ID: hsa-mir-4686
chr11:2194243-2194418 +
Display Libraries
(1)
AGO2.ip 		(6)
BREAST 		(8)
CELL-LINE 		(1)
HEART 		(12)
LIVER 		(1)
LUNG 		(1)
OTHER 		(1)
SKIN 		(1)
TESTES
Showing top 30 reads
GCTGCCACCGCTGTCCCTCCTGGAGAAGAACCGTTTCCGACAGGGCTTGGGGCTTCCTGTATCTGCTGGGCTTTCTGGTGTTGGCAGCCCAAGATGACACCCTGGGCCCAGCAGGAGCCAGAAGCCCTAGACGCTCCCTGACTTCTCGAAGGCCTACCCCGGCTGGTCACTGTGGC
..................................................((((((..((.((((((((((((...((((((((....))).....)))))..)))))))))))).))..))))))..................................................
..................................................51.........................................................................126................................................
SizePerfect hitTotal NormPerfect NormSRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR029129(GSM416758)
SW480. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR139208(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR139179(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139188(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR189782SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
...........................................................TATCTGCTGGGCTTTCTGGTGTT..............................................................................................23150.0050.008.003.002.008.006.006.002.003.004.00-2.002.00--2.001.00--------1.00------
...........................................................TATCTGCTGGGCTTTCTGGTGT...............................................................................................22113.0013.003.001.002.00---2.00---1.00-1.00-----1.00---1.00----1.00---
...........................................................TATCTGCTGGGCTTTCTGGTG................................................................................................2118.008.004.002.001.00--------------1.00-------------
...........................................................TATCTGCTGGGCTTTCTGGTGa...............................................................................................22A4.008.001.001.00--------------2.00--------------
...........................................................TATCTGCTGGGCTTTCTGGTGTTt.............................................................................................24T4.0050.00-1.00-------1.00-----1.00---1.00-----------
...........................................................TATCTGCTGGGCTTTCTGGTGTTa.............................................................................................24A4.0050.002.00-2.00----------------------------
...........................................................TATCTGCTGGGCTTTCTGGT.................................................................................................2013.003.00--1.00------1.00--1.00------------------
...........................................................TATCTGCTGGGCTTTCTGG..................................................................................................1922.502.501.001.00----0.50------------------------
...........................................................TATCTGCTGGGCTTTCTGGTa................................................................................................21A2.003.002.00------------------------------
...........................................................TATCTGCTGGGCTTTCTGGTGTa..............................................................................................23A2.0013.001.00------1.00-----------------------
...........................................................TATCTGCTGGGCTTTCTGGTGTTag............................................................................................25AG2.0050.00--1.00--------------1.00-------------
............................................................................................................CAGCAGGAGCCAGAAcagg.................................................19CAGG1.000.00-----------------------1.00-------
...........................................................TATCTGCTGGGCTTTCTGGTGTTGt............................................................................................25T1.001.00-------------------------1.00-----
...........................................................TATCTGCTGGGCTTTCTGGTGg...............................................................................................22G1.008.001.00------------------------------
.............TCCCTCCTGGAGAAGAccc................................................................................................................................................19CCC1.000.00--------------------------1.00----
...........................................................TATCTGCTGGGCTTTCgagc.................................................................................................20GAGC1.000.00----1.00--------------------------
...........................................................TATCTGCTGGGCTTTCTGGTGTTatt...........................................................................................26ATT1.0050.00--------------------1.00----------
................................................................................................ACACCCTGGGCCCAGCAGGAat..........................................................22AT1.000.00------1.00------------------------
...........................................................TATCTGCTGGGCTTTCTGGTGc...............................................................................................22C1.008.00-1.00-----------------------------
...........................................................TATCTGCTGGGCTTTCTGGTGTTG.............................................................................................2411.001.00---------1.00---------------------
.CTGCCACCGCTGTCCCcc.............................................................................................................................................................18CC1.000.00----------------------------1.00--
...........................................................TATCTGCTGGGCTTTCTGGTGTag.............................................................................................24AG1.0013.00-1.00-----------------------------
......................................................................................................................................TCCCTGACTTCTCGAcaac.......................19CAAC1.000.00---------------------1.00---------
...........................................................TATCTGCTGGGCTTTCTGGcg................................................................................................21CG0.502.500.50------------------------------
...........................................................TATCTGCTGGGCTTTCTGGagtt..............................................................................................23AGTT0.502.50----0.50--------------------------
...........................................................TATCTGCTGGGCTTTCTGGgg................................................................................................21GG0.502.50-0.50-----------------------------
...........................................................TATCTGCTGGGCTTTCTG...................................................................................................1820.500.50-----------------------------0.50-
.................................................................................................CACCCTGGGCCCAGCAGGAGC..........................................................2120.500.50------------------0.50------------
GCTGCCACCGCTGTCCCTCCTGGAGAAGAACCGTTTCCGACAGGGCTTGGGGCTTCCTGTATCTGCTGGGCTTTCTGGTGTTGGCAGCCCAAGATGACACCCTGGGCCCAGCAGGAGCCAGAAGCCCTAGACGCTCCCTGACTTCTCGAAGGCCTACCCCGGCTGGTCACTGTGGC
..................................................((((((..((.((((((((((((...((((((((....))).....)))))..)))))))))))).))..))))))..................................................
..................................................51.........................................................................126................................................
SizePerfect hitTotal NormPerfect NormSRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR029129(GSM416758)
SW480. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR139208(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR139179(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139188(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR189782SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................ttgGAAGCCCTAGACGCT......................................... 18ttg1.000.00-------------1.00-----------------
.....................................................................................................................atAGAAGCCCTAGACGCT......................................... 18at1.000.00-------------1.00-----------------
............................................................ATCTGCTGGGCTTTCTG................................................................................................... 1760.170.17------------------------------0.17