ID: hsa-mir-4467
chr7:102111866-102112028 +
Display Libraries
(1)
AGO2.ip
(13)
B-CELL
(5)
BREAST
(27)
CELL-LINE
(2)
CERVIX
(2)
FIBROBLAST
(1)
HEART
(4)
HELA
(2)
LIVER
(1)
OTHER
(2)
RRP40.ip
(21)
SKIN
(1)
UTERUS
(1)
XRN.ip
Showing top 157 reads
CACAGCAGCTGCTGTGTTGAAAGGAGCAGCAGGGGCCTTGGCGGCAGAGGTGGTGGCGGCGGTAGTTATGGGCTTCTCTTTCTCACCAGCAGCCCCTGGGCCGCCGCCTCCCTCCCTGCCCGTATGTCTGGTCCCTGTGTCTAAGATGCTTCTTCTCTTACCC
...................................................((.(((((((((...((.(((((.((..........)).))))).)).))))))))).))....................................................
..................................................51............................................................113................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189784DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM532876(GSM532876)
G547T. (cervix)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
TAX577745(Rovira)
total RNA. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................TGGCGGCGGTAGTTATGGGCTTCT......................................................................................241220.00220.0026.0015.0016.0019.0014.0010.0016.008.0013.0017.0014.009.005.00-2.004.001.001.003.001.002.002.00-3.00--1.001.003.001.00--2.001.001.00--1.00-1.001.002.00-2.00---------------------1.00---------1.00-------
.....................................................TGGCGGCGGTAGTTATGGGCTcct......................................................................................24CCT121.0025.00121.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTC.......................................................................................231116.00116.002.0023.0014.007.0012.005.007.005.008.004.006.00-1.002.001.003.003.001.001.00--1.00-1.001.00---1.00-1.00---1.00-------2.00--1.00-------1.00-------------1.00---------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCc......................................................................................24C75.00116.0074.00---1.00------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTT........................................................................................22149.0049.002.0021.005.005.001.001.002.00-4.00-1.002.001.001.002.00---------1.00----------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCctct......................................................................................24CTCT33.005.0031.00--------1.00-------1.00-----------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTt.......................................................................................23T28.0049.001.0015.003.00-----2.00-1.00-3.00-----1.00------1.00---------------------------------1.00-----------------------
.....................................................TGGCGGCGGTAGTTATGGGCT.........................................................................................21125.0025.001.0012.00--1.001.003.00-2.001.00----1.001.00--1.00-------------------------------------1.00--------------------------
.....................................................TGGCGGCGGTAGTTATGGG...........................................................................................19118.0018.00-6.00-2.002.001.001.001.001.00----3.00-1.00-------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTat....................................................................................26AT16.00220.00--2.00-1.00-4.001.001.001.003.00-1.00------1.00-----------------------------------------------------1.00---------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTt.....................................................................................25T16.00220.00--2.004.00-1.00---1.002.001.002.00-1.00----1.00----1.00----------------------------------------------------------
..........................................................GCGGTAGTTATGGGCTTCa......................................................................................19A16.006.00-----10.00-6.00---------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtt....................................................................................26TT13.00220.002.00--2.00-----1.00-5.001.00----1.00------------------------------------------------1.00----------------
..........................................................GCGGTAGTTATGGGCTTCTt.....................................................................................20T10.002.00-----7.00-3.00---------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTcc.......................................................................................23CC10.0025.009.00--1.00-------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTtt......................................................................................24TT10.0049.001.001.00-2.001.001.00-----1.00-----1.00--------1.001.00-------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCa......................................................................................24A10.00116.001.00-1.00------3.00-1.001.00---------2.00---------------1.00--------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCctc.......................................................................................23CTC9.005.009.00----------------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTCC....................................................2218.008.00------1.00--1.00--1.00-----1.00------1.00-----------1.00-----------------1.00-------------1.00-------------
.....................................................TGGCGGCGGTAGTTATGGGCTTaa......................................................................................24AA8.0049.00--1.00-2.00-1.00-1.00-1.00-1.00-1.00--------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTat......................................................................................24AT7.0049.00-1.002.00-2.001.00-----------------------1.00-----------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTa.......................................................................................23A7.0049.00-1.002.00-----1.00----2.00------------------1.00--------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGG............................................................................................1816.006.00-2.00--1.00--------2.00------1.00--------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTac....................................................................................26AC6.00220.006.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTCT....................................................................................2616.006.006.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTat.......................................................................................23AT6.0025.00-2.001.00-------1.00------------------1.00---------1.00-------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCT......................................................................................2316.006.001.00--4.00-------------1.00-----------------------------------------------------------------
..........................................................GCGGTAGTTATGGGCTTC.......................................................................................1816.006.00-----3.00-3.00---------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTccc......................................................................................24CCC5.0025.005.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGC..........................................................................................2015.005.00-1.00-1.00---1.001.00-------------------------------------------1.00------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCct.....................................................................................25CT4.00116.004.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTttt.....................................................................................25TTT4.0049.001.002.00-----1.00---------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTcctt.....................................................................................25CCTT4.0025.004.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTatt...................................................................................27ATT4.00220.00-----------1.002.00----------1.00-----------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTta......................................................................................24TA4.0049.00----------1.00---1.00-----------1.001.00-------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTa.....................................................................................25A4.00220.00---1.00-------1.00--------1.00----1.00---------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTaat...................................................................................27AAT3.00220.00--1.001.00----1.00--------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTttc...................................................................................27TTC3.00220.003.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTa........................................................................................22A3.0025.00--1.00---------------------------------------------1.00---------1.00------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTttt...................................................................................27TTT3.00220.00---1.001.00---------------------------------------------1.00--------------------------------
.....................................................TGGCGGCGGTAGTTATGGGa..........................................................................................20A3.0018.00--1.00---1.00--------------1.00-------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTC.....................................................................................2513.003.003.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTta....................................................................................26TA3.00220.00----1.00-------1.00------1.00---------------------------------------------------------------
......................................................GGCGGCGGTAGTTATGGGC..........................................................................................1913.003.00-------3.00---------------------------------------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTT........................................................................................2112.002.001.00----------------------------------1.00-----------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTatta..................................................................................28ATTA2.00220.00----------------------2.00------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtc....................................................................................26TC2.00220.002.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTaga.....................................................................................25AGA2.0049.00-1.00-------------------1.00-------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCT......................................................2012.002.00------------------------------2.00----------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTaa....................................................................................26AA2.00220.001.00---------------1.00------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTatc...................................................................................27ATC2.00220.002.00----------------------------------------------------------------------------------
..........................................................GCGGTAGTTATGGGCTTCT......................................................................................1912.002.00------------------------2.00----------------------------------------------------------
........................................................CGGCGGTAGTTATGGGCTTCT......................................................................................2112.002.00--------------------------1.001.00-------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTtat.....................................................................................25TAT2.0049.00-----------1.00--1.00--------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGt...........................................................................................19T2.006.00-1.001.00--------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTataa..................................................................................28ATAA2.00220.00-------2.00---------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTattt..................................................................................28ATTT2.00220.00-----------1.00----------1.00------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGC........................................................1812.002.00------------1.00-----------------------------------------------------------1.00----------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtct...................................................................................27TCT2.00220.001.00----------1.00-----------------------------------------------------------------------
..........................................................GCGGTAGTTATGGGCTTat......................................................................................19AT1.000.00--------------------------------------------------------------------------1.00--------
.....................................................TGGCGGCGGTAGTTATGGGCTct.......................................................................................23CT1.0025.001.00----------------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTC.....................................................2111.001.00------1.00----------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCctt....................................................................................26CTT1.00116.00-----------------1.00-----------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTcca......................................................................................24CCA1.0025.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtac...................................................................................27TAC1.00220.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCatat...................................................................................27ATAT1.00116.00-------------1.00---------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTaaaa.....................................................................................25AAAA1.0025.00-1.00---------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGtct.........................................................................................21TCT1.006.00----1.00------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtttt..................................................................................28TTTT1.00220.00-----------1.00-----------------------------------------------------------------------
..............................AGGGGCCTTGGCGGCgggc..................................................................................................................19GGGC1.000.00----------------------------------------------1.00------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTtac.....................................................................................25TAC1.0049.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCg......................................................................................24G1.00116.00---1.00-------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGcttt........................................................................................22CTTT1.006.00-------1.00---------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTCCt...................................................23T1.008.00----------1.00------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCct........................................................................................22CT1.005.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTac......................................................................................24AC1.0049.00--------1.00--------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTttat....................................................................................26TTAT1.0049.00------1.00----------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGgt.........................................................................................21GT1.0018.00--------------------------------------1.00--------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCTCTat..................................................................................27AT1.000.00----------------1.00------------------------------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCTa.....................................................................................24A1.006.00-------1.00---------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTag.......................................................................................23AG1.0025.00-----------------------------------------------1.00-----------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCTttaa..................................................................................27TTAA1.006.00----------------1.00------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtga...................................................................................27TGA1.00220.00----------------------------------------1.00------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGa...........................................................................................19A1.006.00---------------------------------------------------------1.00-------------------------
......................................................GGCGGCGGTAGTTATGGGCTTtaca....................................................................................25TACA1.002.00-1.00---------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGgtt........................................................................................22GTT1.0018.00-1.00---------------------------------------------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCc......................................................................................23C1.001.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTCTT...................................................................................2711.001.001.00----------------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTact...................................................23ACT1.002.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTga....................................................................................26GA1.00220.00---------------------------------1.00-------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTc........................................................................................22C1.0025.00-1.00---------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTaac...................................................................................27AAC1.00220.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGgttt.......................................................................................23GTTT1.0018.00-----------------------------------1.00-----------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCTatat..................................................................................27ATAT1.006.00----------------1.00------------------------------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCTtt....................................................................................25TT1.006.00------1.00----------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTCCat..................................................24AT1.008.00-----------------------------1.00-----------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTag....................................................................................26AG1.00220.00-----------1.00-----------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTaaa.....................................................................................25AAA1.0049.00--------------1.00--------------------------------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTcct......................................................................................23CCT1.000.001.00----------------------------------------------------------------------------------
..............................AGGGGCCTTGGCGGCAG....................................................................................................................1711.001.00------------------------------------1.00----------------------------------------------
.....................................................TGGCGGCGGTAGTTATtgg...........................................................................................19TGG1.000.00----1.00------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTaaa...................................................................................27AAA1.00220.00----1.00------------------------------------------------------------------------------
..............................................GAGGTGGTGGCGGCGGaggg.................................................................................................20AGGG1.000.00-------------------------------------------------1.00---------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCcaa....................................................................................26CAA1.00116.001.00----------------------------------------------------------------------------------
....................................................................................................CCGCCGCCTCCCTCCttat............................................19TTAT1.000.00-------------------------------------------------------------1.00---------------------
.....................................................TGGCGGCGGTAGTTATGGGCTccta.....................................................................................25CCTA1.0025.001.00----------------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTCtt...................................................23TT1.001.00-------------------1.00---------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTaaat..................................................................................28AAAT1.00220.00-----------1.00-----------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTccca.....................................................................................25CCCA1.0025.001.00----------------------------------------------------------------------------------
........................................................CGGCGGTAGTTATGGGCTTC.......................................................................................2011.001.00-----1.00-----------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGcttc.........................................................................................21CTTC1.001.00-----------1.00-----------------------------------------------------------------------
..............................................................................................CCTGGGCCGCCGCCTCCCTCCC...............................................2211.001.00----------------------------------------------------------------1.00------------------
......................................................GGCGGCGGTAGTTATGGGCTTC.......................................................................................2211.001.00--1.00--------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCat........................................................................................22AT1.005.00---------------1.00-------------------------------------------------------------------
......................................................GGCGGCGGTAGTTATGGGCTTCTat....................................................................................25AT1.006.00----------------1.00------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTact......................................................................................24ACT1.0025.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCga.....................................................................................25GA1.00116.00---1.00-------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTact...................................................................................27ACT1.00220.00-----------------1.00-----------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTaaa......................................................................................24AAA1.0025.00--1.00--------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTatt.....................................................................................25ATT1.0049.00---------1.00-------------------------------------------------------------------------
.......................................................................................AGCAGCCCCTGGGCCGCtgct.......................................................21TGCT1.000.00--------------------------------------------1.00--------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTttat..................................................................................28TTAT1.00220.00-------1.00---------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTCCtat.................................................25TAT1.008.00-------------------------1.00---------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTg.......................................................................................23G1.0049.00------1.00----------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTCt....................................................22T1.001.00---------------1.00-------------------------------------------------------------------
.................................................GTGGTGGCGGCGGTAGca................................................................................................18CA1.000.00--------------------------------------------------------------1.00--------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTat....................................................22AT1.002.00------------1.00----------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtta...................................................................................27TTA1.00220.00---1.00-------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTtttt....................................................................................26TTTT1.0049.00---1.00-------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATtggc..........................................................................................20TGGC1.000.00---------------------------------------------------1.00-------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCat.....................................................................................25AT1.00116.00---------1.00-------------------------------------------------------------------------
.........................................................................................CAGCCCCTGGGCCGCCGCCTaaa...................................................23AAA1.002.00-------------------1.00---------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGtccc........................................................................................22TCCC1.006.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTtctt..................................................................................28TCTT1.00220.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTCc....................................................................................26C1.003.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTgaa.....................................................................................25GAA1.0049.00--------------------1.00--------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTgct...................................................................................27GCT1.00220.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATG.............................................................................................1711.001.00---------------------------------------------------------------1.00-------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCac.....................................................................................25AC1.00116.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTTCTCa....................................................................................26A1.003.001.00----------------------------------------------------------------------------------
.....................................................TGGCGGCGGTAGTTATGGGCTaa.......................................................................................23AA1.0025.00-------1.00---------------------------------------------------------------------------
................................................GGTGGTGGCGGCGGTtgt.................................................................................................18TGT0.500.00--------------------------------------------0.50--------------------------------------
..........................................................................................................................TATGTCTGGTCCCTGT.........................1630.330.33-----------------------------------------------------------------------------0.33-----
.................................................GTGGTGGCGGCGGTA...................................................................................................1530.330.33-------------------------------------------------------------------------------0.33---
.............................................AGAGGTGGTGGCGGC.......................................................................................................1540.250.25---------------------------------------------0.25-------------------------------------
................................................................................................TGGGCCGCCGCCTCC....................................................1580.120.12----------------------------------------------------------------------------------0.12
CACAGCAGCTGCTGTGTTGAAAGGAGCAGCAGGGGCCTTGGCGGCAGAGGTGGTGGCGGCGGTAGTTATGGGCTTCTCTTTCTCACCAGCAGCCCCTGGGCCGCCGCCTCCCTCCCTGCCCGTATGTCTGGTCCCTGTGTCTAAGATGCTTCTTCTCTTACCC
...................................................((.(((((((((...((.(((((.((..........)).))))).)).))))))))).))....................................................
..................................................51............................................................113................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189784DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM532876(GSM532876)
G547T. (cervix)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
TAX577745(Rovira)
total RNA. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..........................................ccgcGAGGTGGTGGCGGCGGT.................................................................................................... 21ccgc1.000.00----------------------------------------------------------------------------1.00------
.......................................GGCGGCAGAGGTGGTGGCGGCGGTAGT................................................................................................. 2711.001.00------------------------------------1.00----------------------------------------------
................................................................................................ccgaCCGCCGCCTCCCTCC................................................ 19ccga1.000.00----------------------------------------------------------------------1.00------------
..................................................................................................................................GTCCCTGTGTCTAAGATG............... 1811.001.00------------------------------------------------------1.00----------------------------
................................................................................................tccGCCGCCGCCTCCCTCC................................................ 19tcc1.000.00-------------------------------1.00---------------------------------------------------
.................................................................................cgctCCAGCAGCCCCTGGG............................................................... 19cgct1.000.00------------------------------------------------------------1.00----------------------
......................................................................................................GCCGCCTCCCTCCCTGCCCGTA....................................... 2211.001.00--------------------------------------------------------------------1.00--------------
.........................................................................................................GCCTCCCTCCCTGCCCG......................................... 1731.001.00------------------------------------------------------------------------------0.33-0.330.33-
.................................................................................................cgtCCGCCGCCTCCCTCC................................................ 18cgt1.000.00-------------------------------1.00---------------------------------------------------
.......................................................................................caCAGCCCCTGGGCCGCCGCCT...................................................... 22ca1.000.00-----------------------------------------------------------------------1.00-----------
.................................................................................................cggtCGCCGCCTCCCTCCC............................................... 19cggt1.000.00-------------------------------1.00---------------------------------------------------
................................................................................................acgaCCGCCGCCTCCCTCC................................................ 19acga1.000.00----------------1.00------------------------------------------------------------------