ID: hsa-mir-3937
chrX:39520420-39520625 +
Display Libraries
(1)
AGO1.ip OTHER.mut
(1)
AGO2.ip
(1)
B-CELL
(4)
BRAIN
(2)
BREAST
(12)
CELL-LINE
(1)
FIBROBLAST
(6)
HEART
(1)
LIVER
(1)
OTHER
(34)
SKIN
(1)
XRN.ip
Showing top 58 reads
TAGCCCACGTAGAGAGGCCAATTAGAGAGGCCCTGAGACCGTGTGAAGAGAGAAGAATGCCCAACCAGCCCTCAGTTGCTACAGTTCCCTGTTGTTTCAGCTCGACAACAACAGGCGGCTGTAGCAATGGGGGGCTGGATGGGCATCTCAATGTGCTTCTCCCACATTGCTTCAGCCACAGTCTAATTGTAACCACATGAGAGACT
..................................................(((((((.(((((((((.(((((((((((..(((((((((((.....)).)))))))))..))))))))))).))))))))).)))))))............................................................
........................................................57.................................................................................................156................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR029129(GSM416758)
SW480. (cell line)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR139166(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..............................................................................................................ACAGGCGGCTGTAGCAATGGGG..........................................................................22111.0011.00--1.00--1.00--1.001.00--2.00--------1.00---1.001.00----------1.00----------------1.00-------
..............................................................................................................ACAGGCGGCTGTAGCAATGGG...........................................................................21111.0011.00--2.001.00---------1.00--1.00--1.00--------1.00--1.00--1.00---------1.00-------1.00---------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGGa.........................................................................23A5.0011.00---1.00-1.00----1.00---1.00------1.00----------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGG............................................................................2015.005.00------1.001.00--------------------1.00----------------1.00------------1.00---
............................................................................................................CAACAGGCGGCTGTAGCAATGG............................................................................2214.004.00--1.001.00-1.00------------1.00-------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGat.........................................................................23AT3.0011.00---------------1.00-------------------------1.00-----------1.00--------
.................................................................................CAGTTCCCTGTTGTTggga..........................................................................................................19GGGA3.000.00----3.00---------------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGa..........................................................................22A3.0011.00-----2.00---1.00----------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGGt.........................................................................23T3.0011.00-------------1.00--1.00-------------------------------1.00-------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGaa..........................................................................22AA2.005.00-------1.00--------------1.00---------------------------------------
............................................................................................................CAACAGGCGGCTGTAGCAATGGa...........................................................................23A2.004.00--------2.00-----------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGa...........................................................................21A2.005.00---------------1.00--------------1.00-------------------------------
............................................................................................................CAACAGGCGGCTGTAGCAATG.............................................................................2112.002.00---------------------------1.00-----------1.00----------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGaaa..........................................................................22AAA2.000.00------2.00-------------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGt..........................................................................22T2.0011.00--1.00----------------1.00------------------------------------------
...............................................................................TACAGTTCCCTGTTGTTggga..........................................................................................................21GGGA2.000.00----2.00---------------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAAaggg...........................................................................21AGGG2.000.00--------------------------1.00----------------------------1.00------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGaa.........................................................................23AA1.0011.00-------------------------1.00------------------------------------
............................................................................................................CAACAGGCGGCTGTAGCA................................................................................1811.001.00----------1.00---------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGaat.........................................................................23AAT1.005.00---------1.00----------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGGaat.......................................................................25AAT1.0011.00--------------------------------1.00-----------------------------
.............................................................................................................AACAGGCGGCTGTAGCAATGGG...........................................................................2211.001.00-----------------------1.00--------------------------------------
............................................................................................................CAACAGGCGGCTGTAGCAATGt............................................................................22T1.002.00----------------------------------------1.00---------------------
............................................................................................................CAACAGGCGGCTGTAGCActgg............................................................................22CTGG1.001.00----------------------------------------------1.00---------------
............................................................................................................CAACAGGCGGCTGTAGCAtatt............................................................................22TATT1.001.00-----------1.00--------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGGGa........................................................................24A1.000.00--------------1.00-----------------------------------------------
...............................................................................................................CAGGCGGCTGTAGCAATGGaaa.........................................................................22AAA1.000.00---1.00----------------------------------------------------------
............................................................................................................CAACAGGCGGCTGTAG..................................................................................1611.001.00------------------1.00-------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAAcgg............................................................................20CGG1.000.00--------------------1.00-----------------------------------------
............................................................................................................CAACAGGCGGCTGTAGCAATa.............................................................................21A1.000.00-------1.00------------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAAaggt...........................................................................21AGGT1.000.00---------------------------------------------------1.00----------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGGtat.......................................................................25TAT1.0011.00--1.00-----------------------------------------------------------
........................................................................CAGTTGCTACAGTTCCCTGTTGa...............................................................................................................23A1.000.00------------------------------------------1.00-------------------
........................................................................CAGTTGCTACAGTTCCCTGTTGT...............................................................................................................2311.001.00---1.00----------------------------------------------------------
............................................GAAGAGAGAAGAATGgaca...............................................................................................................................................19GACA1.000.00-----------------------------------------------------------1.00--
...............................................................................................................CAGGCGGCTGTAGCAATGGGGG.........................................................................2211.001.00--1.00-----------------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGGGt........................................................................24T1.000.00-----------------------------1.00--------------------------------
............................................................................................................CAACAGGCGGCTGTAGCAATGtt...........................................................................23TT1.002.00-------1.00------------------------------------------------------
............................................................................................................CAACAGGCGGCTGTAGCAATttt...........................................................................23TTT1.000.00--------1.00-----------------------------------------------------
.............................................................................................................AACAGGCGGCTGTAGCAATGG............................................................................2111.001.00--1.00-----------------------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATa.............................................................................19A1.000.00-------------------------------------------------1.00------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGtat........................................................................24TAT1.0011.00-----------------1.00--------------------------------------------
..............................................................................................................ACAGGCGGCTGTAGCAATGGGGaa........................................................................24AA1.0011.00-----------------1.00--------------------------------------------
TAGCCCACGTAGAGAGGCCAATTAGAGAGGCCCTGAGACCGTGTGAAGAGAGAAGAATGCCCAACCAGCCCTCAGTTGCTACAGTTCCCTGTTGTTTCAGCTCGACAACAACAGGCGGCTGTAGCAATGGGGGGCTGGATGGGCATCTCAATGTGCTTCTCCCACATTGCTTCAGCCACAGTCTAATTGTAACCACATGAGAGACT
..................................................(((((((.(((((((((.(((((((((((..(((((((((((.....)).)))))))))..))))))))))).))))))))).)))))))............................................................
........................................................57.................................................................................................156................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR029129(GSM416758)
SW480. (cell line)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR139166(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................CCTCAGTTGCTACAGTTCCCTGT.................................................................................................................. 23115.0015.0014.00----------------------------1.00--------------------------------
......................................................................CTCAGTTGCTACAGTTCCCTGT.................................................................................................................. 2218.008.00-8.00------------------------------------------------------------
.......................................................................TCAGTTGCTACAGTTCCCTGTTG................................................................................................................ 2314.004.00------1.00----1.00---------------1.00--------------------------------1.00-
.....................................................................aCTCAGTTGCTACAGTTCCCTGT.................................................................................................................. 23a3.008.00-----------1.00--------------------------------------------1.001.00----
...................................................................aaCCTCAGTTGCTACAGTTCCCTG................................................................................................................... 24aa2.000.00------------------------2.00-------------------------------------
.............................................................................................................................................................TCTCCCACATTGCTTCAGCCACA.......................... 2312.002.00--------------------1.00-1.00---------------------------------------
...........................................................................................................ACAACAGGCGGCTGTAGCAATGG............................................................................ 2311.001.00--------------------------------------1.00-----------------------
................................gaatGACCGTGTGAAGAGA........................................................................................................................................................... 19gaat1.000.00-------------------------------------------1.00------------------
......................................................GAATGCCCAACCAGCCCTCAGTTG................................................................................................................................ 2411.001.00--------------------------------------------------1.00-----------
...............................................................................................................CAGGCGGCTGTAGCAAT.............................................................................. 1711.001.00------------------------------------1.00-------------------------
.................................................................................................................................................................cgcCATTGCTTCAGCCAC........................... 18cgc1.000.00---------------------------------1.00----------------------------
........................................tagaGAAGAGAGAAGAATG................................................................................................................................................... 19taga1.000.00-------------------------------------------------------------1.00
..........................................................................aagcCTACAGTTCCCTGTT................................................................................................................. 19aagc1.000.00-----------------------1.00--------------------------------------
.......................................................................................................................................................................aaCTTCAGCCACAGTCT...................... 17aa1.000.00-----------------------------------------------1.00--------------
............................................................................................................CAACAGGCGGCTGTAGCAATGGG........................................................................... 2311.001.00----------1.00---------------------------------------------------
....................................................AAGAATGCCCAACCAGC......................................................................................................................................... 1711.001.00-----------------------------------1.00--------------------------