ID: hsa-mir-4744
chr18:46576007-46576188 -
Display Libraries
(1)
AGO1.ip OTHER.mut 		(7)
B-CELL 		(1)
BREAST 		(17)
CELL-LINE 		(1)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(1)
OTHER 		(4)
SKIN 		(3)
UTERUS 		(1)
XRN.ip
Showing top 23 reads
TATCCATTTGGGTGCATAAGAGAAATGGGCTTGTAAGAGAAATGGGCTCTGTAATCACATCTAAAGACTAGACTTCGCTATGACCAGGCCATAGTAAACATCATAGTATGTCTAGTCTTTAGGTTTGATTACAGAACATTATAAGAGCATCCCTTATACTTGCATGTCATTTTAATGTCAGT
..................................................(((((((.(((((((((((((((...(((((((....((....)).....)))))))..))))))))))))))).)))))))..................................................
..................................................51...............................................................................132................................................
SizePerfect hitTotal NormPerfect NormSRR037936(GSM510474)
293cand1. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR139176(SRX050650)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
...........................................................TCTAAAGACTAGACTTCGCTAT.....................................................................................................22115.0015.002.00-1.002.00-1.00-1.002.00-1.001.001.00-2.00---------1.00--------------------
...........................................................TCTAAAGACTAGACTTCGCTATG....................................................................................................23114.0014.00-1.00---1.002.001.00----1.00-------1.001.001.00----1.001.00--1.001.00----1.00-------
...........................................................TCTAAAGACTAGACTTCGCTATGA...................................................................................................2418.008.00------1.00---1.00----1.00-1.00-1.00----------1.00-----1.00-1.00------
...........................................................TCTAAAGACTAGACTTCGCTA......................................................................................................2114.004.00---------1.00-1.00---------------------1.00-------1.00---
......................................................................................................ATAGTATGTCTAGTCTTTAGGTT.........................................................2313.003.00----3.00----------------------------------------
......................................................................................................ATAGTATGTCTAGTCTTTAGGT..........................................................2213.003.001.00----------------------------------1.00----1.00----
...........................................................TCTAAAGACTAGACTTCGCTATc....................................................................................................23C2.0015.00-1.00----------------1.00--------------------------
.............................................................TAAAGACTAGACTTCGCTAT.....................................................................................................2012.002.00--2.00------------------------------------------
...........................................................TCTAAAGACTAGACTTCGCTATGACCAGGCC............................................................................................3111.001.00----------------1.00----------------------------
......................................................................................................................TTAGGTTTGATTACAcacc.............................................19CACC1.000.00-----------------------------1.00---------------
...........................................................TCTAAAGACTAGACTTCGattt.....................................................................................................22ATTT1.000.00---1.00-----------------------------------------
.............................................................TAAAGACTAGACTTCGCTATG....................................................................................................2111.001.00---------1.00-----------------------------------
...........................................................TCTAAAGACTAGACTTCGCTATGAa..................................................................................................25A1.008.00--------------------------1.00------------------
......................................................................................................ATAGTATGTCTAGTCTTTAGG...........................................................2111.001.00-------------1.00-------------------------------
......................................................................................................ATAGTATGTCTAGTCTTcagg...........................................................21CAGG1.000.00-------------1.00-------------------------------
............................................................CTAAAGACTAGACTTCGCTATGA...................................................................................................2311.001.00-------------------------1.00-------------------
...........................................................TCTAAAGACTAGACTTCGCT.......................................................................................................2011.001.00-----1.00---------------------------------------
...............................................TCTGTAATCACATCTAAAGA...................................................................................................................2011.001.00----------------------------------1.00----------
...........................................................TCTAAAGACTAGACTTCGCTATGt...................................................................................................24T1.0014.00-1.00-------------------------------------------
.................................................................................................................................................AGCATCCCTTATACTTaa...................18AA1.000.00------------------------------------------1.00--
...............................................TCTGTAATCACATCTAAAGACT.................................................................................................................2211.001.00---------------------------------------1.00-----
......................AAATGGGCTTGTAAG.................................................................................................................................................1550.200.20-------------------------------------------0.20-
..........................GGGCTTGTAAGAGAA.............................................................................................................................................1590.110.11--------------------------------------------0.11
TATCCATTTGGGTGCATAAGAGAAATGGGCTTGTAAGAGAAATGGGCTCTGTAATCACATCTAAAGACTAGACTTCGCTATGACCAGGCCATAGTAAACATCATAGTATGTCTAGTCTTTAGGTTTGATTACAGAACATTATAAGAGCATCCCTTATACTTGCATGTCATTTTAATGTCAGT
..................................................(((((((.(((((((((((((((...(((((((....((....)).....)))))))..))))))))))))))).)))))))..................................................
..................................................51...............................................................................132................................................
SizePerfect hitTotal NormPerfect NormSRR037936(GSM510474)
293cand1. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR139176(SRX050650)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
.....................................................................................tcaCCATAGTAAACATCATAG............................................................................ 21tca1.000.00-----------------------1.00---------------------