ID: hsa-mir-4435-2
chr2:112078540-112078713 -
Display Libraries
(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(13)
B-CELL 		(17)
BREAST 		(49)
CELL-LINE 		(1)
CERVIX 		(5)
FIBROBLAST 		(7)
HEART 		(7)
HELA 		(1)
KIDNEY 		(2)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(21)
SKIN 		(2)
UTERUS 		(1)
XRN.ip
Showing top 111 reads
CTCCTCAGAGTAAGGCCCAATGCCACTGACTCATGGGGGAACCACAGGCAGCAAATGGCCAGAGCTCACACAGAGGGATGAGTGCACTTCACCTGCAGTGTGACTCAGCAGGCCAACAGATGCTATCAGGGAAGAGCACTAAAAACCAAAGGGTGGCTGGCTGCGTCTCAGCAT
..................................................(((..(((((.(((.((((((...(((.((((.....)))))))...)))))))))....))))).....)))...................................................
..................................................51.......................................................................124................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038854(GSM458537)
MM653. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038855(GSM458538)
D10. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189782SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR038858(GSM458541)
MEL202. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038853(GSM458536)
MELB. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................ATGGCCAGAGCTCACACAGAGG..................................................................................................2221046.501046.50287.50146.5073.5090.0088.5066.5023.5027.0015.0013.505.50--9.5012.009.5012.509.009.5010.0010.509.500.506.00-5.507.006.005.003.004.004.005.003.003.003.504.002.503.002.503.001.502.003.503.00-2.002.001.002.501.50-0.500.501.001.500.50-1.500.50-1.500.501.000.50--0.50---0.50-0.501.00-1.001.000.50-0.500.500.501.00--0.500.500.50---0.50--0.50---0.500.500.500.500.50-0.50-0.500.500.50--0.50--0.50--0.50-0.500.500.500.50---0.50---
......................................................ATGGCCAGAGCTCACACAGAGGt.................................................................................................23T102.501046.5038.5011.006.0012.508.502.504.00-0.500.50---2.500.501.00-1.50-1.500.500.50--1.00--0.50-0.500.50---0.500.50--1.00-1.501.00-0.50---0.50------0.50----------0.50----0.50----------------------0.50-----------------0.50-------------------
......................................................ATGGCCAGAGCTCACACAGAGGa.................................................................................................23A92.001046.5020.0013.0018.002.504.008.00-0.502.002.503.50--1.00-1.50-0.50-0.50-1.00--0.50--1.001.001.00---1.000.500.50-0.50-1.50--0.50-----0.50-----0.50-0.50-------0.50-------1.00-------0.50-0.50--0.50---0.50----------------------------------0.50------
......................................................ATGGCCAGAGCTCACACAGAG...................................................................................................21279.0079.0013.503.0016.508.50-2.503.00--1.001.502.50--1.500.500.501.503.000.500.500.501.502.501.001.00-0.50-0.50--0.501.000.50-0.50----0.501.00--0.50--0.50-0.50-----0.501.00----0.50----0.50-0.50---------1.00----------0.50---------------0.50-------0.50-0.50--------------
......................................................ATGGCCAGAGCTCACACAGA....................................................................................................20242.5042.508.500.50-2.002.00-1.00-2.003.006.004.50---------0.502.00-1.00-0.50-1.00----0.50---1.00-0.50--------0.50--0.50-------------1.00----0.50--0.50-0.50-----0.50---------0.50--0.50-0.50-------------0.50--------------------
......................................................ATGGCCAGAGCTCACACAGAGGG.................................................................................................23235.5035.508.505.004.003.507.003.000.50-0.50-------0.50---0.50-----0.500.50-----------0.50----------0.50---------------------------0.50----------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGG..................................................................................................21229.5029.507.001.009.00-4.00-3.001.000.501.00---0.50--0.50-----------------------------0.50----------------0.50----1.00--------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAG.....................................................................................................19226.5026.503.50---0.501.50--1.00--9.00----------6.50----------------------1.50------1.00-------------0.50-----------------0.50-------------0.50--------------------0.50-----------
......................................................ATGGCCAGAGCTCACACAGAGa..................................................................................................22A24.0079.002.50-10.001.50-1.501.00---1.50----0.500.500.50--0.50--0.50-0.50-----0.50---0.50---------------0.50-----------------0.50----------------------------------0.50--------0.50-----------------
......................................................ATGGCCAGAGCTCACACAGAGGGt................................................................................................24T21.0035.504.505.001.50-7.00-1.50-----------------0.50-----------0.50---------------------------0.50------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGatc...............................................................................................25ATC15.501046.50------------15.50----------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGtt................................................................................................24TT11.001046.502.002.501.002.50-0.500.50---------------------------0.50---0.50-------------0.50---------------------------------------------------------------------------0.50--
......................................................ATGGCCAGAGCTCACACAGAGGaa................................................................................................24AA10.001046.504.00----0.50--0.500.50----0.501.50--0.500.50-----0.50----0.50-----------0.50----------------------------------------------------------------------------------------
.....................................................AATGGCCAGAGCTCACACAGAGG..................................................................................................2326.006.000.50-3.50----------0.50------------0.50-----------------0.50--0.50-----------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGta................................................................................................24TA5.501046.500.50--0.502.50---------0.50--0.50------------0.500.50---------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGA................................................................................................2425.005.001.00-1.000.500.50--------0.50----------0.50-0.50------------------------------------------------0.50-------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAAt.........................................................24T5.002.001.50-2.001.00-------------------------------------------------------------------0.50-----------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGt..................................................................................................22T4.5079.00---2.000.50---------------0.50-----------------0.50--1.00-----------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGGt.................................................................................................22T4.5029.50----3.50-0.50-0.50--------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACA......................................................................................................1823.503.50-----------2.50----------1.00------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGtt...............................................................................................25TT3.5035.50---2.00-------------0.501.00----------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGtatc..............................................................................................26TATC3.001046.50------------3.00----------------------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGGG.................................................................................................2223.003.001.00-1.50--0.50-----------------------------------------------------------------------------------------------------------------------------
.....................................................AATGGCCAGAGCTCACACAGAGa..................................................................................................23A3.000.00----------3.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAAC.........................................................2423.003.000.50-1.00---------------------0.50----0.50------------------------------------0.50----------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGggg..................................................................................................22GGG3.0026.50-1.00--0.500.500.50-0.50--------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGat................................................................................................24AT3.001046.500.50-0.500.50--------------------1.50----------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGaaa...............................................................................................25AAA2.501046.501.50-------0.50-----------------------------------0.50--------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAACt........................................................25T2.503.00--0.502.00-------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAtagg..................................................................................................22TAGG2.503.50-0.500.50-1.00--------0.50---------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGattt...............................................................................................25ATTT2.0079.00--2.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCA...........................................................2222.002.00---1.00------------------------------------------0.50----0.50-------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAACA........................................................2522.002.00---1.00---------------------------0.50-------------------0.50-------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAG...................................................................................................2022.002.00--2.00--------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGta...............................................................................................25TA2.0035.502.00----------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGaat...............................................................................................25AAT2.001046.50-1.50------0.50--------------------------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGGGt................................................................................................23T2.003.00--1.50---------------------0.50----------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAA..........................................................2322.002.00---2.00-------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGaa.................................................................................................23AA2.0079.001.00------------------------0.50-------------------------------------------------------------------------------------------0.50-------------
......................................................ATGGCCAGAGCTCACAtag.....................................................................................................19TAG2.000.00---------------------------------------------0.50--------------1.50----------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGtaa...............................................................................................25TAA2.001046.500.50-1.50--------------------------------------------------------------------------------------------------------------------------------
..........................................................CCAGAGCTCACACAGAGG..................................................................................................1831.671.67----------1.67------------------------------------------------------------------------------------------------------------------------
....................................................................CACAGAGGGATGAGTGCACTTCAC..................................................................................2421.501.50-----------------------------------------------------1.50-----------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGaga................................................................................................24AGA1.5079.001.50----------------------------------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGGGta...............................................................................................24TA1.503.00-1.50---------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGaag...............................................................................................25AAG1.501046.501.50----------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGac................................................................................................24AC1.501046.501.50----------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGtat...............................................................................................25TAT1.501046.50---0.50-------------0.50------0.50----------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGtat..............................................................................................26TAT1.5035.50-----1.50-----------------------------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGGa.................................................................................................22A1.5029.50------1.00--------------0.50-------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGAT...............................................................................................2521.501.501.50----------------------------------------------------------------------------------------------------------------------------------
.....................................................AATGGCCAGAGCTCACACAGAGGa.................................................................................................24A1.006.00-1.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................AATGGCCAGAGCTCACACAGAGGt.................................................................................................24T1.006.000.50-----0.50----------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGtgg..................................................................................................22TGG1.0026.50---0.50-----------0.50-------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGttt...............................................................................................25TTT1.001046.500.50------------------------0.50---------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGA....................................................................................................1921.001.00------0.50-----------------0.50----------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACccag.....................................................................................................19CCAG1.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGtatt..............................................................................................26TATT1.001046.50-------------------------------------1.00---------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGaagt..............................................................................................26AAGT1.001046.50----1.00------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGagt...............................................................................................25AGT1.001046.50-----1.00-----------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGcgg..................................................................................................22CGG1.0026.50--------------0.50----------0.50---------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGGGAgt..............................................................................................25GT1.000.001.00----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................AAAGGGTGGCTGGCTGCGT........1921.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------------
..................................................................................................................................................CAAAGGGTGGCTGGCTGC..........1830.670.67------------------------0.67----------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGaatc..............................................................................................26AATC0.501046.50------------0.50----------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGtcgt..............................................................................................26TCGT0.501046.50-------------0.50---------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGc..................................................................................................22C0.5079.00---0.50-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................ACCAAAGGGTGGCTGGCTG...........1920.500.50------0.50----------------------------------------------------------------------------------------------------------------------------
.....................................................AATGGCCAGAGCTCACACAGA....................................................................................................2120.500.50--------0.50--------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAtta........................................................25TTA0.502.00---------------0.50-------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAtcgg..................................................................................................22TCGG0.503.50-0.50---------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGctg..................................................................................................22CTG0.5026.50-------------0.50---------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGttt................................................................................................24TTT0.5079.00---0.50-------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAcg..................................................................................................22CG0.5042.500.50----------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAaa..................................................................................................22AA0.5042.50---------------------------------------------------------------------------------------------------------------------------------0.50-
.............................................................................................TGCAGTGTGACTCAGCAGGC.............................................................2020.500.50---------0.50-------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAAaaa.......................................................26AAA0.502.00-----------------------0.50-----------------------------------------------------------------------------------------------------------
.............................................................................................................................TCAGGGAAGAGCACTgg................................17GG0.500.00--------------------------------------------------------------0.50--------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAtt.........................................................24TT0.502.00---0.50-------------------------------------------------------------------------------------------------------------------------------
.........................................................GCCAGAGCTCACACAGAGG..................................................................................................1920.500.50---------------------------------------------------------0.50-------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGAaaa.............................................................................................27AAA0.505.00---------------------0.50-------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAagg.................................................................................................23AGG0.5042.50---0.50-------------------------------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAGAGGta................................................................................................23TA0.5029.50--0.50--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCt...........................................................22T0.500.50--------------0.50--------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAAagt.......................................................26AGT0.502.000.50----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................GCAGTGTGACTCAGCAGGCCAtt.........................................................23TT0.500.00---0.50-------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAaagg..................................................................................................22AAGG0.503.500.50----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAAa.........................................................24A0.502.00---0.50-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCC............................................................2120.500.50---0.50-------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGgga..................................................................................................22GGA0.5026.50-----0.50-----------------------------------------------------------------------------------------------------------------------------
..............................................................................................GCAGTGTGACTCAGCAGGCCAACAGAT.....................................................2720.500.50-------------0.50---------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGatt...............................................................................................25ATT0.501046.50--0.50--------------------------------------------------------------------------------------------------------------------------------
.....................GCCACTGACTCATGGGGGcac....................................................................................................................................21CAC0.500.00-------------------------------------------------------------------------------------------------0.50---------------------------------
......................................................ATGGCCAGAGCTCACACAGAaga.................................................................................................23AGA0.5042.50----0.50------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAcagg..................................................................................................22CAGG0.503.50-----0.50-----------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACAC.......................................................................................................1720.500.50-----0.50-----------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGg................................................................................................24G0.5035.50---0.50-------------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGatat..............................................................................................26ATAT0.501046.50------------------------0.50----------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAACg........................................................25G0.503.00---------------------------0.50-------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGGtaa..............................................................................................26TAA0.5035.50---------------------0.50-------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACcgag...................................................................................................21CGAG0.500.50-------------------0.50---------------------------------------------------------------------------------------------------------------
.............................................................................................TGCAGTGTGACTCAGCAGGCCAACAG.......................................................2620.500.50------0.50----------------------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAGGata...............................................................................................25ATA0.501046.500.50----------------------------------------------------------------------------------------------------------------------------------
.....................................................AATGGCCAGAGCTCACACAGAa...................................................................................................22A0.500.50---------0.50-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................GGGAAGAGCACTAAAAAaa...........................19AA0.500.00------------------------------------------------------------------------------------------------------------------------------0.50----
......................................................ATGGCCAGAGCTCACACAGAGGGAa...............................................................................................25A0.505.00--------------------0.50--------------------------------------------------------------------------------------------------------------
......................................................ATGGCCAGAGCTCACACAGAtg..................................................................................................22TG0.5042.50-0.50---------------------------------------------------------------------------------------------------------------------------------
........................................................GGCCAGAGCTCACACAGAGG..................................................................................................2020.500.50------0.50----------------------------------------------------------------------------------------------------------------------------
.......................................................TGGCCAGAGCTCACACAG.....................................................................................................1830.330.33----------------------0.33------------------------------------------------------------------------------------------------------------
CTCCTCAGAGTAAGGCCCAATGCCACTGACTCATGGGGGAACCACAGGCAGCAAATGGCCAGAGCTCACACAGAGGGATGAGTGCACTTCACCTGCAGTGTGACTCAGCAGGCCAACAGATGCTATCAGGGAAGAGCACTAAAAACCAAAGGGTGGCTGGCTGCGTCTCAGCAT
..................................................(((..(((((.(((.((((((...(((.((((.....)))))))...)))))))))....))))).....)))...................................................
..................................................51.......................................................................124................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038854(GSM458537)
MM653. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038855(GSM458538)
D10. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189782SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR038858(GSM458541)
MEL202. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038853(GSM458536)
MELB. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.......................................................................................................................................aaaaTAAAAACCAAAGGGT.................... 19aaaa0.500.00----------------------------------------------------------------------------------------------------------------------------------0.50
................................agttGGGAACCACAGGCAG........................................................................................................................... 19agtt0.500.00---------------------------------------------0.50-------------------------------------------------------------------------------------
..........................................................................................................................................aaAAAAACCAAAGGGTG................... 17aa0.500.00-----------------------------------------------------------------------------------------------------------------------------0.50-----