ID: hsa-mir-4652
chr7:93346190-93346367 +
Display Libraries
(1)
AGO2.ip 		(3)
B-CELL 		(6)
BREAST 		(26)
CELL-LINE 		(2)
CERVIX 		(6)
HELA 		(2)
LIVER 		(1)
OTHER 		(1)
SKIN 		(1)
UTERUS
Showing top 83 reads
GTAGTGATGAGAGTGATAATGGCCAACAGTGATTCAGAATCGTTTGACTCTATTGGACGAGGGGACTGGTTAATAGAACTAACTAACCAGAACTATTTTGTTCTGTTAACCCATCCCCTCATCTAATAGAGTATAAACCTCAATATAAGCTCAACTAGGCTGAGTAAGGCCAAACAAG
..................................................(((((((.(((((((..((((((((((((....................))))))))))))..))))))).)))))))..................................................
..................................................51...........................................................................128................................................
SizePerfect hitTotal NormPerfect NormSRR189782DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189787SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR189785SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
...........................................................AGGGGACTGGTTAATAGAACTA.................................................................................................221294.00294.009.0048.0030.0040.0025.0022.0027.0011.009.0010.004.002.006.006.00-6.00-3.002.002.006.001.002.005.002.00-2.00----1.003.00-3.001.002.001.001.00--------1.001.00----
...........................................................AGGGGACTGGTTAATAGAACT..................................................................................................211215.00215.001.0049.0030.0020.0016.0015.003.007.007.007.008.00-10.00--3.00-1.004.004.00-1.00-1.003.00-3.002.003.001.004.001.001.001.00--1.001.00-2.00-1.00-------1.001.001.001.00
...................................................................................................GTTCTGTTAACCCATCCCCTCA.........................................................22163.0063.0049.001.001.00----2.00--------2.00--------4.00---2.00-----2.00-----------------
...........................................................AGGGGACTGGTTAATAGAAC...................................................................................................20137.0037.00-5.0015.002.002.004.00-1.001.00-2.00----------2.001.00----------2.00-------------------
...........................................................AGGGGACTGGTTAATAGAACca.................................................................................................22CA20.0037.00-----------8.00--11.00-1.00------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTC..........................................................21120.0020.0016.00------------2.00--------1.00---------------------1.00--------
...................................................................................................GTTCTGTTAACCCATCCCCTCAT........................................................23110.0010.0010.00----------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTAA................................................................................................23110.0010.003.00-1.00-1.00---1.00-1.00----------------3.00-------------------------
...................................................................................................GTTCTGTTAACCCATCCCCT...........................................................2019.009.005.003.001.00--------------------------------------------------
.....................................................................................................TCTGTTAACCCATCCCCTCAT........................................................2119.009.002.00---5.001.00----------1.00------------------------------------
...................................................................................................GTTCTGTTAACCCATCCtctc..........................................................21TCTC8.000.008.00----------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTAt................................................................................................23T7.00294.00-1.00-1.00-1.00---3.001.00------------------------------------------
........................................CGTTTGACTCTATTGGACG.......................................................................................................................1917.007.00-5.00-2.00-------------------------------------------------
...........................................................AGGGGACTGGTTAATAG......................................................................................................1726.006.005.00---------------1.00------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTt.................................................................................................22T6.00215.00-1.00-----2.00--1.00--------------1.00-----1.00---------------------
....................................................................................................TTCTGTTAACCCATCCCCTCA.........................................................2116.006.004.001.00--------------------------------------------1.00------
..................................................................................................TGTTCTGTTAACCCATCCCCTCA.........................................................2316.006.004.00--1.00---------1.00---------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTAc................................................................................................23C5.00294.00----2.00---1.00--1.00-----------------1.00-----------------------
...................................................................................................GTTCTGTTAACCCATCCCttca.........................................................22TTCA5.000.005.00----------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAA....................................................................................................1914.004.00----------1.00-----------1.00-----------------1.00-1.00----------
...................................................................................................GTTCTGTTAACCCATCCCCTCt.........................................................22T4.0020.004.00----------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCtca..........................................................21TCA4.000.003.00----------1.00-----------------------------------------
............................................................GGGGACTGGTTAATAGAACTA.................................................................................................2114.004.00-3.00-1.00-------------------------------------------------
.......................................TCGTTTGACTCTATTGGACG.......................................................................................................................2014.004.00-3.00-----------------------------1.00---------------------
...........................................................AGGGGACTGGTTAATAGA.....................................................................................................1814.004.00-1.001.00--------------1.00----1.00------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCAa........................................................23A3.0063.002.00----------------1.00-----------------------------------
....................................................................................................TTCTGTTAACCCATCCCCTCAat.......................................................23AT3.006.00-------------3.00---------------------------------------
..........................................................GAGGGGACTGGTTAATAGAAC...................................................................................................2113.003.00----1.00------------1.00---1.00-------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCtat.......................................................24TAT3.0020.003.00----------------------------------------------------
........................................................ACGAGGGGACTGGTTAATAGA.....................................................................................................2113.003.00---1.00-1.00--1.00--------------------------------------------
...........................................................AGGGGACTGGTTAATAGAAata.................................................................................................22ATA3.004.00----1.00-1.00-1.00--------------------------------------------
.............................................................GGGACTGGTTAATAGAACT..................................................................................................1913.003.00---3.00-------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCtt........................................................23TT2.0020.00-------------2.00---------------------------------------
...........................................................AGGGGACTGGTTAATAGAACc..................................................................................................21C2.0037.00-----------1.00--1.00--------------------------------------
....................................................................................................TTCTGTTAACCCATCCCCTCAT........................................................2212.002.002.00----------------------------------------------------
............................................................GGGGACTGGTTAATAGAAC...................................................................................................1912.002.00-1.00-------------------1.00-------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCATt.......................................................24T2.0010.002.00----------------------------------------------------
........................................................ACGAGGGGACTGGTTAATAG......................................................................................................2012.002.001.00--1.00-------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCAat.......................................................24AT2.0063.002.00----------------------------------------------------
..........................................TTTGACTCTATTGGACG.......................................................................................................................1712.002.00-2.00---------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAAtta.................................................................................................22TTA2.004.001.00-------------1.00--------------------------------------
....................................................................................................TTCTGTTAACCCATCCCCTC..........................................................2012.002.00-------------------1.00------------------1.00--------------
...........................................................AGGGGACTGGTTAATAGAACcac................................................................................................23CAC2.0037.00-----------2.00-----------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCtcat.........................................................22TCAT1.000.001.00----------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCgtc.........................................................22GTC1.000.001.00----------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTttt........................................................23TTT1.009.001.00----------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCATa.......................................................24A1.0010.001.00----------------------------------------------------
............................................................GGGGACTGGTTAATAGAACT..................................................................................................2011.001.00-1.00---------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTAca...............................................................................................24CA1.00294.00--------1.00--------------------------------------------
..................................................................................................TGTTCTGTTAACCCATCCCCTC..........................................................2211.001.00-----1.00-----------------------------------------------
....................................................................................................TTCTGTTAACCCATCCCCca..........................................................20CA1.000.00----------------1.00------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTg.................................................................................................22G1.00215.00---------1.00-------------------------------------------
....................................................................................................TTCTGTTAACCCATCCCCcca.........................................................21CCA1.000.00----------------1.00------------------------------------
....................................................................................................TTCTGTTAACCCATCCCttca.........................................................21TTCA1.000.001.00----------------------------------------------------
...............................................................................TAACTAACCAGAACTATTctgt.............................................................................22CTGT1.000.00----------------1.00------------------------------------
.....................................................................................................TCTGTTAACCCATCCCCTCATt.......................................................22T1.009.001.00----------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTc.................................................................................................22C1.00215.00----------1.00------------------------------------------
.....................................................................................................TCTGTTAACCCATCCCCTCATC.......................................................2211.001.00-----------1.00-----------------------------------------
..................................................................................................TGTTCTGTTAACCCATCCactc..........................................................22ACTC1.000.001.00----------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCta........................................................23TA1.0020.001.00----------------------------------------------------
.....................................................................................................TCTGTTAACCCATCCCCTCATa.......................................................22A1.009.00----1.00------------------------------------------------
.............................................................GGGACTGGTTAATAGAACTg.................................................................................................20G1.003.00-1.00---------------------------------------------------
.....................................................................................................TCTGTTAACCCATCCCCTCA.........................................................2011.001.00-----1.00-----------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTAACT..............................................................................................2511.001.00---1.00-------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACgaa................................................................................................23GAA1.0037.00---1.00-------------------------------------------------
.........................................GTTTGACTCTATTGGACG.......................................................................................................................1811.001.00----------------------------1.00------------------------
....................................................................................................TTCTGTTAACCCATCCCCTCt.........................................................21T1.002.001.00----------------------------------------------------
..................................................................................................TGTTCTGTTAACCCATCCCCTCt.........................................................23T1.001.001.00----------------------------------------------------
....................................................................................................TTCTGTTAACCCATCCCCTCAag.......................................................23AG1.006.001.00----------------------------------------------------
............................................................GGGGACTGGTTAATAGAAat..................................................................................................20AT1.000.00---1.00-------------------------------------------------
..................................................................................................TGTTCTGTTAACCCATCCCCTaa.........................................................23AA1.000.001.00----------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACcat................................................................................................23CAT1.0037.00-----------1.00-----------------------------------------
...................................................................................................GTTCTGTTAACCCATCCCCTCAac.......................................................24AC1.0063.001.00----------------------------------------------------
........................................CGTTTGACTCTATTGGACagtt....................................................................................................................22AGTT1.000.00-1.00---------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACa..................................................................................................21A1.0037.00----1.00------------------------------------------------
.....................................................................................................TCTGTTAACCCATCCCCTCATtaa.....................................................24TAA1.009.00------------------1.00----------------------------------
....................................................................................................TTCTGTTAACCCATCCCCTaa.........................................................21AA1.000.001.00----------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAAgta.................................................................................................22GTA1.004.00--1.00--------------------------------------------------
.....................................................................................................TCTGTTAACCCATCCCCTCct........................................................21CT1.000.00---------------------------------------------1.00-------
.............................................................GGGACTGGTTAATAGAACTA.................................................................................................2011.001.00-1.00---------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCtttt..........................................................21TTTT1.000.001.00----------------------------------------------------
...........................................................AGGGGACTGGTTAATAGAACTAta...............................................................................................24TA1.00294.00---1.00-------------------------------------------------
...................................................................................................GTTCTGTTAACCCATCCtct...........................................................20TCT1.000.001.00----------------------------------------------------
GTAGTGATGAGAGTGATAATGGCCAACAGTGATTCAGAATCGTTTGACTCTATTGGACGAGGGGACTGGTTAATAGAACTAACTAACCAGAACTATTTTGTTCTGTTAACCCATCCCCTCATCTAATAGAGTATAAACCTCAATATAAGCTCAACTAGGCTGAGTAAGGCCAAACAAG
..................................................(((((((.(((((((..((((((((((((....................))))))))))))..))))))).)))))))..................................................
..................................................51...........................................................................128................................................
SizePerfect hitTotal NormPerfect NormSRR189782DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189787SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR189785SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
..............................................................................................................CCATCCCCTCATCTAATA.................................................. 1811.001.00-------------------------------------------1.00---------