ID: hsa-mir-4457
chr5:1309375-1309542 -
Display Libraries
(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(13)
B-CELL 		(1)
BRAIN 		(9)
BREAST 		(31)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(1)
KIDNEY 		(2)
LIVER 		(1)
OTHER 		(3)
PLACENTA 		(1)
RRP40.ip 		(1)
SKIN 		(2)
THYMUS 		(1)
XRN.ip
Showing top 57 reads
AGCCACCACGCCCAGCCCAAACGTCAATTATCTTGGCATGATGACTCTTTGGAGTACTCCAGTCAATACCGTGTGAGTTAGAAAAGCTCAATTCACAAGGTATTGACTGGCGTATTCAGAAGAGTCTGGCCTCAGTAGCGGAGAAAAAACCTTCCTCGTGGATCAACC
..................................................((((((.((((((((((((.((((((((.((.....)))))))))).)))))))))))).))))))...................................................
...................................................52................................................................118................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189787SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR189786SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		GSM532874(GSM532874)
G699T. (cervix)		SRR139198(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR139199(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139169(SRX050641)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................................................TTCACAAGGTATTGACTGGCGT.......................................................221113.00113.0088.001.00--2.002.002.00-1.003.001.001.00-2.001.00---2.003.00-----1.00-1.00-1.00---------------------------------1.00------
............................................................................................TCACAAGGTATTGACTGGCGTA......................................................22154.0054.002.0012.00-6.005.00-5.002.00---4.00---1.001.003.002.00--------1.001.00--1.001.00--1.00---------1.00-1.001.00--------1.00-1.00-1.00--------
............................................................................................TCACAAGGTATTGACTGGCGT.......................................................21139.0039.0025.00--2.001.00--3.002.00-1.00----2.00-----1.00---1.00----------------------------1.00---------------
........................................................CTCCAGTCAATACCGTGTGAGT..........................................................................................22133.0033.0025.002.002.00------3.00------------------------1.00-----------------------------------
...........................................................................................TTCACAAGGTATTGACTGGCG........................................................21128.0028.0012.00--2.00--4.00---3.00--2.00------------2.00-----------------1.00--------1.00--------1.00-------
............................................................................................TCACAAGGTATTGACTGGCGTAa.....................................................23A27.0054.00-2.008.001.001.0010.00--2.00------1.00-----------------1.00-------------------------------1.00----
.........................................................TCCAGTCAATACCGTGTGAGT..........................................................................................21110.0010.002.00-8.00-------------------------------------------------------------------
...........................................................................................TTCACAAGGTATTGACTGGCGTt......................................................23T6.00113.002.00--1.00------1.00-----2.00-----------------------------------------------------
.........................................................TCCAGTCAATACCGTGTGAGTT.........................................................................................2215.005.005.00---------------------------------------------------------------------
...........................................................................................TTCACAAGGTATTGACTGGCGTA......................................................2315.005.002.00--1.00------------1.00---------------------------------------------------1.00-
............................................................................................TCACAAGGTATTGACTGGCGTAg.....................................................23G4.0054.004.00---------------------------------------------------------------------
............................................................................................TCACAAGGTATTGACTGGCGTAT.....................................................2314.004.003.00-----------1.00---------------------------------------------------------
............................................................................................TCACAAGGTATTGACTGGCGTAac....................................................24AC4.0054.004.00---------------------------------------------------------------------
............................................................................................TCACAAGGTATTGACTGGC.........................................................1913.003.00-------1.00-------1.00-------1.00----------------------------------------------
...........................................................................................TTCACAAGGTATTGACTGGC.........................................................2012.002.00-----------------------1.00--------------1.00-------------------------------
........................................................CTCCAGTCAATACCGTGTGAGTa.........................................................................................23A2.0033.002.00---------------------------------------------------------------------
............................................................................................TCACAAGGTATTGACTGGCGTt......................................................22T2.0039.00----------------------2.00-----------------------------------------------
..............................................................................................ACAAGGTATTGACTGGCGT.......................................................1912.002.00-------1.00--------------------------------------------------1.00-----------
..............................................................................................ACAAGGTATTGACTGGCGTt......................................................20T2.002.00---2.00------------------------------------------------------------------
............................................................................................TCACAAGGTATTGACTGGCG........................................................2012.002.00-----------------1.00---------------------------------1.00------------------
............................................................................................TCACAAGGTATTGACTGGCGaa......................................................22AA2.002.001.00--------------------1.00------------------------------------------------
..............................TCTTGGCATGATGACTgtac......................................................................................................................20GTAC1.000.00------------1.00---------------------------------------------------------
...........................................................................................TTCACAAGGTATTGACTGGCGTtg.....................................................24TG1.00113.00-------------------------------------1.00--------------------------------
.......................................................................................................................................TAGCGGAGAAAAAACCacac.............20ACAC1.000.00------------------------------------------------------------------1.00---
........................................................CTCCAGTCAATACCGTGTGAG...........................................................................................2111.001.00--------------------------------------------------------1.00-------------
............................................................................................TCACAAGGTATTGACTGGattg......................................................22ATTG1.000.00-----------------------------1.00----------------------------------------
............................................................................................TCACAAGGTATTGACTGGCGgat.....................................................23GAT1.002.00------------1.00---------------------------------------------------------
.......................................................................................................................................TAGCGGAGAAAAAACCaaca.............20AACA1.000.00-----------------------------------------1.00----------------------------
...........................................................................................TTCACAAGGTATTGACTGGCGa.......................................................22A1.0028.00----------------------------------------------1.00-----------------------
............................................................................................TCACAAGGTATTGACTGGCatc......................................................22ATC1.003.00-------------1.00--------------------------------------------------------
...........................................................................................TTCACAAGGTATTGACTGtcgt.......................................................22TCGT1.000.00----1.00-----------------------------------------------------------------
........................................................CTCCAGTCAATACCGTGTGggt..........................................................................................22GGT1.000.001.00---------------------------------------------------------------------
...........................................................................................TTCACAAGGTATTGACTGGCGTga.....................................................24GA1.00113.001.00---------------------------------------------------------------------
..............................................................................................ACAAGGTATTGACTGGCGTA......................................................2011.001.00-1.00--------------------------------------------------------------------
...........................................................................................TTCACAAGGTATTGACTGGCGTAa.....................................................24A1.005.00-------------------------------------------1.00--------------------------
............................................................................................TCACAAGGTATTGACTGGaa........................................................20AA1.000.00------------------------------------1.00---------------------------------
.........................................................TCCAGTCAATACCGTGTGAG...........................................................................................2011.001.00--------1.00-------------------------------------------------------------
................................................................................................AAGGTATTGACTGGCGTATTCA..................................................2211.001.00-1.00--------------------------------------------------------------------
............................................................................................TCACAAGGTATTGACTGttgt.......................................................21TTGT1.000.00------------1.00---------------------------------------------------------
............................................................................................TCACAAGGTATTGACTGGCac.......................................................21AC1.003.00-------------------------------------------------1.00--------------------
............................................................................................TCACAAGGTATTGACTGGCGa.......................................................21A1.002.00------------------------------1.00---------------------------------------
...........................................................................................TTCACAAGGTATTGACTGGCa........................................................21A1.002.00------------1.00---------------------------------------------------------
...............................................................................................CAAGGTATTGACTGGCGTATTat..................................................23AT1.000.00----1.00-----------------------------------------------------------------
AGCCACCACGCCCAGCCCAAACGTCAATTATCTTGGCATGATGACTCTTTGGAGTACTCCAGTCAATACCGTGTGAGTTAGAAAAGCTCAATTCACAAGGTATTGACTGGCGTATTCAGAAGAGTCTGGCCTCAGTAGCGGAGAAAAAACCTTCCTCGTGGATCAACC
..................................................((((((.((((((((((((.((((((((.((.....)))))))))).)))))))))))).))))))...................................................
...................................................52................................................................118................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189787SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR189786SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)		GSM532874(GSM532874)
G699T. (cervix)		SRR139198(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR139199(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139169(SRX050641)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
ttttCCACCACGCCCAGCC....................................................................................................................................................... 19tttt6.000.00--------------4.00----------------------------------------1.00----1.00---------
.......................................................ACTCCAGTCAATACCGTGTGA............................................................................................ 2114.004.00-1.00----------------------2.00---------------------------------------1.00-----
tcccCCACCACGCCCAGCC....................................................................................................................................................... 19tccc1.000.00---------------------------------------1.00------------------------------
.....................................................tTACTCCAGTCAATACCGTGTGA............................................................................................ 23t1.001.00----------------------------------------1.00-----------------------------
ccGCCACCACGCCCAGCCCAAA................................................................................................................................................... 22cc1.000.00--------------------------------------------------1.00-------------------
.................................................................................................................................................cccACCTTCCTCGTGGAT..... 18ccc1.000.00----------------------------------------------------1.00-----------------
.........................................................................................................................................tgaaAGAAAAAACCTTCCT............ 19tgaa1.000.00---------------------------------------------------------------------1.00
agtGCCACCACGCCCAGCCCAA.................................................................................................................................................... 22agt1.000.00--------------------1.00-------------------------------------------------
......................................................ataTCCAGTCAATACCGTGTGA............................................................................................ 22ata1.000.00-------------------------------------------------------------------1.00--
cacCCACCACGCCCAGCCCA..................................................................................................................................................... 20cac1.000.00------------------------------------------1.00---------------------------
tttCCACCACGCCCAGCC....................................................................................................................................................... 18ttt1.000.00----1.00-----------------------------------------------------------------
......................................................TACTCCAGTCAATACCGTGTGA............................................................................................ 2211.001.00------1.00---------------------------------------------------------------
ttttGCCACCACGCCCAGC........................................................................................................................................................ 19tttt1.000.00----------------------------1.00-----------------------------------------