001482(DRX001036) Hela long total cell fraction, control. (hela) | DRR001488(DRX001042) Hela short nuclear cell fraction, LNA(+). (hela) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR330881(SRX091719) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR189785 | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | GSM541797(GSM541797) differentiated human embryonic stem cells. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................AATTTTAGATCTGGTCTGCTT............................................................................................. | 21 | 2 | 15.00 | 15.00 | 0.50 | 3.50 | 3.00 | - | 1.50 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | 0.50 | - | 0.50 | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTCTGCT.............................................................................................. | 21 | 2 | 6.50 | 6.50 | - | - | - | 4.50 | - | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ............................................................AATTTTAGATCTGGTCTGCT.............................................................................................. | 20 | 2 | 6.00 | 6.00 | - | - | 1.00 | - | 1.00 | - | 0.50 | 2.00 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTCTGCTT............................................................................................. | 22 | 2 | 4.50 | 4.50 | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | 0.50 | 0.50 | - | - | 0.50 | - | - | - | 0.50 | - | - | - | - | - | 0.50 | - |
| ..............................................................................................AGCAGACTTGACCTACAATTAG.......................................................... | 22 | 2 | 4.00 | 4.00 | 2.50 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTCTG................................................................................................ | 19 | 2 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTCTGCTTa............................................................................................ | 23 | A | 1.50 | 4.50 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................AGCAGACTTGACCTACAATTA........................................................... | 21 | 2 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTC.................................................................................................. | 17 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................AATTTTAGATCTGGTCTGCTTC............................................................................................ | 22 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................AGACTTGACCTACAATTAG.......................................................... | 19 | 2 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTCTGC............................................................................................... | 20 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................AATTTTAGATCTGGTCTGCa.............................................................................................. | 20 | A | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................AATTTTAGATCTGGTCTGCTc............................................................................................. | 21 | C | 0.50 | 6.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTCTGCTTaa........................................................................................... | 24 | AA | 0.50 | 4.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| .................................................................................................AGACTTGACCTACAATTAGC......................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ....................................................................................TTTCACTCCAAGCAGACTTGACCTAC................................................................ | 26 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................AGCAGACTTGACCTACAAatag.......................................................... | 22 | ATAG | 0.50 | 0.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................AGGTGATCTGTGTGCaaca........................ | 19 | AACA | 0.50 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................CCTAATTTTAGATCTGGTCTGCT.............................................................................................. | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ...........................................................................CTGCTTCAGTTTCACatt................................................................................. | 18 | ATT | 0.50 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................AATTTTAGATCTGGTCTGC............................................................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ...........................................................TAATTTTAGATCTGGTCTGCTaaa........................................................................................... | 24 | AAA | 0.50 | 6.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................AGCAGACTTGACCTACAActat.......................................................... | 22 | CTAT | 0.50 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................ATTTTAGATCTGGTCTGCTT............................................................................................. | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| .....................................................................................................................CTAGAGCAGAACTAAGGTGATC................................... | 22 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TAATTTTAGATCTGGTCTGCTTtc........................................................................................... | 24 | TC | 0.50 | 4.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................AATTTTAGATCTGGTCTGCTTt............................................................................................ | 22 | T | 0.50 | 15.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGCATCCCAGCTCCTCAGGTGAATTAATACATGGCCAAGCCCTAAGCCTGCTCTAGCCTAATTTTAGATCTGGTCTGCTTCAGTTTCACTCCAAGCAGACTTGACCTACAATTAGCCTAGAGCAGAACTAAGGTGATCTGTGTGCTTTCTCCCCACCTGACAGAAGAAAATGT ..................................................((.((((((.(((.((.(((((((((.((.....))..))))))))).)).))).)))))).))....................................................... .......................................................56..................................................................124................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | DRR001489(DRX001043) Hela short nuclear cell fraction, control. (hela) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR189786 | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR037936(GSM510474) 293cand1. (cell line) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | DRR001482(DRX001036) Hela long total cell fraction, control. (hela) | DRR001488(DRX001042) Hela short nuclear cell fraction, LNA(+). (hela) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR330881(SRX091719) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR189785 | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | GSM541797(GSM541797) differentiated human embryonic stem cells. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ttagATCCCAGCTCCTCAG........................................................................................................................................................... | 19 | ttag | 0.50 | 0.00 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....ttaCCAGCTCCTCAGGTG........................................................................................................................................................ | 18 | tta | 0.50 | 0.00 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................gcttCCTGACAGAAGAAAAT.. | 20 | gctt | 0.50 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |