| (2) B-CELL | (1) BRAIN | (17) BREAST | (13) CELL-LINE | (4) CERVIX | (1) FIBROBLAST | (8) HEART | (5) KIDNEY | (7) LIVER | (2) LUNG | (3) OTHER | (1) OVARY | (5) SKIN | (2) SPLEEN | (3) THYMUS |
| TGGGATCCTGGGGAGGGGGCTGTGGGCACCCCACTGTGCCCCAGAGTTCTGGGTGAGTTTGGGGGGCAGGGGGCAGAGGGCATCAGAGGACAGCCGCCTGGTGCCCATGCCATACTTTTGCCTCAGCCACCAGGTGCAGGTGAAGGAGGAGCCAGCAGAGGCAGAGGAAGACAGGC ..............................................................((((((((.((((..(((((((((.((....))..))))))))).))))...))..)))))).................................................... ..................................................51.........................................................................126................................................ | Size | Perfect hit | Total Norm | Perfect Norm | TAX577740(Rovira) total RNA. (breast) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | TAX577579(Rovira) total RNA. (breast) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR139214(SRX050633) FLASHPage purified small RNA (~15-40nt) from . (thymus) | TAX577738(Rovira) total RNA. (breast) | TAX577453(Rovira) total RNA. (breast) | SRR189784 | TAX577741(Rovira) total RNA. (breast) | SRR139172(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | TAX577742(Rovira) total RNA. (breast) | SRR139174(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR139173(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR139165(SRX050631) FLASHPage purified small RNA (~15-40nt) from . (heart) | SRR189785 | SRR139171(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR038857(GSM458540) D20. (cell line) | TAX577589(Rovira) total RNA. (breast) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR040024(GSM532909) G613N. (cervix) | SRR029125(GSM416754) U2OS. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | TAX577580(Rovira) total RNA. (breast) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR191485(GSM715595) 123genomic small RNA (size selected RNA from . (breast) | SRR191628(GSM715738) 52genomic small RNA (size selected RNA from t. (breast) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR191587(GSM715697) 50genomic small RNA (size selected RNA from t. (breast) | SRR139202(SRX050636) FLASHPage purified small RNA (~15-40nt) from . (spleen) | TAX577746(Rovira) total RNA. (breast) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR139167(SRX050631) FLASHPage purified small RNA (~15-40nt) from . (heart) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR040029(GSM532914) G026T. (cervix) | SRR139216(SRX050633) FLASHPage purified small RNA (~15-40nt) from . (thymus) | SRR139175(SRX050643) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR139184(SRX050632) FLASHPage purified small RNA (~15-40nt) from . (lung) | SRR139190(SRX050652) FLASHPage purified small RNA (~15-40nt) from . (lung) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | TAX577739(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577590(Rovira) total RNA. (breast) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR029126(GSM416755) 143B. (cell line) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR029130(GSM416759) DLD2. (cell line) | SRR189786 | GSM450600(GSM450600) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | TAX577744(Rovira) total RNA. (breast) | SRR139204(SRX050636) FLASHPage purified small RNA (~15-40nt) from . (spleen) | SRR139193(SRX050634) FLASHPage purified small RNA (~15-40nt) from . (ovary) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR038862(GSM458545) MM472. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR139217(SRX050633) FLASHPage purified small RNA (~15-40nt) from . (thymus) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR191615(GSM715725) 94genomic small RNA (size selected RNA from t. (breast) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................TGCCCATGCCATACTTTTGCCT..................................................... | 22 | 1 | 18.00 | 18.00 | 4.00 | 2.00 | 1.00 | - | - | - | 1.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCA................................................... | 24 | 1 | 13.00 | 13.00 | 2.00 | - | - | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCAGt................................................. | 26 | T | 12.00 | 5.00 | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | 2.00 | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCt................................................... | 24 | T | 9.00 | 7.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | 2.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTC.................................................... | 23 | 1 | 7.00 | 7.00 | 1.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCAG.................................................. | 25 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCC...................................................... | 21 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGC....................................................... | 20 | 1 | 4.00 | 4.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................CACCCCACTGTGCCCact.................................................................................................................................... | 18 | ACT | 3.00 | 0.00 | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTt.................................................... | 23 | T | 3.00 | 18.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................AGCAGAGGCAGAGGAAGAC.... | 19 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GTGCCCATGCCATACTTTTGCCTt.................................................... | 24 | T | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTa.................................................... | 23 | A | 2.00 | 18.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCa..................................................... | 22 | A | 2.00 | 4.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTG........................................................ | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGa....................................................... | 20 | A | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................CAGAGTTCTGGGTGAGTTT.................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTg......................................................... | 18 | G | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TTGGGGGGCAGGGGGggac................................................................................................... | 19 | GGAC | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCcagt.................................................. | 25 | CAGT | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CTTTTGCCTCAGCCACCAGGTGC....................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........GGGGAGGGGGCTGTGtcgg.................................................................................................................................................... | 19 | TCGG | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................GGGCAGGGGGCAGAGattg.............................................................................................. | 19 | ATTG | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCc................................................... | 24 | C | 1.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTacgg...................................................... | 21 | ACGG | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCAGa................................................. | 26 | A | 1.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................CACCCCACTGTGCCCacc.................................................................................................................................... | 18 | ACC | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTctgc....................................................... | 20 | CTGC | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................CCATGCCATACTTTTGCCT..................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTT......................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TGGGGGGCAGGGGGCtgcc.................................................................................................. | 19 | TGCC | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TGGGGGGCAGGGGGCgcgc.................................................................................................. | 19 | GCGC | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCact.................................................... | 23 | ACT | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GCAGAGGCAGAGGAAGAC.... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................AGGTGCAGGTGAAGGAGGAGCC....................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................CACCCCACTGTGCCCCct.................................................................................................................................... | 18 | CT | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................AGAGGACAGCCGCCTGG........................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................AGGTGCAGGTGAAGGAGGA.......................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTaa................................................... | 24 | AA | 1.00 | 18.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................AGAGGCAGAGGAAGAgcaa. | 19 | GCAA | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TGCCATACTTTTGCCTtag.................................................. | 19 | TAG | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTcgga..................................................... | 22 | CGGA | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................GGTGCAGGTGAAGGAGGAGCCAG..................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCAtt................................................. | 26 | TT | 1.00 | 13.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCCCATGCCATACTTTTGCCTCAt.................................................. | 25 | T | 1.00 | 13.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................GCATCAGAGGACAGCC................................................................................. | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| TGGGATCCTGGGGAGGGGGCTGTGGGCACCCCACTGTGCCCCAGAGTTCTGGGTGAGTTTGGGGGGCAGGGGGCAGAGGGCATCAGAGGACAGCCGCCTGGTGCCCATGCCATACTTTTGCCTCAGCCACCAGGTGCAGGTGAAGGAGGAGCCAGCAGAGGCAGAGGAAGACAGGC ..............................................................((((((((.((((..(((((((((.((....))..))))))))).))))...))..)))))).................................................... ..................................................51.........................................................................126................................................ | Size | Perfect hit | Total Norm | Perfect Norm | TAX577740(Rovira) total RNA. (breast) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | TAX577579(Rovira) total RNA. (breast) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR139214(SRX050633) FLASHPage purified small RNA (~15-40nt) from . (thymus) | TAX577738(Rovira) total RNA. (breast) | TAX577453(Rovira) total RNA. (breast) | SRR189784 | TAX577741(Rovira) total RNA. (breast) | SRR139172(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | TAX577742(Rovira) total RNA. (breast) | SRR139174(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR139173(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR139165(SRX050631) FLASHPage purified small RNA (~15-40nt) from . (heart) | SRR189785 | SRR139171(SRX050637) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR038857(GSM458540) D20. (cell line) | TAX577589(Rovira) total RNA. (breast) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR040024(GSM532909) G613N. (cervix) | SRR029125(GSM416754) U2OS. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | TAX577580(Rovira) total RNA. (breast) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR191485(GSM715595) 123genomic small RNA (size selected RNA from . (breast) | SRR191628(GSM715738) 52genomic small RNA (size selected RNA from t. (breast) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR191587(GSM715697) 50genomic small RNA (size selected RNA from t. (breast) | SRR139202(SRX050636) FLASHPage purified small RNA (~15-40nt) from . (spleen) | TAX577746(Rovira) total RNA. (breast) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR139167(SRX050631) FLASHPage purified small RNA (~15-40nt) from . (heart) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR040029(GSM532914) G026T. (cervix) | SRR139216(SRX050633) FLASHPage purified small RNA (~15-40nt) from . (thymus) | SRR139175(SRX050643) FLASHPage purified small RNA (~15-40nt) from . (kidney) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR139184(SRX050632) FLASHPage purified small RNA (~15-40nt) from . (lung) | SRR139190(SRX050652) FLASHPage purified small RNA (~15-40nt) from . (lung) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | TAX577739(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577590(Rovira) total RNA. (breast) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR029126(GSM416755) 143B. (cell line) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR029130(GSM416759) DLD2. (cell line) | SRR189786 | GSM450600(GSM450600) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | TAX577744(Rovira) total RNA. (breast) | SRR139204(SRX050636) FLASHPage purified small RNA (~15-40nt) from . (spleen) | SRR139193(SRX050634) FLASHPage purified small RNA (~15-40nt) from . (ovary) | SRR326282(GSM769512) Dicer mRNA was knocked down using siDicer, to. (cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR038862(GSM458545) MM472. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR139217(SRX050633) FLASHPage purified small RNA (~15-40nt) from . (thymus) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR191615(GSM715725) 94genomic small RNA (size selected RNA from t. (breast) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................gttgGTGGGCACCCCACTGT........................................................................................................................................... | 20 | gttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................ccccTGCCTCAGCCACCAG........................................... | 19 | cccc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................caggCAGGTGCAGGTGAAGGA............................. | 21 | cagg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................atGTGAGTTTGGGGGGC............................................................................................................. | 17 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................CAGAGTTCTGGGTGA........................................................................................................................ | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - |