ID: hsa-mir-4653
chr7:100802704-100802886 +
Display Libraries
(2)
AGO2.ip
(2)
B-CELL
(11)
BREAST
(26)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(1)
HELA
(1)
KIDNEY
(3)
LIVER
(1)
OTHER
(17)
SKIN
(1)
TESTES
(3)
THYMUS
(1)
UTERUS
(1)
XRN.ip
Showing top 57 reads
CTCTGTCCTTCTCCCAAGCCCCCAGATGTCTCGTGGCCACCCAGTCTCCTTTGTCCAATTCTCTGAGCAAGGCTTAACACCAAAGGGTTAAGGGTTTGCTCTGGAGTTAAGGGTTGCTTGGAGAATTGGAGAAGGGGCACCTGGTAGGTCATTCTTTTCTTCCCTGATTTCTTCCCCCACCTC
..................................................(((((((..(((((..((((((.((..(((((.........))))))).))))))..)))))..)))))))...................................................
........................................................57.....................................................................128.....................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR029128(GSM416757)
H520. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR040028(GSM532913)
G026N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
SRR037931(GSM510469)
293GFP. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038858(GSM458541)
MEL202. (cell line)
SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR189786SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
.....................................................................................................TGGAGTTAAGGGTTGCTTGGAGA...........................................................23115.0015.002.00--4.001.00---1.00----1.00----------1.00---------1.00------------------1.001.00----1.00-------------1.00-
.............................................................TCTGAGCAAGGCTTAACACCAgt...................................................................................................23GT9.008.00----------1.00--1.001.00------2.00-----------1.00-1.00-------------1.00------------------1.00------
.............................................................TCTGAGCAAGGCTTAACACCA.....................................................................................................2118.008.00--------------1.00----1.002.00----2.00--1.00-1.00--------------------------------------------
...............................................................TGAGCAAGGCTTAACACCAgag..................................................................................................22GAG8.000.00----3.00-------1.001.00--1.00---------------1.00--------------------------------1.00---------
......................................................................................................GGAGTTAAGGGTTGCTTGGAGA...........................................................2215.005.00---3.00--------1.00-----------------------1.00--------------------------------------
.......................................................................................................GAGTTAAGGGTTGCTTGGAGA...........................................................2115.005.00---1.00-------------1.00-----1.00--------------------------1.00---------1.00--------------
.....................................................................................................TGGAGTTAAGGGTTGCTTGGAG............................................................2214.004.00----1.00----------------------------------------------------------1.001.00------1.00---
.............................................................TCTGAGCAAGGCTTAACACC......................................................................................................2014.004.00---------------1.00-------1.00--1.00---------------------------------------------1.00--
.......................................................................................................GAGTTAAGGGTTGCTTGGAGAA..........................................................2213.003.00-----------------------------1.00--------1.00-----------------1.00------------------
.............................................................TCTGAGCAAGGCTTAACACCAga...................................................................................................23GA3.008.00----------2.00--------------------------------------------------------1.00-------
....................................................................................................CTGGAGTTAAGGGTTGCTTGGA.............................................................2212.002.00------------------1.00---------------------------------------1.00----------------
.....................................................................................................TGGAGTTAAGGGTTGCTTGGAa............................................................22A2.000.00-----------------1.00-------------------1.00-------------------------------------
.....................................................................................................TGGAGTTAAGGGTTGCTTGGAGAA..........................................................2412.002.00----1.00---------------------------------------1.00------------------------------
...............................................................TGAGCAAGGCTTAACACCAgaga.................................................................................................23GAGA2.000.00----1.00-------1.00--------------------------------------------------------------
.......................................................................................................GAGTTAAGGGTTGCTTGGAG............................................................2012.002.00---1.00--------------------------------------------------------------1.00--------
.............................................................TCTGAGCAAGGCTTAACACCAg....................................................................................................22G1.008.00---------------------------------------1.00-----------------------------------
...........................................................TCTCTGAGCAAGGCTTAACACC......................................................................................................2211.001.00------------------1.00--------------------------------------------------------
...............................................................TGAGCAAGGCTTAACACCAga...................................................................................................21GA1.000.00----------------1.00----------------------------------------------------------
..................................................................................................................TGCTTGGAGAATTGGAGA...................................................1811.001.00--------1.00------------------------------------------------------------------
...........................................................TCTCTGAGCAAGGCTTAACA........................................................................................................2011.001.00-------------------------------1.00-------------------------------------------
.............................................................TCTGAGCAAGGCTTAACACCAA....................................................................................................2211.001.00----------------------------------------------------------------------1.00----
.....................................................................................................TGGAGTTAAGGGTTGCTTGGtga...........................................................23TGA1.000.00----1.00----------------------------------------------------------------------
.......................................................................................................GAGTTAAGGGTTGCTTGGAtat..........................................................22TAT1.000.00------------------------------------------------1.00--------------------------
......................................................................................................GGAGTTAAGGGTTGCTTGGAG............................................................2111.001.00-------------------------------------------------------1.00-------------------
....................................................................................GGGTTAAGGGTTTGCTCTGGAGTTAAGGGT.....................................................................3011.001.00-------------------1.00-------------------------------------------------------
.................................................................................................................TTGCTTGGAGAATTGGAGAA..................................................2011.001.00--------1.00------------------------------------------------------------------
......................................................................................................................................................ATTCTTTTCTTCCCTGcagc.............20CAGC1.000.00---------------------------------------------------1.00-----------------------
.....................................................................................................TGGAGTTAAGGGTTGCTTGGAGAt..........................................................24T1.0015.00--------------------------1.00------------------------------------------------
....................................................................................................................................................TCATTCTTTTCTTCCtcg.................18TCG1.000.00---------------------------------------------------------------------1.00-----
.......................................................................................................................................................TTCTTTTCTTCCCTGgacg.............19GACG1.000.00----------------------------------------------------1.00----------------------
...........................................................TCTCTGAGCAAGGCTTAACAC.......................................................................................................2111.001.00--------------------------------------------------------------1.00------------
.......................................................................................................GAGTTAAGGGTTGCTTGGAGAt..........................................................22T1.005.00---------------------------------------------1.00-----------------------------
.......................................................................................................GAGTTAAGGGTTGCTTGGAGAAa.........................................................23A1.003.00------------------------------------------1.00--------------------------------
.............................................................TCTGAGCAAGGCTTAACAC.......................................................................................................1911.001.00----1.00----------------------------------------------------------------------
....................................................................................................CTGGAGTTAAGGGTTGCTTGG..............................................................2111.001.00---------------------------1.00-----------------------------------------------
.....................................................................................................TGGAGTTAAGGGTTGCTTGGAGg...........................................................23G1.004.00-------------------------------------------------------------1.00-------------
.......................................................................................................GAGTTAAGGGTTGCTTGG..............................................................1811.001.00--------1.00------------------------------------------------------------------
.................................................................................................................TTGCTTGGAGAATTGGA.....................................................1711.001.00--------1.00------------------------------------------------------------------
...............................................................TGAGCAAGGCTTAACACCAAAG..................................................................................................2211.001.00-----------------------------------------------1.00---------------------------
.............................................................TCTGAGCAAGGCTTAACACCAAt...................................................................................................23T1.001.00---------------1.00-----------------------------------------------------------
.....................................................................................................TGGAGTTAAGGGTTGCTT................................................................1820.500.50--------------------------------------------------------------------------0.50
.....................................................................................................................TTGGAGAATTGGAGAAG.................................................1730.330.33--------------0.33------------------------------------------------------------
CTCTGTCCTTCTCCCAAGCCCCCAGATGTCTCGTGGCCACCCAGTCTCCTTTGTCCAATTCTCTGAGCAAGGCTTAACACCAAAGGGTTAAGGGTTTGCTCTGGAGTTAAGGGTTGCTTGGAGAATTGGAGAAGGGGCACCTGGTAGGTCATTCTTTTCTTCCCTGATTTCTTCCCCCACCTC
..................................................(((((((..(((((..((((((.((..(((((.........))))))).))))))..)))))..)))))))...................................................
........................................................57.....................................................................128.....................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR029128(GSM416757)
H520. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR139165(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)
SRR040028(GSM532913)
G026N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
SRR037931(GSM510469)
293GFP. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038858(GSM458541)
MEL202. (cell line)
SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR189786SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
............................................ccatCTTTGTCCAATTCTCT....................................................................................................................... 20ccat134.000.0093.0011.0012.00--5.004.006.00-1.00-2.00---------------------------------------------------------------
.............................................catCTTTGTCCAATTCTCT....................................................................................................................... 19cat21.000.004.0012.001.00--3.00-----1.00---------------------------------------------------------------
............................................ccatCTTTGTCCAATTCTC........................................................................................................................ 19ccat5.000.004.00-----1.00--------------------------------------------------------------------
..............................................atCTTTGTCCAATTCTCT....................................................................................................................... 18at4.000.00-4.00-------------------------------------------------------------------------
............................................tcatCTTTGTCCAATTCTCT....................................................................................................................... 20tcat2.000.00---------2.00-----------------------------------------------------------------
...............................................gccTTGTCCAATTCTCTG...................................................................................................................... 18gcc2.000.00-----------------------------------------1.00----1.00----------------------------
...............................................cagaTGTCCAATTCTCTGAG.................................................................................................................... 20caga2.000.00----------------------2.00----------------------------------------------------
.............................................catCTTTGTCCAATTCTC........................................................................................................................ 18cat2.000.00-2.00-------------------------------------------------------------------------
............................................ccagCTTTGTCCAATTCTCT....................................................................................................................... 20ccag1.000.001.00--------------------------------------------------------------------------
............................................ccagCTTTGTCCAATTCTC........................................................................................................................ 19ccag1.000.00-1.00-------------------------------------------------------------------------
............................................ccaCCTTTGTCCAATTCTCT....................................................................................................................... 20cca1.000.001.00--------------------------------------------------------------------------
............................................acatCTTTGTCCAATTCTCT....................................................................................................................... 20acat1.000.00------1.00--------------------------------------------------------------------
................................................CTTTGTCCAATTCTCTGAGCAAGG............................................................................................................... 2411.001.00------------------------1.00--------------------------------------------------
.......................................................................................................................................................attTTTTCTTCCCTGATTTC............ 20att1.000.00----------------------------------------1.00----------------------------------
.........................................................................................................................cgttTTGGAGAAGGGGCACCT......................................... 21cgtt1.000.00---------------------------------------------------------1.00-----------------
...................................................TGTCCAATTCTCTGAGCAAGG............................................................................................................... 2111.001.00-------------------------------------------1.00-------------------------------